Lepisosteus oculatus (spotted gar): 102684216
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Entry
102684216 CDS
T07349
Name
(RefSeq) elongation factor 1-alpha 1-like
KO
K03231
elongation factor 1-alpha
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102684216
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
loc03019
]
102684216
03016 Transfer RNA biogenesis [BR:
loc03016
]
102684216
03012 Translation factors [BR:
loc03012
]
102684216
04131 Membrane trafficking [BR:
loc04131
]
102684216
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
loc04147
]
102684216
Messenger RNA biogenesis [BR:
loc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
102684216
Transfer RNA biogenesis [BR:
loc03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
102684216
Translation factors [BR:
loc03012
]
Eukaryotic type
Elongation factors
102684216
Membrane trafficking [BR:
loc04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
102684216
Exosome [BR:
loc04147
]
Exosomal proteins
Proteins found in most exosomes
102684216
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Motif
Other DBs
NCBI-GeneID:
102684216
NCBI-ProteinID:
XP_006634422
Ensembl:
ENSLOCG00000011245
UniProt:
W5MZL6
LinkDB
All DBs
Position
LG9:complement(32896082..32899852)
Genome browser
AA seq
459 aa
AA seq
DB search
MPKDRVHINLVIIGHVDSGKSTTTGHLVYKCGGVDPRTIEKFEKTASQMGKGSFKYAWIL
DKLKAERERGITIDISLMKFNTHKFYITIIDAPGHRDFIKNMITGTSQADAALLVVSAAR
GEFEAGISRNGQTREHALLAYTLGVKQLIVCVNKMDVTEPPYSQKRFDEVVRNVTIYVKK
IGYNPTAVPFVPVSGWAGENMLTPSNKMPWFKGWKIKRKEGNANGKTLLEVLDSILPPVR
TVNKPLRLPLQDVYKIGGIGTVPVGRIETGILKPGMMVTFSPARLTAEVKSIEMHHQGLQ
TALPGHNIGFNIKNVSVKNLRRGDVAGNAQHDPPSDVSSFVAQVIILNHPGKIKAGYSPV
VDCHTAHISCKFAELREKLDRRSGQKLEDDPQVLVSGDAATVNLVPNKPMCVESFFNYPP
LGRFAARDLRQTIAVGVIKSVEKVNGNPKKSVQKTQSLK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaggatagggttcatattaaccttgtgatcattggtcatgtggatagtggaaaa
tccactaccactggtcacctcgtttataaatgtggcggagtagaccccaggactatcgag
aagttcgagaagactgcaagccagatgggaaagggctcgtttaaatacgcctggattctg
gataaactgaaggcggagagagagagaggcatcaccatcgacatctcgttaatgaagttc
aatactcacaaattctacattaccatcatcgacgcaccgggacatcgcgatttcatcaaa
aacatgatcaccggaacatcgcaggctgatgctgcgctcctagtggtctctgcggccaga
ggcgaatttgaggctggtatttccaggaatggccagacaagggaacatgctttgctggct
tacacgctgggtgttaagcagctcattgtctgcgtcaacaaaatggatgtgacggagccc
ccttacagccagaagcgcttcgatgaggtggttcgcaatgtgaccatctacgtgaagaaa
ataggctataaccctacagcagtgcccttcgtgccagtttctggatgggctggagagaac
atgctgactccctccaataagatgccttggtttaaagggtggaaaattaaacggaaggaa
ggcaatgcaaatggcaaaaccttacttgaagtcctggactcgattctgcccccagtgcgc
acagtcaacaaacccctgaggttgcccttacaggatgtttataagataggaggtattggt
actgtaccagtaggaagaattgagacggggatattgaagccagggatgatggtgaccttc
tcgcctgcgagacttactgcagaggttaagtcgatagaaatgcatcaccaaggcctccag
actgctctccctgggcacaatataggcttcaacatcaagaatgtttcggtgaaaaatctg
cggcgtggggacgtggcggggaatgctcagcatgaccctccctctgatgtctccagcttt
gttgcacaggttatcattttgaaccatcctggcaagatcaaagcaggctactctccagtt
gtcgactgccacacagcccacatcagctgcaagtttgcggagctgagggagaagcttgac
cggaggtctgggcagaaactcgaagatgaccctcaggtcctggtatctggagatgccgct
actgtcaacctggtaccaaacaagccaatgtgtgttgagagcttcttcaattatcctcct
ttaggtcgttttgctgccagggacctgaggcagaccattgcagttggggtcatcaaatcg
gtagagaaggtcaatgggaacccaaagaaatctgtccagaaaacccaatcccttaaataa
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