Lepisosteus oculatus (spotted gar): 102684324
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Entry
102684324 CDS
T07349
Name
(RefSeq) protein RRP5 homolog isoform X1
KO
K14792
rRNA biogenesis protein RRP5
Organism
loc
Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
loc03009
]
102684324
Ribosome biogenesis [BR:
loc03009
]
Eukaryotic type
90S particles
Other 90S particles
102684324
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1_RRP5
S1
Spt6_S1
OB_RRP5_4th
OB_RRP5
COG4_N
Motif
Other DBs
NCBI-GeneID:
102684324
NCBI-ProteinID:
XP_015203002
Ensembl:
ENSLOCG00000011818
LinkDB
All DBs
Position
LG5:31455380..31481628
Genome browser
AA seq
1526 aa
AA seq
DB search
MASVEEDFPRGGKVKRAEGSQPVRNHVEQDNLFEARDPEEGKKRKKKRTEEEKTSKKRMN
REEETLKLNASKNVEILHLRNVTVGTLLLGCVKEVNDFELVVSLPSGLTGFVQITNISDS
YTKLLSEQLDSAQSLEETLTLPRLFPPGMLLRCVVSSVEVTKGGHQSLKLSVNPREVNKA
LGAGSLKAGMLISGSVESIEDHGYLVDIGVSGAKAFLPRQKAKDLQLESKGGLMVGQYLN
CLLEEVKNEGRIVRLSVGPSEIAKAVADTQQGWTLNSLLPGLIVKAKVKKVTIHGPILEF
LSSFTGTVDFLHIDSEKASDYTPGDTVKACVLYIDPSTRTVGLSLRPHLLHPGSKLHTVS
NTQIGEVVQDCKVKSFHQHSGAILKLPDGSLVFAHKNHLKESHESFDPNRTLAGSTHTCR
ILDFSPLEQMLLVSLRKSVIEAPFLQYQDLQPGQLVTGIVTSLHDFGMLVKVTEHIRGMV
PRTHLADIILKNPEKKYRPGDEVKCRVLTVDPKVKNLVLTRKKTLVESTLPLICTYQDAK
PGQMSHCYIVSVKDFGCIVRFYGNVKGLVPVGELSMEPKVIPEKLFYVGQVVKAKVMKCD
PHQEKLLLSFKGVAEDIQTVPEESSFEYEVGKTVEARIVQKTDSGLKVSILPEEAAAFLP
TVHLSDHVSNCSLLWEGLREGDIISNVVCLSKSKEQIILSKKPSLKAVFEDGVVARNFAE
LNAGMLLAGWIKNVMSYGVFVEFPYGLVGLAPISAMSDKFVTNTGDAFKVGQTVVAKVTN
LDEEKRRFLVTLKVSEVSLEREEAAALLSQCIQERNTVAQMMANQGHSELLQSLSSLKVG
QKLKLTVDEVNDNGTATFKADHLNGVTILASKYHLTGVTVVEGQKVTGVILHVDFLTRQL
HISLSPLLVSSKCKLKANVTMPATLQYVERDFAVIRLGETGHLTFISTKTHWNDTFRFES
ERLSVGQCLTVTVKKPKSEELGGFPSVTWVSGKIVGSRRERSLSQSKDEKLGGPKHPFSL
GDTVKGTIKTIRPLSVLVALEGGITGSIHVSEVLEQVKPGTFPVSTLTKGSTVTARVIGG
REVRSHKFLPISHPNFTFTIPELTLLPSKMEGDLPTQEEHAEALENYQPGQEVTCFVYKY
NTVKKCLEVDVTPVLGGKVDLLLMSLTPKELKHPEKLCKLGQALKATVVSTSSCKTKLVL
SLTGLHSLTNGSITLGTVAKIVKRVGLVVSLPFGHTGRVSVLDLDDCYRPNPLDSYHVGQ
VVRCCIVESEENKLQLSLRRSRTTPGSSQVVKDPEIPSIADLKEGQRLRGYVTSIKDCGV
FISLSRSIIGRAQFHHVTKHFTADHSVFVKHIPLNSLLTTKVLSIDKEKGQVELSLLPED
TGGPDVLPESLGLPLRMKVEETTEDSQKKRKRQTSESEQEAIEKSKKKKKKKTSGKSEEN
DSGVEVYFREDEEENKKLPSKKKAQPAQTECVSPQRLHVSSGFSWDTGLSTLRPATVDPV
ADSSSEEEEENTEKKASHPQNSILPL
NT seq
4581 nt
NT seq
+upstream
nt +downstream
nt
atggcatcagtggaagaggattttcctcgggggggtaaagttaaaagggccgaggggagc
cagcccgtgaggaaccatgtggagcaagacaacttgtttgaggcccgtgacccagaagaa
ggaaagaaaagaaagaagaagagaactgaggaagagaagacatcaaaaaagcgaatgaac
agggaggaggaaactctgaaactcaatgcatcaaagaatgtggaaattctgcatttaagg
aatgtaactgtgggtactctgctactgggctgcgtgaaagaggttaatgattttgagctg
gtggtcagccttcccagtggcctgactggctttgtccagatcaccaacatctcggactca
tataccaaactgctcagtgaacagctggattcagcccagagcctggaggaaacgctgacc
cttccacgcctcttcccccctgggatgttgctcaggtgtgtggtgtcaagcgtggaggtc
actaaaggaggtcatcagagtctcaagctgtcagtcaatccaagagaggtcaataaggct
ctgggtgctggatctcttaaagcaggcatgcttatcagtggcagtgtggagagtattgag
gatcatggctacctggtggacattggtgttagtggagccaaagcttttctacccagacaa
aaggcaaaggatctacaattagaaagcaaaggaggccttatggtgggtcagtacttgaat
tgcctgttggaggaggtgaaaaacgagggccgaattgtccggctgtctgtcggtccgtct
gagattgctaaggccgtagctgacacccagcagggctggacactcaacagtctgctgcca
gggctcatagtcaaagccaaagttaaaaaggtgaccattcatggccccattctggagttc
ctttcctccttcactggcactgtggacttcctgcacattgattcagagaaagcctctgac
tacacccctggcgacactgttaaggcctgtgtgctgtacatcgacccctccacaaggaca
gtgggcctgagcctgcggccccacctgctgcacccaggcagcaagctgcataccgttagc
aacacgcagattggggaggtggtgcaggactgcaaggtgaaatccttccaccagcactcg
ggagccatcctgaagctgccagacggatctcttgtttttgcacacaaaaatcacctgaag
gaatcgcatgaatccttcgaccccaaccgcaccctggctgggtccactcacacctgccgg
atcctggacttcagccccctggagcagatgctcctggtcagcctgcgcaagagtgtgatt
gaagccccattcctccagtaccaggatctacagcctggacagcttgttacaggcatagtg
acttcactgcacgatttcggcatgctggtgaaagtgacagagcacatccggggcatggtt
ccacggacacacctggctgacattatcctgaagaacccagagaagaagtacaggcctggg
gatgaagtcaagtgtcgagttctcacagtagaccccaaagtgaaaaatcttgtgctaaca
aggaagaagaccctggtggagtccaccttgcctctgatctgtacctatcaagatgcaaag
cctgggcaaatgtctcactgctacattgttagtgtgaaggactttggctgtatcgttcgt
ttctatggcaacgtcaagggcctggttcctgttggtgagctcagcatggagcctaaagtt
atcccagaaaaacttttctacgttgggcaggttgtcaaagccaaggtcatgaagtgtgac
cctcatcaagagaagctgctgttgtccttcaagggagtagcagaagacattcaaacagtt
ccagaagagagttcctttgaatatgaagttggaaagactgtggaagcaaggattgtccag
aagactgacagcggtctcaaggtctcaattctccctgaagaagcagctgcattccttccc
acagtgcacctctctgaccatgtgtctaactgctcactgctctgggagggactaagagag
ggtgacatcatctctaatgttgtgtgcctcagcaagagcaaggaacagattatactgtcc
aaaaagccttctctgaaggctgtctttgaggatggagtcgtggccagaaactttgcagaa
ctgaatgctgggatgctgctggcagggtggatcaagaacgtcatgtcctatggagtgttt
gtcgagttcccgtatggattagttggactggctcccatatctgcgatgagtgacaagttc
gtcacaaacacgggggacgccttcaaggtagggcagactgtggtcgccaaggtaaccaac
ctggatgaagagaagcggcggttcctagtcaccctgaaggtgtcggaggtcagcttggag
cgtgaagaagcagcagctttgctgtcacagtgtattcaggaaaggaacactgtggcccaa
atgatggccaaccaaggccattctgaactactgcagagtctctccagcctgaaggttggg
cagaagctgaaactcacagtggatgaagtaaatgataatgggacagctacctttaaagca
gaccatcttaatggagtaaccatactggcctcaaagtatcacttaactggtgtcactgtt
gtcgaagggcagaaggtaaccggagtgatacttcatgtggatttcctcacccgccagctt
cacatctccctgtctcccctgctggtctccagtaagtgcaagcttaaagccaatgtaaca
atgcctgcaacactgcagtatgtggaacgggactttgccgttatcaggttgggcgagact
ggccatcttactttcatctctacaaagacccattggaatgatacgttccgctttgagtct
gagcggttgtctgtgggccagtgcctcactgttacggtgaaaaaacccaaatctgaggag
cttggggggttcccctccgtcacctgggtgtctgggaaaatagtgggctccagacgggag
cgcagcctctcacagagcaaagatgagaagctcggtggccccaagcaccccttcagcttg
ggcgacacggtgaaaggtaccatcaagaccatcaggccgctcagtgtcctagtggccttg
gaagggggaatcaccggcagcatccacgtctccgaggttctggagcaggtgaagccgggc
acgttccctgtgtctacattgacgaagggcagcaccgtcactgcccgtgtcatcggggga
agagaagtcaggagtcacaagtttttgccaatttctcatccaaactttactttcacgata
cctgaactgacacttctaccaagcaagatggaaggagacctgccaacccaggaggagcac
gctgaagcattggaaaactaccagcctggacaggaggtcacctgttttgtgtacaagtac
aacactgtgaagaagtgcctggaggttgacgtgaccccagtcctcggtgggaaagtggac
ctgctgctgatgagcttgaccccaaaagagctgaaacacccagagaagttgtgtaaactg
gggcaggcactgaaagctactgttgtcagcacaagctcttgtaaaacaaagctggttctc
tctctcacaggtctccacagcttaaccaacggatccatcactctaggcactgttgccaaa
atcgtgaaacgcgtcggccttgttgtgtccctgcctttcgggcacactggccgtgtgtca
gttttagacctcgatgattgttacaggcccaaccctctggacagttatcatgtgggtcag
gttgtcaggtgctgcattgttgaaagtgaagagaacaagctacagctgtctctccggagg
tccaggacaacccctggaagtagtcaggtagtgaaggacccagaaatcccctccattgct
gacctgaaggaaggccagcggttacgtggctatgtgacgtctattaaagactgtggtgtc
ttcattagcctttcgaggtccatcattggtcgagctcagtttcaccatgtcacaaagcac
ttcacggctgaccatagtgtatttgtgaaacacattcccctgaactctctgcttactacc
aaggtcttgagcatagacaaagaaaagggtcaagtggaactgtctttactcccagaggac
actggggggcctgatgtcctcccagaatccctgggtttgccactgcggatgaaggtggaa
gagacgacagaagattctcagaagaagcgaaagaggcagacttccgagagtgagcaggag
gcaattgagaaatccaagaagaaaaagaagaagaagacgtcaggaaaatcggaggagaac
gacagtggagtggaggtctatttccgagaggacgaggaggagaataaaaagctaccctct
aagaagaaggcccagcctgctcagactgaatgcgtgagcccccagcgactccatgtctcc
agtggattctcgtgggacacgggcctcagtaccctacggccagccactgtggatccagta
gcagattcttccagtgaggaagaggaggaaaacacggagaaaaaggcaagtcacccccag
aattccattttgccattgtga
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