Lepisosteus oculatus (spotted gar): 102684266
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Entry
102684266 CDS
T07349
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1-like isoform X2
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102684266
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
loc03019
]
102684266
Messenger RNA biogenesis [BR:
loc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
102684266
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
TSX
Motif
Other DBs
NCBI-GeneID:
102684266
NCBI-ProteinID:
XP_006633073
Ensembl:
ENSLOCG00000015223
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Position
LG7:47143756..47155068
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AA seq
532 aa
AA seq
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MATEVGTSAPSSIAHPGVEPEEDEEHWLYGDENSEKQPGDPAPGFPDSTQESHVSSSEDK
DTADQVAQSGEDEDEEDSDSDSDEDDVKVTIGNIKTGAPSYMATPMNLSLKTGRGYGAAA
TAKLQPKGVDLEATGNINGLPALEADPDSFEDKPWRKPGADLSDYFNYGFNEDTWKAYCE
KQRRLQLGLDPAGPAATENKITVQQGRMPVLEKDVDLAAIKPEFKADFPPTPVPLPPGRV
KAGPPPNRKLGGTIDVIGGQTGAIRRVEGRRREKHASDENPIQVLGDHGNKSQAFAPQAG
PPPPPIGAPPPHFLHPPPPVTSVPPPLHPPGIPPPAIPGLFPPPMAPPPALLMPPLDGCP
TSAYGSRPPPPFGYSSGDSSFVSYPPISTSLTPWVTSVEKGSSGAGSAGHWEYQGSRRDR
ERERDRTPTTSEYSNEDERYRYYSRERSCEYEREYHHGRERSREREERHRERRHRDKEDG
SKHKSSRRKQHDGEEGESHRRHKHKKNKRSKEDKEAAEDGAGEGEEPDSKEQ
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggcgactgaggtgggtacttcagccccgagctcgatagcacatcctggggtcgagccc
gaggaggatgaggaacactggctatacggggatgagaactctgagaagcaacccggagac
ccggcgccaggattcccggattccactcaggaaagtcacgtcagcagctcggaggacaag
gacaccgcagaccaggttgctcagagcggcgaggatgaggatgaggaagacagtgacagt
gacagcgatgaggatgacgtcaaggtcaccattggcaacatcaaaacaggagcaccgtca
tacatggcaacaccgatgaacctcagtctgaaaacgggacggggatacggagcagctgct
accgccaagctgcagccgaagggagtggacctggaggccaccgggaacatcaacgggctg
ccggcgctggaggcggaccctgactccttcgaggacaagccctggaggaagccaggcgcg
gacctctcggattatttcaactacggcttcaacgaggacacgtggaaggcgtactgcgag
aagcagcgcaggctgcagctgggcctggacccggccggccctgccgccacagagaacaag
atcacggtccagcaggggaggatgccggtgttggagaaggatgtggacctggccgccatc
aaacccgagttcaaagccgacttcccccccactcccgtccccctgccccccggcagggtc
aaggctgggccaccccccaacaggaagctggggggcaccatcgacgtgatcggagggcag
acgggggccattcgaagggtggaaggcaggcggagagagaagcacgcttccgatgagaac
cccatccaggtcctgggggaccatggcaacaagagccaggcgtttgctccccaggcagga
ccccccccaccccctatcggggcccccccaccgcatttcctccacccccctccacccgtc
accagcgtgccgccgcctctccaccccccgggtatccctccaccagccattccaggcctg
ttccccccaccgatggctccccccccagccctgctcatgccccccctggacgggtgcccg
acctccgcctacggcagccgaccccctcctcccttcggctacagctccggggactccagc
ttcgtcagctaccctcccatctcgacctcgctcacgccttgggtcacctcggtggagaag
ggcagcagtggcgcgggcagcgcgggacactgggagtaccagggctctcggagagaccgg
gagcgggagcgagatcggacccccaccaccagcgagtacagcaacgaggacgagcgctac
cgctactacagccgcgagcggagctgcgagtacgagcgggagtaccaccacggccgggag
cgcagccgcgagcgggaggagcggcaccgcgagcgccggcaccgcgacaaggaggacggg
agcaagcacaagtcctcccgccggaaacagcacgacggcgaggagggagagagccaccgc
agacacaagcacaagaagaacaagcgcagcaaagaggacaaggaggccgccgaggacggg
gcgggggaaggggaggagccagacagcaaggagcagtga
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