Lepisosteus oculatus (spotted gar): 102684222
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Entry
102684222 CDS
T07349
Symbol
spopl
Name
(RefSeq) speckle-type POZ protein-like
KO
K10523
speckle-type POZ protein
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
102684222 (spopl)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
loc04121
]
102684222 (spopl)
Ubiquitin system [BR:
loc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
102684222 (spopl)
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Motif
Pfam:
MATH_2
BTB
BACK_BPM_SPOP
MATH
BTB_2
BTB_KLHL33
Motif
Other DBs
NCBI-GeneID:
102684222
NCBI-ProteinID:
XP_006636286
Ensembl:
ENSLOCG00000001012
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Position
LG12:765353..783658
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AA seq
392 aa
AA seq
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MSGVPTPPPPGEMSSGPVAESWCYTQVKVVKFSYMWTINNFSFCREEMGEVLKSSTFSSG
PNDKMKWCLRVNPKGLDDESKDYLSLYLLLVSCPKSEVRAKFKFSLLNAKREETKAMESQ
RAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQSNMNMLK
VPECRLSDDLGNLWECSRFTDCSLHVGGQEFKAHKSILAARSPVFNAMFEHEMEESKKNR
VDINDVDPDVFKEMMRFIYTGKAPNLEKMADNLLAAADKYALERLKVMCEEALCSSLSVE
NVADILILADLHSAEQLKAQAIDFINRCSVLRQLGCKDGKTWNSNHATDIMETAGWKSMI
HSHPHLVAEAFRALASAQCPPFGIPRKRLKQS
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggggtccccaccccccctccccctggagagatgtccagtggacctgtggcagaa
agctggtgttacacacaggttaaagtagtgaagttttcctacatgtggaccataaacaac
tttagtttttgtcgagaggagatgggggaagttctgaagagttccactttttcctctgga
cctaatgataaaatgaaatggtgcctgagagtaaacccaaagggactggatgatgaaagc
aaagactatttgtcattgtatttactgctagttagttgtcccaaaagtgaagtaagagca
aagttcaagttctctttgttgaatgcgaagagagaagaaactaaagctatggaaagccaa
agagcgtatcgatttgtccaagggaaggactggggtttcaaaaaatttattaggagagat
tttctgcttgatgaagcaaatggacttttaccagatgacaagcttacattgttctgtgag
gtaagcgtggtccaagattcagtgaatatttccggtcagtccaatatgaacatgttgaag
gttcctgaatgccgcttgtcagatgacttaggaaatctttgggagtgctcgcgattcaca
gactgcagcctccacgtaggaggacaggagttcaaagctcacaaatccatattagcagca
cgatcacctgtttttaatgccatgtttgaacatgaaatggaggaaagtaaaaagaatcga
gtagatataaatgatgttgaccctgatgtgtttaaggagatgatgaggttcatttacaca
ggaaaagcaccaaatcttgagaagatggctgacaacttgttagcagcagcagataaatat
gctttggagcgcctaaaggtcatgtgcgaagaagctttgtgtagcagcctctctgtagaa
aatgttgcggatatacttattctggcagatttgcacagcgccgagcagttgaaagcacaa
gcaatagacttcatcaacagatgcagtgtcctaagacaactgggctgcaaagatggaaag
acttggaacagcaatcatgcaacagacatcatggaaactgcaggctggaaatcgatgatc
cactcccaccctcacttagtcgcagaggccttccgagccctggcgtctgcacagtgtcct
ccttttggcattccacgcaagcggctaaaacagtcataa
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