Lepisosteus oculatus (spotted gar): 102684157
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Entry
102684157 CDS
T07349
Symbol
gpc1
Name
(RefSeq) glypican-1 isoform X1
KO
K08107
glypican 1
Organism
loc
Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
loc00535
]
102684157 (gpc1)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
loc00537
]
102684157 (gpc1)
Proteoglycans [BR:
loc00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
102684157 (gpc1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
loc00537
]
Others
102684157 (gpc1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glypican
Fz
Motif
Other DBs
NCBI-GeneID:
102684157
NCBI-ProteinID:
XP_006637812
Ensembl:
ENSLOCG00000005673
LinkDB
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Position
LG14:10463643..10551256
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AA seq
547 aa
AA seq
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MDLRLSFFFCFLATPIVGENTSGKARSCSDVRQFYSGKGFHLVGVPQTEISGEHLRICPQ
GYTCCTSEMEESLSTLSRREFEGLVKEAGHSLQLSLTTQYKSFDGYFLDLLNQSERSLQD
SFPAVYGELYTQNARLFKDLYAELRRYYRGSNINLEEVLNEFWVRLLERLFKAQNPQYVF
GDEYLECAVKQTETLRPFGDVPRELKLKATRAFIAARSFVQGLGVSSEVVRKVSQVPLSP
ECTRALMKLMYCPHCRGMPSVKPCINYCRNVMKGCLANQADLDTEWRNLIESMLQVADRF
NGPSSVEVVIGSIHTRISEAMVNMLDNSAHFTSKVFQACGTPRVGGTQVSGSEDKKKRGK
SPVDEKAGLGLEKLVSDVTGKLREMQQYWVQLPNALCTDKVSAAPASEDKCWNGMSRASY
LPEVMGDGLASQINNPEVEIDITKPDMTIRQQIMQLKIMTNRLRNAFNGNDVDFQDTSDD
VSGSGSGACVEELCPRSTDRNTIPNTDQPIQYAIPAENKKVVKGTASQALPHSTLLLLSL
AVVLFRR
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggatttgcgactgagtttcttcttttgctttctcgccactccgattgtcggggaaaac
acaagcggtaaagcccggagttgttcggatgtccgacagttttacagcggcaagggcttt
cacttggtcggagtcccccagactgaaatatcgggcgaacacctgcgaatctgcccccag
ggctacacctgttgcaccagtgagatggaggagagtttgtccaccctgagccgccgcgaa
ttcgagggactagtgaaggaggccggccactcactgcagctctccctcaccactcagtac
aagagctttgatggatacttcctggatttgctgaaccagtcagagcgctctctgcaggac
tcttttccagcagtgtacggggagttgtacacgcagaacgcccgcctcttcaaggacctg
tatgccgagctgcggcgctactaccgcggctccaacatcaacctggaggaggtgctcaac
gagttctgggtgcggctcctggagaggctcttcaaggcccagaacccccagtacgtcttc
ggtgacgagtacctggagtgcgccgtgaagcagacggagacgctgcggccattcggcgac
gtgccccgcgagctgaagctgaaggccacgcgcgccttcatcgctgcccgctccttcgtc
cagggcctgggggtcagcagtgaggtggtgcgcaaggtctcccaggtcccactcagccct
gagtgcacccgtgccctcatgaagctgatgtactgtccgcactgcagaggaatgccttcc
gtgaagccgtgcatcaactactgcaggaatgtcatgaagggctgccttgccaaccaagca
gacctggacactgagtggaggaacctcattgagtccatgctccaggtggctgaccgtttc
aatggaccgtccagcgtggaggttgtcatcggttccatccacaccaggatctcagaggcc
atggtcaacatgctggataacagtgcacacttcaccagcaaggtgttccaggcctgtggg
acccccagagtaggaggcacccaggtctctgggtctgaggacaagaagaaacgtgggaaa
agtcctgtggatgaaaaggctgggctgggcttggagaaacttgtgtctgatgtgactggt
aagctaagggagatgcagcagtactgggtacagctgcccaatgctctttgtactgacaag
gtttctgcagcaccagccagtgaggataaatgctggaatggcatgtccagggcaagttat
ctccctgaagtgatgggtgatggcctggccagccagatcaacaaccccgaggtggagatt
gacatcaccaagccagacatgaccatccgccagcagatcatgcagctgaaaatcatgacc
aatcggttgcgcaatgccttcaacggcaatgacgtggatttccaggacactagtgatgat
gtcagtggctcgggaagtggcgcctgcgtagaggaattgtgcccccgtagcacagatcgc
aacaccatccccaacacagaccaaccgatacagtacgccattcctgccgagaacaagaag
gtcgtcaagggcacagccagccaagcccttccccactccaccctcctcctgctctcattg
gctgtggtgcttttcaggcggtaa
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