Lepisosteus oculatus (spotted gar): 102684534
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Entry
102684534 CDS
T07349
Symbol
fmr1
Name
(RefSeq) fragile X mental retardation protein 1 isoform X2
KO
K15516
fragile X mental retardation protein
Organism
loc
Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
loc03019
]
102684534 (fmr1)
Messenger RNA biogenesis [BR:
loc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
102684534 (fmr1)
Factors involved in mRNA localization
Other mRNA localization factors
102684534 (fmr1)
mRNA cycle factors
Stress granule specific factors
102684534 (fmr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
FXMR_C2
KH_9
Tudor_FRX1
KH_1
Agenet
KH-I_KHDC4-BBP
KH_2
DUF7636
Motif
Other DBs
NCBI-GeneID:
102684534
NCBI-ProteinID:
XP_006632990
Ensembl:
ENSLOCG00000015397
LinkDB
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Position
LG7:50167523..50183594
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AA seq
574 aa
AA seq
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MEELAVEVRGTSGAFYKAFVKDVHDDSVTVTFENNWQPERQIPFHDVRFPPPSGFQKEIN
ESDEVEVYSRANDKEPCGWWLARVRMVKGEFYVIEYAACDATFNEIVTIERLRPVNPNKP
ATKNTFLKVRMDVPDDLRQMCAKESAHKDFKKAVGAFNVTYDSDKNQLVILSINEVTAKR
ATMLSDMHFRSLRTKLSLMLRNEEASRQLESSRQLASRFHEQFVVREDLMGLAIGTHGAN
IQQARKVPGVTTIDLDEETCTFHIYGEDQEAVRKARSYLEFSEDVIKVPRNLVGKVIGKN
GKLIQEVVDKSGVVRVRIEAENDRKNPQDEQGMVPFVFVGTKESISNARVLLDYHLNYLK
EVDQLRLERLQIDEQLRQIGGGSRPQAGRSDKDKGFVSDDGPGVGPSRGGKPYGSRGRGR
RGPGFASGTNSEASNASETESDHRDELSDWSLAPTDEERDVFTRRGDGRKRGGGSRGRGG
RGRGGYKGNEEIQWNESRARNSRDPKPRQQEDSLQIRIDSNNERSVHTKALQSSFADSGT
SNSSSRPRPGKDRGPKKEKQDSLDAPRVLVNGVS
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atggaagagttagccgtggaggtccgaggaacaagtggagccttttataaggcatttgtg
aaggatgtgcatgatgattctgtcacggtgacatttgaaaataattggcaaccagagaga
cagattcctttccacgatgttcggtttccccctccttcagggtttcagaaagaaataaat
gagagtgatgaagtagaggtgtattccagagccaatgacaaagagccctgcggatggtgg
ttggcccgcgtcaggatggtaaagggggagttttatgtcatagaatatgcagcctgtgat
gctaccttcaatgaaattgtcacaatagaaaggctacgacctgtgaaccctaataagcca
gctacaaaaaacacgttcctcaaagtcagaatggatgtaccggacgacctaaggcaaatg
tgtgcaaaggaatcagcacacaaagatttcaaaaaggctgttggagcatttaatgtgaca
tacgattcagacaaaaaccagttagttattttgtctatcaacgaagtaacagcaaagaga
gcaaccatgctgagcgatatgcacttcagaagtctgcgcaccaagttatctctgatgttg
aggaacgaagaagccagcaggcagctagaaagttcccggcagctggcctcccgtttccat
gagcagtttgttgtgcgggaagacctgatgggcttggccattggcactcatggtgccaac
atccagcaggcaaggaaggtgcctggagtgactaccatcgaccttgatgaagaaacctgc
actttccacatctacggagaggaccaggaagcagtgaggaaagctcgcagttaccttgag
ttttctgaagatgtaataaaagtaccaaggaatttagtaggtaaagttattggaaaaaac
ggaaaacttattcaggaggttgtggataaatctggtgttgtccgagtccgaattgaggct
gagaatgacagaaagaacccacaggacgagcaaggtatggtgccattcgtgtttgttgga
acaaaggaaagtatttcaaatgcccgagtgctgctggactatcacctcaattacttaaag
gaggtggatcagcttcgtctggagagattgcagattgatgagcaactccggcagatcgga
ggggggtcgaggccccaggctggccgctcagataaggacaagggctttgtcagcgatgac
gggcccggggtggggccctcccgaggggggaagccgtatggcagcagaggccgtggcagg
cgtgggcctggctttgcatcaggcaccaactctgaagcatccaatgcgtcggagactgag
tcggaccatagggacgagttgagcgactggtccctggcacccacagacgaagagagagat
gtgttcactcggcgtggcgatgggcgtaaacggggtgggggctccaggggtcgagggggt
cgaggccgtggagggtataaaggaaatgaggagatacagtggaacgaatcccgggcccgt
aactctagagaccctaaaccaaggcagcaggaggattctttgcagatcaggattgacagc
aataatgagaggagcgttcacactaaagcacttcagagttcctttgctgacagtggaaca
agcaacagcagcagccggccaagacccggcaaagaccgtgggccgaagaaagagaagcag
gacagtctggatgccccgagagtgctggtgaacggagtgtcatag
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