Lepisosteus oculatus (spotted gar): 102683642
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Entry
102683642 CDS
T07349
Symbol
spata13
Name
(RefSeq) spermatogenesis-associated protein 13 isoform X1
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
102683642 (spata13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
loc04131
]
102683642 (spata13)
Membrane trafficking [BR:
loc04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
102683642 (spata13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
PH
SH3_1
SH3_2
SH3_9
RHG20_PH
Enolase_like_N
Motif
Other DBs
NCBI-GeneID:
102683642
NCBI-ProteinID:
XP_015196952
Ensembl:
ENSLOCG00000004477
LinkDB
All DBs
Position
LG3:5862641..5904918
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AA seq
1308 aa
AA seq
DB search
MMRVSFNVSTEKLTFTLATRPPVSWTAVQSAEETVPCNTCKAQGGGHSVQEGSELGSPEE
DSPPSTPSNKNCLHSHRNGSSHIVAPDGYPRGIADIPLIMEEGLKPPRRSHLDSGLANGV
HSQDSEMENEKRNPSKILRLFSTPRKRSSSGSEGPRSVTALGNSPTWNALSSLRKMGSFK
KLRSSVFQGIQVKEGLGVAGEEGAGGAPDEPLSNGGGASAPAAGPVEQGAGSDGSEAEDQ
DDSFLRNTHRSRSIRRAYGAGRIPLLDVRRGKAPDESPGPQGEPPEPAPDGRKVVYRRSK
STDGLNFLKKNSFKRKSTSNLMELKAAGDNHRTGRAVSASSVDALDDPPGSSERASRRWK
SPIGARDLDRVLRLVSSKTDQAVQGKESLPEGTARSSARPQSQLHDDYSRRVSSCTELDR
RRCLSFTRSPANSPPKPDAAGRRTPEPAESMDTRQPSSASEPSPCVSPDFTSPLSPLSLG
GANNEVFYPDYSCEPQSPAQFPCGTEHQQPLARPRPAAEPWSPGAGRMECGRTLRCSSRR
STLSLSSVDSDARTDGPAPKPGKSPVSFQDPARAAYYDDTNEDSGVSSQSQLSLNTPPAG
EDKKGEVAAEDRWRSSLAGDGMPRGGGAGRDRTRPRPLSDYGQLADRALSIPEDGVVEEC
GAGEARPSSAQQLWRRKRRPISVIGGVDLFAHPSPEEMEELLTQPLPRPPIPSHQVPPYR
AVSARMRPFAFSQSTPIGLDRVGRRRPMRVASTDGGAPSSTLVDDNGSEEDYSFEELAEG
SPRYLQPGGEQLAVNELIGEGTPVHAEALWDHVTLDDQELVFKAGDVIRVLDASNKDWWW
GRINDKEAWFPSSFVRLRVNQEESLGESAESTQDEEDPPPREPRHKTSEHKGQMRTNVVK
EIMNTERVYIKHLRDICEGYIKQCRKHTGMFSESQLKTIFSNIEDIYKFQRKFLKDLEKQ
YNKEEPHLSEIGSCFLLHQEGFSIYSEYCNNHPSACTELSHLMKHGKYRHFFEACRLLQQ
MIDIAIDGFLLTPVQKICKYPLQLAELLKYTTREHSDYKNISAAYEAMKNVACLINERKR
RLESIDKIAHWQVSIVNWEGPDVLGRSSELIHSGDLTRISRQGKTQQRTFFLFDHQLIFC
RKDILRRDMLYYKGRMDLDDMEVLDAEDGKDRDLNVTVRNAFKLRGRSTGEVCAFSAKKP
EDKRRWLRAFEDERKRVKEDKEMGMEITENQRKQAILNARKSRQGKLKGVAYNGCPAPPP
HQSLHPIHQRHLALPASIPQQKVFSLAEPKPKPSPFWHSFTRLAPFKK
NT seq
3927 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgggtgtcatttaacgtatcgacggaaaagttgaccttcaccttggcaacgcga
cccccggtctcctggacggcggtgcaatccgcagaagaaacagtcccctgcaacacatgc
aaggcccagggagggggacactctgtgcaggaggggtcagagttggggtccccagaggaa
gatagcccccccagtactcccagcaacaaaaactgccttcactcccataggaatgggagc
agccatattgtggctccagatggataccccagaggaatagccgatatacctctaatcatg
gaagagggcctaaaacccccaaggcgaagtcacctggacagtggtttagccaatggcgtc
cacagtcaggactcggagatggagaacgaaaagcggaacccgtccaagatcttgcgcctc
ttttccactccgcggaaaaggagcagttccggctccgaggggcctcggtccgtgacggcc
ttggggaactcccccacgtggaacgccctctcctccctgaggaagatgggctctttcaaa
aagctcaggtcgtccgtcttccagggcatccaggtcaaggagggcctcggcgtcgcgggc
gaggaaggagccgggggcgcaccggatgagccgctgtcgaacggggggggcgcctcggcc
cccgccgctggtcccgtggagcagggcgcgggttcggacggctcggaagccgaggaccag
gatgactccttcctgaggaacacgcaccgatcgcggagcatccgcagggcgtacggggcc
ggccgcatccccctgcttgacgtcaggcgggggaaagccccggacgagagccccggcccg
caaggcgagccgcccgaaccggcaccggacggccgcaaggtggtgtacaggcggagcaaa
agcaccgacggcctcaacttcctcaagaagaactctttcaagcggaagtccacgtccaac
ctgatggagctcaaggccgccggtgacaaccacaggacggggagggcggtcagcgcctcc
tccgtggacgcgctcgacgacccgcctggcagctcggagcgggcgtccagacgctggaag
agcccgatcggggccagagacttggaccgcgtgctgaggctggtgagcagcaagacggac
caggcggtgcaggggaaggagagcctcccggagggcacggcgaggagcagcgccagacct
cagagccagctgcacgatgactactcccggcgggtctccagctgcacggagctggaccgc
cgtcgctgcctgtctttcaccaggagccccgcaaactccccgcccaaaccggacgcggcg
gggcgccggaccccagaacctgccgaaagcatggacacgcggcagccctcttccgccagc
gagccctccccttgcgtgagccctgacttcacaagccccctcagccccctcagcctcggc
ggcgctaacaatgaggtcttctatcccgactacagctgcgagccacaaagccccgctcag
tttccctgcggcacagagcaccagcagcccctcgcacggcccagacccgccgctgagcct
tggagccccggcgccgggaggatggagtgtggcaggaccttgcgctgttccagccggcgc
agcacgctctccctcagctccgtggacagcgacgcgcggacggacgggccggctcccaag
cccgggaagagccccgtgtcgttccaggatccggcgcgcgcggcgtactacgacgacacg
aacgaggacagcggggtcagcagccagtcgcagctgagcctcaacaccccgcctgcggga
gaggacaagaaaggggaggtggccgccgaggacagatggcgaagctcgttggctggcgac
gggatgccgaggggcgggggcgcgggccgggacaggacgcggcctcggcccctgtcggat
tacggccagctggcggaccgggcgctgtccatccccgaggacggcgtggtggaagagtgc
ggcgccggggaggcccggcccagctccgcgcagcagctgtggcgccggaagcgtcggccc
atctccgtaattgggggggtcgacctcttcgctcaccccagcccggaggagatggaggag
ctgctcactcaacccctcccgagaccccccatcccgtcccaccaggtgcctccttacagg
gcggtgtcggcccggatgcgcccgttcgccttctcccagagcacacccatcgggctggac
cgggtcggccgcaggagaccaatgagagtggccagcacggacgggggggccccgtcctcc
acgctggtggacgacaatgggagcgaggaagactacagcttcgaggagctggccgagggc
agccctcggtacctgcagcctggcggggagcagctcgcagtcaacgagctgataggcgag
ggcacgccggtccacgcggaggcgctgtgggaccacgtcaccctggacgaccaggagctg
gtgttcaaagcgggagacgttatccgcgtgcttgatgcttccaacaaggactggtggtgg
ggaaggatcaacgacaaagaggcctggttcccttccagctttgtcagactcagggtcaac
caggaggagtcgctgggcgaaagcgcagagagcacccaggacgaagaggaccccccgccc
agggagccccgacacaagacctcggagcacaagggccagatgaggaccaacgtcgtcaag
gagatcatgaacaccgagcgcgtctacatcaagcacctgagggacatctgcgagggctac
atcaagcagtgtcggaagcacacaggaatgttcagcgagagccagttgaagactattttt
agcaacattgaggacatctacaaattccagaggaagttcttaaaggacttggagaagcag
tacaacaaagaagagcctcacctgagtgaaataggctcctgcttcctgctgcatcaagaa
ggcttctcaatctattcagagtactgtaataatcaccccagtgcctgcactgagctctct
cacttaatgaagcacggcaaataccgccatttctttgaggcctgccgtctcctgcagcag
atgattgatattgctatcgatggtttcctgctcactcccgtgcagaagatctgcaaatac
cccctgcagctagcagagctgctgaagtacacgacgcgcgagcacagtgactacaagaac
atctccgctgcctacgaggcgatgaaaaacgtcgcttgcctcatcaatgaaaggaagagg
aggctagagagcatagacaagatcgcgcactggcaggtctctatcgtcaactgggagggg
ccggacgttttaggccgcagctctgaactgatccacagtggagacctgaccaggatctcc
aggcaggggaagacgcagcagagaaccttcttcctgttcgaccaccagctcatattctgc
cggaaggacatcctgcgcagggacatgctctactacaaggggcgcatggacctggacgac
atggaagtcctggacgcggaagacggcaaggacagggacctcaacgtgaccgtgaggaac
gccttcaagctccgcggccggtccacgggcgaggtgtgtgccttctccgccaagaagccg
gaggacaagcgtaggtggctgcgggccttcgaggacgagaggaagagggtgaaggaggac
aaggaaatgggaatggaaataaccgaaaaccagaggaaacaagccattctgaatgctcga
aagtcaagacaaggaaagctgaaaggcgtggcctacaacgggtgccctgcgccccctccg
caccagtccctgcacccaatccatcagcggcacctcgccttgcccgccagcattccgcag
cagaaggtcttctccctggcggagcccaagccgaagccttcgccgttctggcacagtttc
acacggctcgccccgttcaagaagtga
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