KEGG   Lepisosteus oculatus (spotted gar): 102684366
Entry
102684366         CDS       T07349                                 
Symbol
elavl1
Name
(RefSeq) ELAV-like protein 1 isoform X1
  KO
K13088  ELAV-like protein 1
Organism
loc  Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:loc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:loc03019]
    102684366 (elavl1)
   03041 Spliceosome [BR:loc03041]
    102684366 (elavl1)
Messenger RNA biogenesis [BR:loc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     102684366 (elavl1)
   mRNA cycle factors
    Stress granule specific factors
     102684366 (elavl1)
Spliceosome [BR:loc03041]
 Common components
  Common spliceosomal components
   General mRNP proteins
    102684366 (elavl1)
SSDB
Motif
Pfam: RRM_1 RRM_5 RRM_10 BRAP2 RRM_3 RRM_2 YqeY
Other DBs
NCBI-GeneID: 102684366
NCBI-ProteinID: XP_006639835
Ensembl: ENSLOCG00000000284
UniProt: W5LW06
LinkDB
Position
LG19:1229047..1240163
AA seq 340 aa
MAVRRGHIRYLKEVYDMSNGYEDHMADESKDAKTNLIVNYLPQNMTQDELRSLFSSIGEV
ESAKLIRDKVAGHSLGYGFVNYVNPSDAERAINTLNGLRLQSKTIKVSYARPSSDTIKDA
NLYISGLPKSMTQKDVEDMFTRYGRIINSRVLVDQASGLSRGVAFIRFDKRAEAEDAIKD
LNGQKPPGATEPITVKFAANPNQAKNSALLSQLYHSQSRRFGGPVHHQAQRFRFSPMSVD
HMSGLSGVNVPGNSTSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKG
FGFVTMTNYEEAAMAIASLNGYRLGDKILQVSFKTSKSHK
NT seq 1023 nt   +upstreamnt  +downstreamnt
atggcagtcagaaggggccacattagatacttaaaagaagtttatgacatgtcaaatggt
tacgaagaccacatggcagatgaatcaaaggatgccaaaacaaacttgatcgtcaattac
cttccccagaacatgacccaggatgagctgcgtagccttttcagcagcatcggggaggtc
gagtccgccaagctcatccgcgacaaagtggcaggccacagtttagggtacggatttgtt
aactatgttaaccctagtgatgcagaaagggcaatcaatacactcaatgggctgagacta
cagtctaaaactatcaaggtttcctatgcccggccaagttctgacaccattaaggatgcg
aatctgtacataagtggtctgcccaagtccatgacacagaaagatgtggaggacatgttc
acacgatacggccgcatcattaactcgcgtgtcctcgtcgatcaggcttcaggtttgtcc
cgcggcgttgccttcatccgctttgataaaagagccgaggcggaagacgccatcaaagac
ctgaacggtcagaagccccccggcgccacggagcccatcacggtgaaattcgcagcgaac
cccaatcaggccaagaactcggctctgctctcccagctgtaccactcgcagtcacggcgc
ttcggcgggccggtccaccaccaggcacagaggttcaggttttcccccatgagtgtagat
cacatgagtggtctgtctggtgtcaatgttcctgggaactccacgtctggctggtgtatc
ttcatctacaatcttgggcaggatgcagatgaaggaatcctctggcagatgtttgggccc
tttggagcagtcactaacgtgaaagtgatccgtgattttaacaccaataaatgtaaaggg
tttggtttcgtgaccatgacaaactatgaagaggctgctatggccatcgccagcctcaat
ggttatcgccttggggacaaaatcctgcaggtctcattcaaaaccagcaagtctcacaag
taa

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