Lepisosteus oculatus (spotted gar): 102684146
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Entry
102684146 CDS
T07349
Symbol
rab40b
Name
(RefSeq) ras-related protein Rab-40B
KO
K07928
Ras-related protein Rab-40
Organism
loc
Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
loc04121
]
102684146 (rab40b)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
loc04031
]
102684146 (rab40b)
Ubiquitin system [BR:
loc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
102684146 (rab40b)
GTP-binding proteins [BR:
loc04031
]
Small (monomeric) G-proteins
Rab Family
Rab40
102684146 (rab40b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
SOCS_box
Arf
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
102684146
NCBI-ProteinID:
XP_015212165
Ensembl:
ENSLOCG00000012215
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All DBs
Position
LG10:complement(33072074..33121861)
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AA seq
279 aa
AA seq
DB search
MTNKGSPARAYDFLLKFLLVGDSDVGKGEILASLQDGASESPYGYNMGIDYKTTTILLDG
RRVKLQLWDTSGQGRFCTIFRSYSRGAQGVILVYDITNRWSFDGIDRWIKEIDEHAPGVP
KILVGNRLHLAYKRQVTTEQAQVYAERLGITFFEVSPLCNFNITESFTELARIVLMRHGM
ERLWKPNKVLSLQDLCCRAIVSCTPVHLVDKLPLPVALKSHLKSFSMANGLNARMMHGRS
YSLTTSHSSNKRTSLKKTKIIRPPQSPSQSCTRNSCKIS
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgaccaacaagggtagtcccgcaagggcttacgactttctgctcaagtttctgctggtc
ggagacagcgacgtcggaaaaggagaaatcttggcgagtttacaggacggagccagcgag
tctccttatggatacaacatgggaattgattacaagacaacaactatcttgttagatgga
cgaagggttaaactacagctctgggacacatctggccaggggcgattctgcaccatattt
cgctcgtactccagaggagcccagggggtaatccttgtatatgacatcaccaatcgctgg
tcctttgatggaattgacaggtggatcaaagaaattgatgagcatgccccaggcgtgccc
aagatcctagtgggaaataggctgcacctggcctacaagagacaggtgacgacggagcag
gcccaggtgtacgcagagcgcttgggtatcactttcttcgaagtcagtcctctgtgtaac
ttcaacatcaccgagtccttcactgagcttgcacggattgtgctcatgaggcatggcatg
gagcgcctctggaagccaaacaaagtgttgagcctgcaagacctttgctgccgtgccatt
gtctcctgcactccagtccacctggtggacaagctccccctccctgttgccttaaagagc
cacctcaagtccttctccatggctaacggtttgaatgcccggatgatgcatggacgctcc
tactccctcaccaccagccacagcagcaacaagaggactagcctgaagaaaaccaaaatt
atccgtcccccccagagcccctcgcagagctgcaccaggaacagctgtaagatttcctag
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