Lepisosteus oculatus (spotted gar): 102684349
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Entry
102684349 CDS
T07349
Symbol
fn1
Name
(RefSeq) fibronectin isoform X1
KO
K05717
fibronectin 1
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc04510
Focal adhesion
loc04512
ECM-receptor interaction
loc04810
Regulation of actin cytoskeleton
loc04820
Cytoskeleton in muscle cells
loc05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102684349 (fn1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102684349 (fn1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
102684349 (fn1)
04810 Regulation of actin cytoskeleton
102684349 (fn1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
102684349 (fn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
loc04131
]
102684349 (fn1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
loc04147
]
102684349 (fn1)
00536 Glycosaminoglycan binding proteins [BR:
loc00536
]
102684349 (fn1)
04990 Domain-containing proteins not elsewhere classified [BR:
loc04990
]
102684349 (fn1)
Membrane trafficking [BR:
loc04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
102684349 (fn1)
Exosome [BR:
loc04147
]
Exosomal proteins
Exosomal proteins of bladder cancer cells
102684349 (fn1)
Glycosaminoglycan binding proteins [BR:
loc00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102684349 (fn1)
Domain-containing proteins not elsewhere classified [BR:
loc04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type I domain-containing proteins
102684349 (fn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
fn1
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
fn2
Fn3_Dep-1_2nd
NDNF
FN3_Tor_3rd
Fn3_Dep-1_4th
Motif
Other DBs
NCBI-GeneID:
102684349
NCBI-ProteinID:
XP_015214673
Ensembl:
ENSLOCG00000010020
LinkDB
All DBs
Position
LG12:complement(25243632..25301166)
Genome browser
AA seq
2418 aa
AA seq
DB search
MTCSPMIGLIVALCFSSVVHCMPKHATKSKRQAQQVIPFDEASLSQDGCLEGERFFRINE
QWERPYLGSTLVCTCHGSRGIKCKTKPEAEETCYDKINGRTYRVGETYERPKDGMIWDCT
CIGSGRGKISCTIANRCHEGGQSYKIGDTWRRPHETGGYMLECVCLGNGKGEWTCKPVAE
GCYDNTAGTSYVVGEIWEKPYQGWMMVDCTCLGEGNGHITCTSRNRCNDQDTRTSYRIGD
TWTKTDARGHILQCICTGNGRGEWKCERHASLHTSSLGTGSQVVTSVQTTVHQPLPQPEP
PTEGTCLTDSGVSYFEGMQWIKTQGSKQMLCTCLGNGVSCVEWDGQSQVYGGNSDGQPCV
FPFVFMGKSYYSCTSEGRSDGQLWCSTSSNYEQDRMYSFCTQKNVLVTTRGGNSNGALCH
FPFLYNGRNYTDCTADGRRDGMKWCGTTSNYDGDQKFGFCPMAAHEEVCTTSEGVMYRVG
DQWDKRHDVLGHMMRCTCVGNGRGEWSCIAYSQLRDQCIVDGLTYEVNQTFTKRHDEGYM
MNCTCYGQGRGRWKCDAIDQCQEPETRVFYQVGESWDKVIHGIQYKCYCYGNGIGELSCL
PSQPHSGTSVISIAEAGNPNTRPLQWNSPQSAHIVQYILKWRPKNGRVLWKEVVIPGHLT
SYTIEGLKPGITYEGQLISILRYGRREVTRFDFTTTYGSLSTSEGETTPPPPVVDTSESV
TEITSSSFVVSWVSASDTVSGFRVEYELSEEGAQPKILDLPHTATSVNINDLLPGRKYIV
NVFEVTGEGEPNLILSTTQTTAPDAPSEHLIDDVGETSIVIRWSKPLAPITGYRVVYTPS
IEGSSTELTLPETATSVTLSDLRPGLLYNISIYAVEENLESEPVFIQVNTAGDPLPAQVP
SPTKLQFMEVTDVKITLTWTPPSSEVSGYRVTVTPVGLPGSDNEGRQLPMTRNTYAEIAS
LQPGTTYRFHIYAVHGGVQSEPLVGEQSTKIDAPTNLQFTNVTEDGAVVVWSAPMSKISG
YRLLLSISGERPEQKKIPPRLTQYSLINLRPNTKYTVTLYAEKDGVLSEAITRLLTTLES
MGSAPRFSTDVTDTSIIIAWTPAPRIGYKLTVRPSQGGEAPREVTSGSGSIVISGLTPGV
EYTYSIQPLVDEQEHGTPITKKVITPLSPPTDLKLDSNPHTGELIVSWEGTKTADITGYR
VTCTPNGGQRGNSLEEFVRAGQNSCTLDNLSPGVEYNVSVYTVKDNMESEPVSKIVTQDV
PKLTDLSFVDVTDTTIGLRWTPHNYTAITGYRITVVAAGESVPIFEDFVEPTTGYYTVMG
LEPGIDYDISVITLTEGGESQPTTLTQQTAVPTPTNLQFFDIGPDSMKVTWTAPTSVKIS
RFMVRYSPVKNEYDINERNVPGTSNNIVLRGLLPHTEYLVSVVCVYEEQESTPVTGTQKT
ALDSPTGIDFSEVYPNSFTVHWLAPRAVITGYRIRYQMASGGRSKDERLPPSRNHFTLTG
LVPQTEYIIHIFAISGTDESLPLTGRQSTISDAPTDLKVDSSSPTSITISWEAPPVTVRY
YRITYGETGGRSPVKDFTVPGSQSTATIGNLQPGTDYTVTVYAVTGRGDSPASSTPIAVT
HKTEIESPSGMEVRDVKDNAITVRWTPSSGSVTGYRVTGIPKNGMGPSFSEVVSPDQTEM
TFSGLMPTVEYVLSVYAQGQNGESAPLIESAVTGVDRPKALTFTDIDTTSIKIAWESPEG
QVTSYRVTYSSPEDGERELRPAPHGEDDTAELHGLRPGTEYTIKIIALHNDLESQPLVGT
QATAIPAPTDLKFSQVAPSSLTISWQAPKARLTGYRVVVNPKDKTGPTKEINLAPDTTSV
FVSGLMVATKYEVNVYALKSSLTSRPARGEVITLDNISPPRRVRISDLSDSSITLTWRSK
TETISGFYIEATPAGSQTPIQNSVRPDARTYTITGLQPGTMYTIHIYAMNGEARSAPFTL
TATTNKPAVESPSNIRFISITPSSISFTWEPPRARVTGYFITYEEAGGSRKEITPQPHAG
ISQATISGLRPGTEYIIKIIALQNALRSAPLVGIARTQHEPQLPNPQRPVPDILDVPEVI
PIRFDDDNGIQLVGTNGHGLGQQGQHVYIENQSLGNSGHHDQDNETDTTQEAQSQTTISW
NPLQQTSEYLISCHPLAPNEQVFQFRVPGTSTSATLNGLTSGASYNVIVEALKGGLKHKV
LEEIITVGNAEGVPTKDMCYDTFTATYHEVGAEWERMSETGFKLWCTCLGFGSGHFRCDS
SKWCHDNGNNYRIGEKWNRQTENGHMMSCTCLGNGKGEFKCEPHEATCYDEGKMYQVGQQ
WQKEYLGAICTCTCFGGQQGWRCENCRRPSAEVDVSLPSTQTHFSDRYRDNTLRKVHIKC
PIECTRPELLADAHVPGK
NT seq
7257 nt
NT seq
+upstream
nt +downstream
nt
atgacttgtagccctatgataggcttaatagttgcgttatgtttcagcagtgttgtccat
tgtatgcccaaacatgcaactaaaagcaaaaggcaggctcagcaagtaatccctttcgac
gaagcatcgctttctcaggacggctgccttgagggcgaacgattttttagaattaacgaa
caatgggagcgtccgtacctgggcagtacattggtttgcacttgtcatggaagtagagga
attaaatgcaaaactaaaccagaagctgaagaaacttgctatgataaaatcaatggacgg
acctatcgcgtgggagaaacatatgagcgtccaaaggatggcatgatctgggactgtact
tgcattggttctggcagaggaaagattagctgcacaattgctaaccggtgtcatgaggga
ggacaatcttacaagattggagatacctggaggaggccacatgagacagggggctacatg
ctggagtgtgtttgtctgggaaatggaaagggagaatggacctgcaaacctgttgctgag
ggatgctatgacaacactgctggcacatcttatgtggttggtgagatatgggagaaaccc
taccaaggctggatgatggtagactgcacctgtttgggagaaggaaatggacatatcacc
tgcacttctagaaacagatgcaatgaccaggatactaggacttcttacagaattggagac
acctggaccaagacagacgctagaggccacattcttcaatgcatctgtacaggaaatggt
cgaggggaatggaaatgtgaaagacatgcttctctgcacacttcaagccttggcacgggt
tctcaagtggttactagtgttcagaccactgtacatcagcccctgccccagccagagcct
ccgacagagggaacctgtctgactgattcaggtgtttcttatttcgaggggatgcaatgg
ataaagacacaaggaagcaaacaaatgctttgtacatgcttgggtaatggagtgagctgt
gtggaatgggatggtcagtcacaggtttatggtggcaactcagatgggcagccttgtgtt
ttcccatttgtatttatgggtaagtcctactactcctgtacttctgagggacgcagtgat
ggacagctgtggtgcagcacctcctccaattatgaacaggaccgtatgtactccttctgc
acacagaagaatgtgttggtaacaacaagaggtggcaactccaatggagctttgtgtcac
ttccctttcttgtacaatgggcgcaattacacagactgcactgcggacggaagaagggat
gggatgaaatggtgtggcaccaccagcaattatgatggtgaccagaagtttgggttctgc
ccaatggcagctcatgaggaggtgtgtaccactagtgagggagttatgtaccgtgttggt
gaccaatgggacaagcgacatgatgtcctaggacacatgatgaggtgtacatgtgttgga
aatggacgtggtgaatggagctgcattgcgtattcacagctgagagatcagtgcattgtt
gatggcctgacatatgaggtgaaccagacctttactaaacgtcacgatgaaggctatatg
atgaactgtacatgttatggacaaggccgtggcagatggaaatgtgatgctattgaccag
tgccaagaaccagagactcgagtgttttaccaagttggcgaatcctgggataaggttatc
catggcatccaatataagtgttactgctatgggaatggaattggagagcttagctgccta
ccttctcagcctcacagtggcacctctgtgatttccattgctgaagctggtaatcccaat
acacgtcctctccagtggaactcgccgcagtctgctcacatcgtccagtacatccttaag
tggagaccgaaaaatggacgtgttctctggaaggaggtggttattcctggacacctcacc
tcctacaccattgaaggcctaaagcctggcatcacttacgagggtcagctgatcagtatc
ctgcgttatggacggagagaggtcacacgatttgacttcaccacaacatatggatccttg
tccacatcggagggtgagacgacacctcccccccctgtggtagatacttcagagtctgtg
actgagatcacttcaagcagttttgtggtgtcctgggtgtctgcttcagacactgtgtca
ggtttcagggtggaatatgagctcagtgaagaaggggctcagccgaaaatccttgacctg
cctcatactgctacttctgtcaacattaatgacctgctgcctggtcgtaagtacattgtg
aatgtgtttgaagtcacaggggaaggggaacccaatctcattctttctaccacccagaca
acggctcctgatgcaccatctgaacaccttatcgatgatgtgggagaaacctctattgtc
atcagatggtccaagcccctggctcctatcacaggatatcgtgtggtctacaccccttca
atcgaagggagcagtactgagcttacactacctgaaacagccacctcagtaaccttgagt
gacctgcgtcctggtctgctctataacatcagcatctatgcagttgaagagaacctagag
agtgagccggtctttattcaggttaacactgcgggggatccattgccagcacaagtccca
tcacccacaaagttgcagtttatggaagttactgatgtgaagatcacccttacatggaca
cctccttcaagcgaagtgtctgggtatcgtgtaacagtcacaccagttggtcttccaggc
agtgacaatgaggggcgtcagttgccaatgactaggaacacctatgctgaaatagcttca
ctccaaccaggcaccacctaccgctttcacatctatgctgtccatggaggtgtgcagagt
gagccattagtgggagaacagagcaccaaaattgatgctcctactaatcttcagttcaca
aatgtgacagaggacggtgctgttgttgtttggagtgcaccaatgtccaaaatttcaggg
taccgtctgttgttgagcattagtggggagcgccctgaacagaagaagataccaccaagg
ctgactcagtattctctcataaaccttcgacccaacaccaaatatacggttactctttat
gcagagaaggacggcgtgctaagtgaggctatcaccagattgcttactactttggagtct
atgggaagtgctccacgtttcagcacagatgtaacagatacttcaattatcatcgcttgg
acccctgcaccgagaattggatacaagttgacagttaggccaagccagggtggtgaagct
cccagagaggtgacctctggctcgggcagcatcgtcatctctggattgactcctggagta
gaatatacctacagtatccagcccctggttgatgagcaggagcatggtacccccatcacc
aaaaaagtcatcacgccactctctccacctactgacctgaaactggattcaaatcctcac
actggagagctcatagtttcgtgggagggtaccaaaacagctgatatcactggatacaga
gttacctgcactccaaatgggggtcagcgaggcaactccctggaagaatttgtcagggcc
gggcagaactcctgcacattggacaacctgagtccaggtgttgaatacaatgtcagtgtg
tacactgtcaaagacaacatggagagtgaaccagtctccaagattgtcactcaagatgtc
cctaagcttactgacctcagttttgtcgatgtcaccgatacgactatcggactgaggtgg
accccgcataactatactgctataactggctaccgcattacggtggttgccgctggagaa
agcgtccctatttttgaagactttgtggagcccacaacaggatattacactgtaatgggc
ctggaacctggaattgactatgacatcagcgtgatcactctcactgagggcggcgagagt
cagcccacaaccttgacacagcaaactgctgttccaacaccaaccaaccttcagttcttt
gacattggtccggatagcatgaaagtgacctggactgcacccacatctgttaaaatttcc
aggttcatggtgcgttactctcctgtgaagaatgagtatgacatcaatgaacgtaatgtt
cctggcacaagcaacaatattgtgctccgaggtcttctgcctcatacagaatatttggtc
agtgtggtctgtgtttatgaagaacaagagagtacgccggtcactgggactcagaaaaca
gccctagactctcccactggcattgacttctcagaggtttacccaaattccttcactgtg
cactggttggcaccccgtgcagtcattaccggttacaggatccggtaccagatggcaagt
ggtgggcgttccaaggatgaaagactgcccccttcacgcaatcatttcacccttactggc
ctggtcccacagactgagtacatcatccacatctttgcaatcagtggtacggatgagagc
ctgcctttgactggccgtcaatcaacaatttctgatgctccaactgatttgaaagtggat
tcttcctctcccacaagtataaccatcagctgggaggctcctcctgtcactgtgaggtac
tacagaatcacgtatggagagacgggaggtcgcagccctgttaaagatttcactgtccct
gggtcccagtcaactgccaccattggaaacctgcagcctggcaccgattatactgtgact
gtgtatgctgtcactgggcgaggtgacagcccagcttccagcactccaatcgcggtcact
cacaaaacagagattgagtctccttctggaatggaagtgagagatgtaaaagacaatgcc
attacagtgaggtggaccccttcatctggatcagttactgggtacagagttacaggcatt
cccaaaaatggcatggggccttcattctctgaggttgtttctcctgaccaaacagaaatg
accttttcgggtctgatgccaacagtggagtatgtgcttagtgtgtatgcccaagggcag
aatggagagagtgcccctcttatagaaagcgctgtaacaggtgttgaccgtcccaaagcc
cttacttttacggacattgacacaacctccatcaaaatagcctgggagagccctgagggc
caggtgacttcatacagagtgacatattccagcccagaagatggggaacgtgagctgagg
ccagccccccatggggaggatgatactgcagagctgcatgggctgaggccaggcactgaa
tacactattaaaatcattgctctgcacaatgacttggaaagtcagcctcttgttggaact
caggctacggcaatacctgctcccactgatttaaagttctcgcaagttgccccatccagc
ctgacgatatcatggcaagcacctaaagccagactcactggttaccgtgtggtggtcaat
cccaaggataagactggaccaaccaaagagatcaacctggcacctgatacaacctctgtt
tttgtctcaggattaatggttgctactaaatatgaagtaaatgtctatgccctgaagagc
tctctgacaagccgacctgctcgtggagaagttatcacgctggacaatataagtccacct
cggcgtgttaggatctcagatttgtcagattcctccatcactctcacttggcgttctaaa
acagaaaccattagtggtttctatattgaagctactccagctggaagccagacccctatt
cagaactctgtccgcccagatgccaggacctacaccattacaggcctccagccaggcact
atgtacaccattcacatttatgccatgaacggtgaagctcgcagtgctccattcactttg
actgccaccacaaataagccagcagttgagtctccatcaaatatcaggttcatttccatc
actccaagctccatttccttcacttgggagcccccacgtgccagggtgactggctacttc
atcacctatgaagaggctggtggaagccgcaaggaaatcactccacagccccatgctggc
atcagtcaagctacaatatctggtctgagaccaggcacagagtacatcatcaagatcatt
gctttacagaatgctttgagaagtgctccacttgttgggattgcccgaacacaacatgaa
cctcagctgccaaatccccagcgaccagtgcctgatatcctggatgttccagaggtgatt
cccatcaggtttgatgacgacaatggcatccagcttgtgggtaccaatgggcatgggcta
ggacagcagggccagcacgtatacattgagaaccagagtctgggaaactctgggcatcat
gatcaagacaatgagacggataccacccaggaggcccagtcacagactactatttcttgg
aatcctctgcagcaaacctctgaatacctaatttcttgccaccctttggcccccaatgag
caggtgttccagtttcgtgtgccaggaacttccactagtgcaacccttaatggcctcaca
tctggagcttcatataacgtcattgttgaggccctgaaaggagggctgaagcataaggtt
ttggaggaaatcattacagtaggaaatgctgaaggggttcccacaaaagatatgtgctat
gatactttcaccgcaacataccatgaagttggagctgagtgggagcgcatgtcagaaact
ggttttaagctgtggtgtacttgcttaggctttggcagtggccatttcaggtgtgactca
tccaagtggtgccatgacaatgggaacaactatcgaattggtgagaaatggaaccgccag
acagagaacggtcatatgatgagctgtacatgcttgggtaatggcaaaggagagttcaag
tgtgagcctcatgaagccacctgctatgatgaaggtaaaatgtaccaggttggacagcag
tggcagaaggaatatcttggagctatctgcacctgcacatgctttggtggacagcaggga
tggcgttgtgaaaactgtcgcaggccctctgctgaagtagatgtctccctaccatccaca
cagacgcacttttctgacagatacagggacaacactctgaggaaagttcacatcaagtgt
cccattgagtgcacaaggccagagctgcttgcggatgcacatgttcctggaaaataa
DBGET
integrated database retrieval system
