Lepisosteus oculatus (spotted gar): 102684524
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Entry
102684524 CDS
T07349
Symbol
shq1
Name
(RefSeq) protein SHQ1 homolog isoform X1
KO
K14764
protein SHQ1
Organism
loc
Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
loc03009
]
102684524 (shq1)
Ribosome biogenesis [BR:
loc03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
102684524 (shq1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SHQ1
SHQ1-like_CS
DUF4123
Leuk-A4-hydro_C
RRN3
Motif
Other DBs
NCBI-GeneID:
102684524
NCBI-ProteinID:
XP_015202773
Ensembl:
ENSLOCG00000009970
UniProt:
W5MUY3
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Position
LG5:21767017..21843374
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AA seq
626 aa
AA seq
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MITPIFEITQESDFLIISIRVPYTRTSEFDLYIDGEDFKFYAKPYFLRLTLPGRIVEDGR
EKASFDVGKGIFTLRVPKETPGEPFEGLQMLTSLLAPKGSRSAKPLVEETELSGECVAES
DEEDFDWEVDQEVQVEITEEELGRLYKYGFGNQRAGIFTRLQDELSDVIDVKSPDSTSAA
ERRQGRLAAETAKFEPDHYLADLFEDDAVQNVLKYRPWWVEVESKKKIKEEITQGHDGGE
GAMFFSEEEKEQLRKFSNKSYLLDKKATHQVWISLVDIILAYVYEVRVTEGEKNVESPWN
IRKLSGTLSWLETYNSVQEVLVSFGRRVLCYPLYRHFALIKAAIEDAAVIFELGKVCVLK
CLLDIHKVFRENDPAYILNDLYITDYCVWIQKAKSKKVRALTEYLKKATLRKSDLELELD
ELETAAQLVKVEEEEEDSRQAARYRESIPESDSEEDSEEDDGSSSSSSSSAETDECSSDK
EDSLDRLQSCVLEKASPPRAANIPEANPVTQHLDCEAGPRGEEEPLFLKLPGFPLSQPMP
RKLIEELGDQVCSVVRISEQPEGTDSRGCDVVQGERDKPSVQSAEHTVLRPATAETAASQ
GTFLEVCPQRNPLLIIADCDDDVEGS
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgataactcctatatttgagataactcaagaatcggatttcctcatcatcagtattcgt
gttccttacacacgaacttcagagtttgacctatacatcgatggcgaggatttcaaattt
tatgccaagccatacttcctaaggctcaccctccctgggagaattgtagaggatgggaga
gaaaaagcctcttttgatgtcggtaaaggtatttttaccttgcgggttcctaaagaaact
ccaggagagccttttgaaggacttcagatgctgacctctcttcttgcacccaagggctcg
agatctgctaagcctctagtggaagaaacagagctctctggagaatgtgtggcagaaagt
gatgaagaagattttgactgggaggtagatcaggaagtacaagtagagatcactgaagaa
gaacttggcaggctttacaaatatggctttggaaatcaacgagctgggattttcaccaga
ctgcaggacgagttgagtgatgtcattgatgtgaagagtccagacagcacctcagctgct
gagcgcagacagggccgtttggctgctgagactgccaagtttgaacctgaccattacctg
gcagacttgtttgaagatgatgcagtccagaacgtgctgaaatacagaccctggtgggtt
gaagtggagagtaaaaagaagataaaggaagaaatcactcaaggccatgatgggggtgaa
ggagccatgtttttttctgaagaggaaaaggagcagctcagaaaattcagcaataaatcc
tacctgctcgataaaaaagccacccatcaggtgtggatcagcctggttgatataatcctg
gcatacgtctatgaggtccgtgtcacagaaggggaaaaaaatgtggagtctccatggaat
atcagaaaactgagtggaacactgagctggctggagacatacaactctgtccaggaggtc
ttggtatcatttggaagaagagtgctgtgttacccattgtatagacactttgctctcatt
aaggcagctatagaagatgcggcagtgatatttgagttaggaaaagtctgtgtcctgaaa
tgtttgttagacattcacaaggtcttcagggagaatgaccccgcttacatcctcaacgat
ctctacatcacagattactgcgtgtggattcaaaaggccaagtccaaaaaagtcagggct
cttactgagtacttaaagaaagccacactccgcaaatcagacctggaattagaactggat
gagctggaaactgcggcgcagctggtgaaagtagaagaggaggaggaagactcgagacaa
gcagccaggtacagggagagcattccagaatcagacagcgaggaggactccgaggaagac
gatggctctagcagcagcagcagctcctccgcagagacagatgagtgcagctctgacaag
gaggacagccttgacaggctgcagagctgcgttctggaaaaggctagcccgcctcgagca
gcaaatattcctgaggcaaatccagtcactcagcatttagactgtgaggcaggacctcgg
ggtgaggaggaaccattatttttgaagttaccaggcttccctctgtctcagccaatgccc
agaaaactgatagaagagctgggggaccaagtgtgctcagtggtgaggatctccgagcag
cctgaaggcaccgattccaggggctgtgatgttgttcagggagaacgagacaagccttct
gtgcaatctgcagagcacacagtgctgaggccagcaacagcagaaaccgcagcttctcag
gggacttttttagaggtgtgtcctcagagaaaccctttgctaatcatagcagactgtgat
gatgatgtagaaggttcgtag
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