KEGG   Lepisosteus oculatus (spotted gar): 102684524
Entry
102684524         CDS       T07349                                 
Symbol
shq1
Name
(RefSeq) protein SHQ1 homolog isoform X1
  KO
K14764  protein SHQ1
Organism
loc  Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:loc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:loc03009]
    102684524 (shq1)
Ribosome biogenesis [BR:loc03009]
 Eukaryotic type
  Sno RNPs
   Box H/ACA snoRNPs
    102684524 (shq1)
SSDB
Motif
Pfam: SHQ1 SHQ1-like_CS DUF4123 Leuk-A4-hydro_C RRN3
Other DBs
NCBI-GeneID: 102684524
NCBI-ProteinID: XP_015202773
Ensembl: ENSLOCG00000009970
UniProt: W5MUY3
LinkDB
Position
LG5:21767017..21843374
AA seq 626 aa
MITPIFEITQESDFLIISIRVPYTRTSEFDLYIDGEDFKFYAKPYFLRLTLPGRIVEDGR
EKASFDVGKGIFTLRVPKETPGEPFEGLQMLTSLLAPKGSRSAKPLVEETELSGECVAES
DEEDFDWEVDQEVQVEITEEELGRLYKYGFGNQRAGIFTRLQDELSDVIDVKSPDSTSAA
ERRQGRLAAETAKFEPDHYLADLFEDDAVQNVLKYRPWWVEVESKKKIKEEITQGHDGGE
GAMFFSEEEKEQLRKFSNKSYLLDKKATHQVWISLVDIILAYVYEVRVTEGEKNVESPWN
IRKLSGTLSWLETYNSVQEVLVSFGRRVLCYPLYRHFALIKAAIEDAAVIFELGKVCVLK
CLLDIHKVFRENDPAYILNDLYITDYCVWIQKAKSKKVRALTEYLKKATLRKSDLELELD
ELETAAQLVKVEEEEEDSRQAARYRESIPESDSEEDSEEDDGSSSSSSSSAETDECSSDK
EDSLDRLQSCVLEKASPPRAANIPEANPVTQHLDCEAGPRGEEEPLFLKLPGFPLSQPMP
RKLIEELGDQVCSVVRISEQPEGTDSRGCDVVQGERDKPSVQSAEHTVLRPATAETAASQ
GTFLEVCPQRNPLLIIADCDDDVEGS
NT seq 1881 nt   +upstreamnt  +downstreamnt
atgataactcctatatttgagataactcaagaatcggatttcctcatcatcagtattcgt
gttccttacacacgaacttcagagtttgacctatacatcgatggcgaggatttcaaattt
tatgccaagccatacttcctaaggctcaccctccctgggagaattgtagaggatgggaga
gaaaaagcctcttttgatgtcggtaaaggtatttttaccttgcgggttcctaaagaaact
ccaggagagccttttgaaggacttcagatgctgacctctcttcttgcacccaagggctcg
agatctgctaagcctctagtggaagaaacagagctctctggagaatgtgtggcagaaagt
gatgaagaagattttgactgggaggtagatcaggaagtacaagtagagatcactgaagaa
gaacttggcaggctttacaaatatggctttggaaatcaacgagctgggattttcaccaga
ctgcaggacgagttgagtgatgtcattgatgtgaagagtccagacagcacctcagctgct
gagcgcagacagggccgtttggctgctgagactgccaagtttgaacctgaccattacctg
gcagacttgtttgaagatgatgcagtccagaacgtgctgaaatacagaccctggtgggtt
gaagtggagagtaaaaagaagataaaggaagaaatcactcaaggccatgatgggggtgaa
ggagccatgtttttttctgaagaggaaaaggagcagctcagaaaattcagcaataaatcc
tacctgctcgataaaaaagccacccatcaggtgtggatcagcctggttgatataatcctg
gcatacgtctatgaggtccgtgtcacagaaggggaaaaaaatgtggagtctccatggaat
atcagaaaactgagtggaacactgagctggctggagacatacaactctgtccaggaggtc
ttggtatcatttggaagaagagtgctgtgttacccattgtatagacactttgctctcatt
aaggcagctatagaagatgcggcagtgatatttgagttaggaaaagtctgtgtcctgaaa
tgtttgttagacattcacaaggtcttcagggagaatgaccccgcttacatcctcaacgat
ctctacatcacagattactgcgtgtggattcaaaaggccaagtccaaaaaagtcagggct
cttactgagtacttaaagaaagccacactccgcaaatcagacctggaattagaactggat
gagctggaaactgcggcgcagctggtgaaagtagaagaggaggaggaagactcgagacaa
gcagccaggtacagggagagcattccagaatcagacagcgaggaggactccgaggaagac
gatggctctagcagcagcagcagctcctccgcagagacagatgagtgcagctctgacaag
gaggacagccttgacaggctgcagagctgcgttctggaaaaggctagcccgcctcgagca
gcaaatattcctgaggcaaatccagtcactcagcatttagactgtgaggcaggacctcgg
ggtgaggaggaaccattatttttgaagttaccaggcttccctctgtctcagccaatgccc
agaaaactgatagaagagctgggggaccaagtgtgctcagtggtgaggatctccgagcag
cctgaaggcaccgattccaggggctgtgatgttgttcagggagaacgagacaagccttct
gtgcaatctgcagagcacacagtgctgaggccagcaacagcagaaaccgcagcttctcag
gggacttttttagaggtgtgtcctcagagaaaccctttgctaatcatagcagactgtgat
gatgatgtagaaggttcgtag

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