Lepisosteus oculatus (spotted gar): 102683725
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Entry
102683725 CDS
T07349
Symbol
colgalt1
Name
(RefSeq) procollagen galactosyltransferase 1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc00310
Lysine degradation
loc00514
Other types of O-glycan biosynthesis
loc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
102683725 (colgalt1)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
102683725 (colgalt1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
loc01003
]
102683725 (colgalt1)
Enzymes [BR:
loc01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
102683725 (colgalt1)
Glycosyltransferases [BR:
loc01003
]
O-Glycan biosynthesis
O-linked Gal type
102683725 (colgalt1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_tranf_2_4
Glyco_transf_25
Anp1
CAP59_mtransfer
MT-A70
Motif
Other DBs
NCBI-GeneID:
102683725
NCBI-ProteinID:
XP_006631559
Ensembl:
ENSLOCG00000008543
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All DBs
Position
LG6:complement(17575889..17614762)
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AA seq
608 aa
AA seq
DB search
MFRLPFLLPALLSLLIPGPARGYFPEERWSPESPLLAPRVLLALICRNSAHSLPHFLATI
ERLNFPKDRIALWVATDHNSDNTTAILREWLIKVQTYYHYVEWRPQEEPQAYEDEAGPKH
WTNLRYEHVMKLRQAALEAAREMWADYFLIVDCDNLLTNPEVLWKLITENKTIVAPMLES
RAAYSNFWCGMTTQGYYKRTPAYMPIRKQERQGCFAVPMVHSTFLIDLRKEASRELAFYP
PHPDYTWAFDDIIVFAFSAKMADIQMFLCNRESYGFFPVPLRSHGTLQDETDSFLHTMLE
VMVRNPPIEPSQFISVPPKNPDKMGFDEIFMINLKRRKDRRDRMLQTLHEQEIACKVVPA
VDGKALNVSDIHNMGIHMLPGYSDPYHGRPLTKGELGCFLSHYNIWKEIVDRGLETSLVI
EDDLRFEVFFKRRLQNLMYEVQSEGLDWDLIYIGRKRMQVDHPEKAVPNIHNLVEADYSY
WTLGYVMSLQGARKLLEAQPLTKMLPVDEFLPVMYNKHPVSDYMEQFEKRDLKAFSAEPL
LVYPTHYTGDPGYVSDTETSTIWDNEQVKTDWDRAKSQKTQEQAELSSEAQNSDVLQSPL
DSTARDEL
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgttccggctcccctttctgctgcctgccctgctctcgcttctcatccctgggccggcc
cgaggatatttccccgaagagcgctggagccccgagtccccgctgctcgcacccagggtg
ctcctcgctctcatctgccgcaactcggctcactccctgccgcacttcctggcgactata
gagcgcctcaactttcccaaagaccggattgccctgtgggtggcaaccgaccacaattcg
gacaacacaacagcaatcctgcgtgagtggctcatcaaggtgcagacctactaccactat
gtggagtggagaccgcaggaggagccacaagcttatgaggatgaggcagggcccaaacac
tggactaacctgcgctatgaacacgtgatgaaactgagacaggctgcgcttgaggcagca
agagaaatgtgggctgactacttcctgattgtagactgtgacaacctcctgacaaaccct
gaggtcctgtggaagttgatcactgaaaacaagaccatcgtggctcccatgcttgagtcc
agagctgcctactccaacttctggtgcggcatgactacgcagggttactacaagcgcacc
ccggcctacatgcccatccggaagcaggagagacagggctgcttcgctgttcccatggtg
cactccaccttcctcattgacctgcgcaaagaggcgtcccgtgaactggccttctacccc
cctcaccccgactacacctgggcctttgacgacataatcgtctttgctttctctgcaaaa
atggcagacattcagatgtttctgtgcaacagagaaagttatgggttcttcccagttccc
ttgcggtcacacggcactctgcaggatgagacggacagcttcctacacaccatgctggaa
gtcatggttcgaaacccacctatagagccctctcagttcatctccgtaccccccaaaaac
ccagacaagatgggctttgacgagatcttcatgatcaacctgaagaggaggaaggaccgc
agagacaggatgttgcagactctgcacgagcaagagattgcctgcaaagtggttcctgct
gtggatggcaaagctctgaatgtcagtgatatccacaacatgggcattcacatgctgcca
gggtacagtgacccctaccacggccgtccactcaccaagggggagctgggctgcttcctc
tcccactacaacatctggaaggagatcgtggaccgtggtctggaaacatctctcgtgatc
gaggacgacctgcggttcgaggtgttcttcaagagacgtcttcagaacctcatgtatgag
gtgcagagtgaaggcctggactgggacctcatttacatcggccgcaagcgcatgcaggtg
gatcaccccgagaaagcggtgcccaacatccacaacctggtagaggctgactactcctat
tggaccctgggctacgtgatgtcactgcagggcgcacgcaagctgctggaggcgcagccc
ctcaccaagatgctgcccgtggatgagttcctgccggtcatgtacaacaagcatccagtg
tcggactacatggagcagtttgagaagagggacctcaaagcattttccgccgagcccttg
ctggtctatcccacgcactacacgggcgatcccggttatgtcagcgacacggagacctcc
accatctgggacaacgagcaggtgaaaacggactgggacagggccaagtcccagaagaca
caggagcaggcagagctgagcagcgaagcccaaaattccgacgtcctccagtcgcccctg
gatagcacagcccgggatgagctatga
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