Lepisosteus oculatus (spotted gar): 102684494
Help
Entry
102684494 CDS
T07349
Symbol
arhgef12
Name
(RefSeq) rho guanine nucleotide exchange factor 12
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc04270
Vascular smooth muscle contraction
loc04625
C-type lectin receptor signaling pathway
loc04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
102684494 (arhgef12)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
102684494 (arhgef12)
09153 Circulatory system
04270 Vascular smooth muscle contraction
102684494 (arhgef12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
loc04131
]
102684494 (arhgef12)
Membrane trafficking [BR:
loc04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
102684494 (arhgef12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PH_13
PDZ_2
SOS1_NGEF_PH
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
102684494
NCBI-ProteinID:
XP_015192849
Ensembl:
ENSLOCG00000002060
LinkDB
All DBs
Position
LG26:complement(1519191..1601223)
Genome browser
AA seq
1435 aa
AA seq
DB search
MSGTQSTITDRFPTKKPTRQCSIHSKDPPPDKKHKIEKSSVSSHEFDPTDLVSRTSRSRV
DGGKPELCGLVQRCVIIQRDDNGFGLTVSGDNPVFVQLVKEDGAAMRAGVQTGDRIIKVN
GTLVTHSNHVEVVKLIKSGSYVALTVLGRPPGLPQIPLTEVEGDAGPLGHGGSSVTSPHS
PGQTAGEHTSSPSDRITAPVPVWEENNIVHNQKVDILQKMLSKEQQDLQAMKEEYSRNPT
PKLLKEIQEAKKHIPQLQVQLNKATGGVQDGPLPSRLPSDALQISEGEDGAADADQGLSP
RGDGAVDSPRPNSTAPSISSGLHSALTDSQCQRDTPCHSPKTAPREGLNSFESPEAEDTP
DPDSHSQSSIGSPSSRLASQIIGAEDDYFETEDQINGQCSCFQSMELLKSRPAHLAAFLH
HVVSQFDPAPLLCYLYADLYKQTNSKETRRIFMDFHTFFMDRGANLKVAVPESISTELER
RRPELIPEDLHRQYVQVMQDTLLPDIQKNLEDFRQKRSMGLTVAENDLTKLDTERMRDRV
ALEKERTCAEHIISKIEDVLLTSQPTEEEKCTTMQYVILSYMKHLGVKVKEPRILEQKRV
RIGAFLPKIKVGRAMELHGKRLQKQMSQPAPSVPEHPEAGRTRGSQSSEGSDPTHTPSLA
TSPPHSASGGLSAEPGGRDFDSGAAPFSAAPKHGEGQHPGDSVDGLPRTPNTVFDFNIPG
FEQLPEEEREVDRTLEVGTPKAIRRMDTLSGGEVQSEDDQCYEIDAELDPPNWQQLVSRE
VLAGLTPHEIKRQEVINELFYTERAHLRMLRVLDRVFYQKLSQEAILSLGEIKQIFANLE
EILQLHVSISEQMVTIRKKNETSVIDQIGDDLLSWFSGGEEEKIKRAVGTFCSNQPFALE
LIKTKKKDSRFTAFMQEAESNRLCRRLQLKDIIPVEMQRLTKYPLLLENIAKNTEDAEER
EKVKRAGECCRQILNYVNQAVKESENKQRLEDYQRRLDLSSLKQSEYPMISEFKNLDLTK
RKMIHEGPLSWKVNKDKTIELYTLLLEDILVLLQKQDERLILKCHSKNLAGTADTKHIFS
PIIKLNTVLVRSVATDNKSFFVLSMSDNGAQIYELMAQTVSEQKTWQYLITQRADSMKTK
PHNVIPLPQPDSERDDADLISTTAHHKLSKDSDHISTASVQSPEKDVGVASPGMLQTPPS
DSAPFEGLKSDEEEEEEAGQEEEEGPYLDPELDDRLPFLPQRSRQGVAVDDEELAAFHFP
PSPARAEEALKSCEWKPLLCAELLETHTMYVYTNILLIAAGVVPFLAVLCCQTRPGAVAE
PSLGMVSACTAHRYLVLEGDEGAGESSTDDGLLGGPGELGERRGSAGDAGIDLRKLLSPS
SLPASAPDFGRQVMTHIRVLQASLHHLKEVETKYNLLCQRLAGSASDTDEHKDKS
NT seq
4308 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcacacagtctacaatcactgacaggtttcccaccaaaaaaccaaccaggcaa
tgtagcatccacagcaaggacccccctccagacaagaagcacaagattgagaaatcctcc
gtctcctcgcatgagtttgaccctacagacctggtgtcccggacgagccggagccgtgtg
gacggggggaagccggagctgtgtgggctggtccagagatgtgtgatcattcagagagac
gataatggcttcgggctgaccgtgagcggagacaatcctgtgtttgtgcagcttgtcaaa
gaagatggagctgcgatgcgtgctggcgttcagacaggagacagaatcattaaggtgaat
gggaccctggtcacgcattcgaaccatgtggaagttgtgaagttgatcaaatcgggctcc
tatgtggccctcacagtcctggggcgacctcccgggttaccccagatcccccttacggag
gtggagggggacgccgggcccctgggccatggggggtcctcggtcacctccccccactcc
cccggacagacggcgggggagcacacctccagcccctcggatcgcatcacggcccccgtg
cctgtctgggaagaaaacaacattgtgcacaaccagaaggtggatatattacagaagatg
ctctccaaggaacagcaggatttacaggcgatgaaggaagagtacagccgaaaccccaca
cctaaactactgaaggagatccaggaagccaagaagcacattcctcaactgcaggtgcag
ctcaacaaggcgacaggcggagtgcaggacgggccgctcccctccaggctgccctcggac
gccctgcagatcagcgaaggggaggacggggcagcggacgcggaccagggcctctccccg
cggggcgacggcgcagtggacagcccccggcccaacagcacggcccccagcatctcgtcc
ggcctgcactccgccctcacggacagccagtgccaaagagacacgccctgccacagccca
aagaccgcgcccagggaggggctcaactccttcgagtcgccggaggccgaggacacgccc
gacccggactcccactcccagtccagcatcggcagcccctcgtctcgcctggcctctcag
attatcggagccgaggacgactactttgaaacggaggatcagatcaatggccagtgcagc
tgcttccagagcatggagctgctcaagtcccggccggcgcacctggccgccttcctccac
cacgtcgtctcgcagttcgaccccgcgccgctgctgtgctacctctacgctgacctctac
aagcagaccaactccaaagagacccgtcgcatcttcatggacttccacaccttcttcatg
gacagaggggcgaatctgaaggtagctgtgcccgagtccatctccacagaactcgagcgg
cggcggccggagttgatcccagaggacctgcacaggcagtatgtccaggtgatgcaggac
acgctactgccggacattcagaagaacctggaagacttcagacagaagcgcagcatgggg
ctaacggtggctgagaacgacctgaccaagctggacaccgagcgcatgagggaccgcgtc
gcgctggagaaggagcggacctgcgccgagcacatcatctccaagatcgaggatgtcctg
ctaacatcgcagcctacagaagaggagaagtgcaccaccatgcagtacgtcatcctcagc
tacatgaagcatctgggggtgaaggtgaaggagccccgcatcctggagcagaagcgggtc
cgcatcggcgccttcctccctaaaatcaaggtaggccgcgccatggagctccacggcaag
cggctgcagaagcagatgtcccagccggcccccagcgtccccgagcacccggaggccggc
cgcacccggggcagccagtccagcgagggctcggaccccacgcacacgccgtctctcgcc
acctcgcctccccacagcgccagcgggggcctgagcgccgagccgggggggcgcgacttc
gactctggtgcggccccgttctcggcagcccccaaacacggcgaggggcagcacccgggc
gactctgtggatggcctgccccggacccccaacacggtcttcgacttcaacatccccggc
ttcgagcagctgccggaagaggagcgggaggtggacagaaccctggaggttggcaccccc
aaggccatcagaaggatggacacgctaagcggcggcgaggtgcagagtgaggatgaccag
tgctacgaaatcgacgctgagctggacccaccgaactggcagcagctggtgagccgggag
gttctggccggcctgacgccccacgagatcaagaggcaggaagtcattaatgagctgttc
tacacggagcgcgctcacctgcgcatgctgcgtgtgctggaccgcgtcttctaccagaag
ctctctcaggaggccatcctgtccctcggagaaatcaagcaaatcttcgccaacctggag
gagatccttcagctgcacgtttcaataagcgaacaaatggtgacaatccgcaagaaaaac
gagacgtctgtgattgaccagattggagatgaccttctgtcctggttcagcggcggggag
gaggagaagatcaagcgggcggtcgggactttctgcagcaaccagcccttcgctctggag
ctgatcaagacgaagaagaaggactctcggttcacggccttcatgcaggaggcggagagc
aaccggctgtgtcgcaggctgcagctgaaggacatcattcctgtggagatgcagaggctg
accaagtaccccctgctgctggagaacatcgccaagaacacagaggacgcggaggagagg
gagaaggtgaagagggctggcgagtgctgccgacagatcctcaactacgtcaaccaggcc
gtcaaggagtcggagaacaagcagagactggaggactaccagcggagactggacctctct
tccctgaagcagagcgagtaccccatgatctcggagttcaagaatcttgacctgaccaag
cggaagatgatccatgagggacctctgtcctggaaggtcaacaaggacaagacaatcgag
ctgtacacgctcctcctggaggacatcctcgtgctcctgcagaagcaggacgagcggctc
atcctcaagtgccacagcaagaacctggccggcaccgcggacaccaagcacatcttcagc
cccatcatcaagctcaacaccgtcctggtgcgctcggtggccacagataacaagtcattc
tttgtgctctccatgtcggacaacggggctcagatctacgagctgatggctcagacggtg
tcagagcagaaaacgtggcagtacctgatcacgcagagggccgactccatgaaaacaaag
ccacacaatgtcatacccttacctcagcctgacagcgagcgagatgacgctgacctgatc
agcaccactgcgcaccacaaactgagcaaagactcggaccacatatccacggccagcgtc
cagtccccagagaaagatgtgggcgtggcctcccccgggatgctgcagactccgccctct
gactccgcccccttcgaggggctcaaatcagatgaggaggaggaggaggaggcggggcag
gaggaggaggaggggccctacctggatcccgagctagatgatcggctacccttcttgcct
caaaggtcacgccaaggtgtggccgttgatgatgaggaactggctgcctttcacttcccg
ccctcccctgcaagagctgaggaagcccttaagagctgtgagtggaagccgctgttgtgt
gcagaactactggaaacccacaccatgtatgtgtacacgaatattcttctgatagcggca
ggtgttgttccgtttctagctgttttgtgttgtcagacccggccgggagctgtggcagag
cccagcttaggaatggtctctgcctgtacagcacacaggtacctggtgctggagggcgac
gagggggcgggggagagcagtaccgacgacggcctcttgggcggccccggcgagctgggg
gaacgccgggggtcggccggcgacgcgggcatcgacctgaggaagctgctgtcgccgtcc
tcgctgcccgccagcgctcctgacttcggccgacaagtcatgacgcacatccgggtgttg
caggccagcctgcaccatctcaaggaggtggagaccaagtataacctactatgccaaagg
ctggcaggatcagcttctgacacagacgaacacaaagacaagagttag
DBGET
integrated database retrieval system
