Lepisosteus oculatus (spotted gar): 102683457
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Entry
102683457 CDS
T07349
Name
(RefSeq) sodium channel protein type 4 subunit alpha-like isoform X3
KO
K04838
voltage-gated sodium channel type V alpha
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
102683457
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
loc04040
]
102683457
Ion channels [BR:
loc04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
102683457
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
GPHH
IQ
Dynamin-like_hel_bact
DUF6191
Motif
Other DBs
NCBI-GeneID:
102683457
NCBI-ProteinID:
XP_006634333
Ensembl:
ENSLOCG00000009914
LinkDB
All DBs
Position
LG9:26413373..26624576
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AA seq
1952 aa
AA seq
DB search
MATLLLPPGPDSLRRFTRESLAAIENRIAEEQARNAKQEYREDLGDVEPPKPRADLEAGK
QLPRIFGDIPSELVGVPLDDFDSYYYNNQKTFIVLNKGKAIFRFSATPALYIFSPFHPVR
RASIKILVHSLFSLFIMCTILTNCVFMAMSEPAQWAKYVEYTFTGIYTFESLIKILARGF
CIGPFTFLRDPWNWLDFSVIVMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVG
ALIQSVKKLADVMILTVFCLSVFALIGLQLFMGNLRQKCVQNITDCYHNTSTNGTNYYCK
NKTWPSYQDFISDEENYYKLEGAKDPLLCGNGSDAGRCPDGAVCLKIGKNPDYGYTSFDT
FGWAFLALFRLMTQDYWENLYHQTLRSVGKTYMIFFVLVIFLGSFYLINLILAVVAMAYE
EQNQATIAEAWQKEKEFQEAMEQLRKEQQAIVNKVQETDSVLSPEMSPFPMKDTKERRNR
KKKHKTLSEGAEDDAEDKTAKQDTEDRQRGNVFLARTLSSANRRESQCSIFNFRSRNKES
ETDFADDECSANGDNASRTGSLVIPWSRRRTSAHSTSSHCSQGNTPTLNINGKLNITVDR
NGVSSLGPPSALTLPVVMVDKVNTEDHMLNCTNETSNMLNPRRFSAAEFLEEPFQRERAL
SAASVLTNAMEELEESHQKCHPCWYRFAQHYLIWDCCPLWLKIKEWVKFGVMDPFLDLAI
TICIVLNTLFMALEHHPMTDDFNSMLSVGNLVFTGIFTAEMVFKIIALDPYYYFQQGWNI
FDSIIVSLSLMELGLSNVEGLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLT
LVLAIIVFIFAVVGMQLFGKSYQDCVCKISKDCTLPRWHMKDFFHSFLIVFRVLCGEWIE
TMWDCMEVAGQPLCILVFMLVMVIGNLVVLNLFLALLLSSFSADNLSAPDDDGEMNNLQI
AIARIQRGINWLKIAICDFFNGNFKKRRQKAKEAKAMTKLQRLGNHIEGNGTMGIIGRNG
EKYVISDGDSYMTNPNLTINVPIAPGESDVEFPEEDERSECSEDEEVKQKDEISLSEGST
VDLRKPGEEEDEFSEMAEEAMDPEDCFPEMCVRRFPCCDINTTQGVGSIWWRLRKTCYRI
VEHSWFETFIIFMILLSSGALAFEDINIEKRKVIKVILEYADKVFTYVFVLEMLLKWVAY
GFKKYFTNYWCWLDFLIVDVSLISLIANTLGYSDFAAIKSLRTLRALRPLRALSRFEGMR
VVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFGKCVSKAGYQYNASHINNRSE
CLAMNNMTLYYWTKVKVNFDNVGAGYLALLQVATFKGWMEIMYAAVDSRGLEEQPIKESN
LYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKRKLGGQDIFMTEEQKKYYNAMKKLGS
KKPQKPIPRPLNPFQGFFFDVVSKQAFDIIIMILICLNMVTMMVETDDQSKRMEDILNKI
NLAFIVIFTGECCIKIMALRCYFFTVGWNIFDFVVVILSIVGIVLADIIEKYFVSPTLFR
VIRLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMANFAYVK
KQGGIDDMFNFETFGNSMICLFQITTSAGWDSLLSPILNNSPEECDANKTHTGTNAKGDC
GNPSVGITFFVSYIIISFLIVVNMYIAIILENFSVATEESTEPLSEDDFEMFYEVWEKFD
PEATQFIEYAKLSDFADSLEEPLRIAKPNKIKLISMDLPMVSGDKIHCLDILFAFTKRVL
GESGEMDALKQQMEEKFMMANPSKISYEPITTTLRRKQEEVSAVIIQRAYRRHLLRRSMR
QASFLYRHINSDGNIDVEDPPEKEGLIASMIKENYGHETEMTETLSSTSSPPSYDSVTRA
TSDIFQVVISDPRNTDQSEPFIHPDRDRESFL
NT seq
5859 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccctgttgttaccaccgggtcctgacagcttgcgccggttcacacgtgaatcc
ctggctgctattgagaaccggattgctgaggagcaggccaggaatgccaagcaggagtac
cgagaggatcttggtgacgtggagccaccaaagccacgagccgacctcgaggccggcaag
cagctgccgcgcatctttggcgacattccttctgaactcgttggtgtgcctctggacgat
tttgactcttactactacaacaaccagaaaacttttatagtactgaacaaagggaaggcc
atcttccgatttagtgccacacctgcactgtatatttttagtcccttccatcctgtcaga
agagcatcaataaaaattttagtacactcattgttcagtctctttataatgtgcactatt
ttgaccaactgtgtgttcatggccatgtctgaaccagcacaatgggccaaatatgttgag
tacactttcactggcatttacacttttgaatcactgattaaaattctggcgagaggattc
tgcattgggcctttcacctttctgcgtgacccatggaactggctggatttcagtgttatt
gtgatggcatatgttactgaatttgtggacctgggcaatgtctcagcattaagaacattc
agagtactccgagcactgaaaactatctctgtcattccaggcttgaaaaccattgtaggt
gctctgatacagtctgtgaaaaaactggcagatgtgatgattctgacagtgttttgcctc
agtgtatttgcccttattggactccagctcttcatgggtaaccttcggcaaaaatgtgtc
caaaatattacagactgctatcataacacatcgactaatggcactaactattactgcaaa
aataagacctggccctcttaccaagacttcatttctgatgaagaaaactattataaactc
gaaggagcaaaggatcccttattatgtggaaatgggtctgatgctgggagatgtcctgat
ggagctgtttgtctaaagataggaaaaaacccagactatggctacaccagctttgacact
tttggctgggcgtttcttgctttgtttcgtctcatgacccaagattactgggaaaatctc
tatcaccagactctccgatctgtgggcaagacctacatgatatttttcgtgctggtgatc
ttcttgggctcgttctacctcatcaacttgatcctggcagtggtggccatggcttacgag
gagcagaatcaggccaccattgctgaagcttggcaaaaagaaaaggaattccaggaagcg
atggagcagctccgaaaggaacagcaggcaattgtgaacaaagttcaggagacagactca
gtcctgtcacctgaaatgtccccgtttcctatgaaagacactaaggaaagacggaacaga
aaaaaaaagcataagacgttatcagagggggccgaagatgatgcagaagataaaacagca
aagcaggacactgaagataggcagaggggtaatgtctttcttgctcggacactctcctct
gccaatcgaagggagagccagtgtagcatcttcaactttcggtcccgaaataaagaatca
gagacagattttgcagatgatgaatgcagtgcaaatggagacaatgcgagtcgcactggg
tcccttgtcattccttggtctagaaggcgaactagtgcccacagcacaagtagccactgt
tcccaaggcaacactcccactctgaatatcaacggaaagctgaatatcacagtagatcgg
aatggagtttcttctttgggacctccttctgctttaacattgcctgtagttatggtggat
aaagttaacacagaagaccacatgctgaattgcacaaatgagacaagcaacatgttaaac
cctcgcagattttctgctgcagagttcttagaggagccatttcaaagagaacgagcccta
agtgcagccagtgtgctaactaatgctatggaggaactggaagagtctcatcagaagtgt
catccttgctggtatcggtttgcacagcattatctgatttgggactgctgtcctctgtgg
ctgaaaatcaaagagtgggtgaagtttggagtgatggacccctttcttgatctagctatc
actatttgcattgtactcaacactctctttatggcattagagcaccatccaatgacggac
gatttcaacagcatgctgtctgtcgggaacttggtgttcactggaatcttcacagcagag
atggttttcaaaatcattgccctagatccctactactacttccagcagggctggaatata
tttgatagcatcattgtcagcctgagcttgatggagctgggtctctcaaatgtggaagga
ctgtcagtgttgcgttcattcagactgctgagggtcttcaaactcgcaaagtcctggccc
accttgaatacactgatcaagatcattggaaactcagtaggtgccttgggaaacctgaca
ttggttctagctatcatagtcttcattttcgctgtggtgggaatgcagttatttggaaag
agctatcaggattgcgtctgcaagatttctaaggattgcactctgccccgatggcacatg
aaagacttcttccattctttcctcatcgtctttcgggtcctgtgtggggaatggattgaa
accatgtgggattgtatggaagtggctgggcagcccctgtgcatccttgtcttcatgctg
gtcatggtgataggaaatcttgttgtgctgaatctcttccttgctttattgctgagctcc
ttcagtgcagacaacttatcagcaccggatgatgatggtgagatgaacaaccttcagata
gccattgcccgcatccagcgtggtattaactggctgaagatagccatctgtgacttcttc
aatggaaacttcaagaaaaggcggcagaaagcaaaagaagcgaaggccatgacaaagttg
caacgtcttgggaaccacatagaagggaatggaaccatgggaatcataggtcgaaatgga
gaaaagtatgtaatctctgatggcgacagctacatgactaatcccaatttgactatcaat
gttcctattgctcccggggagtcagatgtggagtttccagaggaggatgaacgaagcgag
tgctcagaggatgaggaggtcaaacagaaagatgaaatcagcctctctgagggaagtaca
gtggatctcaggaaaccaggagaagaggaggatgaattttcagaaatggctgaagaggcc
atggatccagaagactgttttcctgaaatgtgcgtgcgtcgtttcccatgctgtgatatt
aacaccacacagggagtgggcagcatatggtggaggctccgaaaaacctgctaccgaatt
gtagaacacagctggtttgaaacttttatcattttcatgatccttctcagcagtggggct
ctggcatttgaagatatcaacattgaaaaaaggaaagtcattaaagtaattctggagtat
gctgataaggtgttcacttacgtctttgttcttgaaatgctcctgaaatgggttgcatat
ggctttaagaagtatttcaccaattactggtgctggctcgattttcttattgttgatgta
tctttaataagccttatagctaacacgctggggtactcggactttgctgccatcaaatca
ctaaggaccctgagagctctcagaccattaagagccttgtccagatttgaaggcatgcgg
gttgtggtaaatgccttgattggggccatcccctccatcatgaatgtgctactggtctgt
ctgatcttctggttgatttttagtataatgggggtgaacctctttgcagggaagtttgga
aaatgtgtcagcaaagcaggttaccagtacaatgcctcccacataaacaacagaagtgaa
tgcctagcaatgaacaacatgacactgtactactggaccaaagtgaaagttaactttgat
aatgtcggagctggatatcttgcccttttacaagttgcaactttcaaaggctggatggaa
ataatgtatgctgcagtggattcacgtgggctagaagagcaacctattaaagaaagcaac
ctgtacatgtacctctactttgtcatcttcatcatctttggatcatttttcacgttgaat
ctcttcattggtgtcataatagacaacttcaaccagcaaaaaaggaagttagggggacaa
gacatctttatgacagaagaacagaagaaatactataatgcaatgaaaaaacttggatcc
aaaaaacctcagaaaccaattccaaggccactgaacccatttcaaggatttttttttgac
gttgtgtccaaacaagcctttgatatcatcatcatgattttgatctgcttgaacatggta
actatgatggtggagacagacgaccagtccaagcgcatggaggacatcctcaataagatc
aatctggcattcattgttatcttcactggggagtgctgcattaaaatcatggcacttcgc
tgctacttcttcactgttgggtggaatatctttgactttgtagtggtcatcctttcgatt
gtgggaattgttcttgctgacataatagagaaatactttgtgtcgccaacattgttccgt
gtcatcagacttgcacgcatcgggcgtgtccttcgacttatacgtggagccaaaggaatt
cgaactctactttttgccttaatgatgtctcttcctgcattattcaacattggtctttta
ctttttcttgtgatgttcatctatgccatctttggtatggcgaattttgcctatgtgaaa
aaacagggtggaattgatgacatgtttaattttgaaacatttggtaacagcatgatttgt
cttttccaaatcacaacctcagctggctgggacagtctgctcagtcccattttgaacaat
tcccctgaggagtgtgatgcaaacaaaacccacactggcactaatgcaaagggagactgt
gggaacccatcagtgggcatcactttttttgtcagttatatcattatatcatttcttatt
gttgtgaacatgtacatagccataattctggaaaacttcagtgtagctactgaggaaagc
acagagcctttgagtgaggatgactttgagatgttctatgaggtctgggaaaagtttgat
cctgaggcaacacagtttattgagtacgccaagctctccgactttgcagactctttggag
gagccactgcgcattgcaaagcccaataaaatcaaactcatctctatggacttgcctatg
gttagtggggacaaaatccactgtctggatattttgtttgctttcaccaaaagggtttta
ggggagtcaggagaaatggatgctttgaagcaacaaatggaggagaaattcatgatggcc
aacccttccaaaatatcctacgaacccattacgactaccctcagacgtaagcaagaggag
gtgtctgctgtcataattcagagagcctacaggcgtcaccttctccgaaggtcaatgagg
caagcttcctttctgtatcgtcacataaacagtgatgggaacattgatgtggaagaccct
cctgagaaggaaggtcttatagcatccatgattaaggaaaactacggacacgagacagaa
atgacggaaacattatcctcaacctcttccccaccatcttacgacagtgtaaccagagct
actagtgacattttccaagttgtgataagtgacccaaggaacactgatcaaagtgaaccc
ttcatacatcctgacagagacagggagtcatttctgtaa
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integrated database retrieval system
