Lepisosteus oculatus (spotted gar): 102684366
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Entry
102684366 CDS
T07349
Symbol
elavl1
Name
(RefSeq) ELAV-like protein 1 isoform X1
KO
K13088
ELAV-like protein 1
Organism
loc
Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
loc03019
]
102684366 (elavl1)
03041 Spliceosome [BR:
loc03041
]
102684366 (elavl1)
Messenger RNA biogenesis [BR:
loc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
102684366 (elavl1)
mRNA cycle factors
Stress granule specific factors
102684366 (elavl1)
Spliceosome [BR:
loc03041
]
Common components
Common spliceosomal components
General mRNP proteins
102684366 (elavl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_10
BRAP2
RRM_3
RRM_2
YqeY
Motif
Other DBs
NCBI-GeneID:
102684366
NCBI-ProteinID:
XP_006639835
Ensembl:
ENSLOCG00000000284
UniProt:
W5LW06
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Position
LG19:1229047..1240163
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AA seq
340 aa
AA seq
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MAVRRGHIRYLKEVYDMSNGYEDHMADESKDAKTNLIVNYLPQNMTQDELRSLFSSIGEV
ESAKLIRDKVAGHSLGYGFVNYVNPSDAERAINTLNGLRLQSKTIKVSYARPSSDTIKDA
NLYISGLPKSMTQKDVEDMFTRYGRIINSRVLVDQASGLSRGVAFIRFDKRAEAEDAIKD
LNGQKPPGATEPITVKFAANPNQAKNSALLSQLYHSQSRRFGGPVHHQAQRFRFSPMSVD
HMSGLSGVNVPGNSTSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKG
FGFVTMTNYEEAAMAIASLNGYRLGDKILQVSFKTSKSHK
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggcagtcagaaggggccacattagatacttaaaagaagtttatgacatgtcaaatggt
tacgaagaccacatggcagatgaatcaaaggatgccaaaacaaacttgatcgtcaattac
cttccccagaacatgacccaggatgagctgcgtagccttttcagcagcatcggggaggtc
gagtccgccaagctcatccgcgacaaagtggcaggccacagtttagggtacggatttgtt
aactatgttaaccctagtgatgcagaaagggcaatcaatacactcaatgggctgagacta
cagtctaaaactatcaaggtttcctatgcccggccaagttctgacaccattaaggatgcg
aatctgtacataagtggtctgcccaagtccatgacacagaaagatgtggaggacatgttc
acacgatacggccgcatcattaactcgcgtgtcctcgtcgatcaggcttcaggtttgtcc
cgcggcgttgccttcatccgctttgataaaagagccgaggcggaagacgccatcaaagac
ctgaacggtcagaagccccccggcgccacggagcccatcacggtgaaattcgcagcgaac
cccaatcaggccaagaactcggctctgctctcccagctgtaccactcgcagtcacggcgc
ttcggcgggccggtccaccaccaggcacagaggttcaggttttcccccatgagtgtagat
cacatgagtggtctgtctggtgtcaatgttcctgggaactccacgtctggctggtgtatc
ttcatctacaatcttgggcaggatgcagatgaaggaatcctctggcagatgtttgggccc
tttggagcagtcactaacgtgaaagtgatccgtgattttaacaccaataaatgtaaaggg
tttggtttcgtgaccatgacaaactatgaagaggctgctatggccatcgccagcctcaat
ggttatcgccttggggacaaaatcctgcaggtctcattcaaaaccagcaagtctcacaag
taa
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