Lepisosteus oculatus (spotted gar): 102684706
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Entry
102684706 CDS
T07349
Symbol
vps36
Name
(RefSeq) vacuolar protein-sorting-associated protein 36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
102684706 (vps36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
loc04131
]
102684706 (vps36)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
loc04147
]
102684706 (vps36)
Membrane trafficking [BR:
loc04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
102684706 (vps36)
Exosome [BR:
loc04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
102684706 (vps36)
Exosomal proteins of colorectal cancer cells
102684706 (vps36)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
NAI2_C
DUF1351
MA3
BBL5_2nd
V-ATPase_G_2
DUF5847
Motif
Other DBs
NCBI-GeneID:
102684706
NCBI-ProteinID:
XP_006628254
Ensembl:
ENSLOCG00000008718
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All DBs
Position
LG3:15343132..15359484
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AA seq
382 aa
AA seq
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MDRFVWSNGLLEMNETLVIQQRGVRLYDGDEKAKLDVGTALLSTHRLIWRDQKNHECCIA
VPLSQVIFFEEQAAGIGKSAKIVIHLHPVSPNKEPGPYQNSKYSHIKLSFKEHGQIEFYR
RLSEEMTRRRWEQTPASQAIPTGTGTQAGRTRAVGIVGIERKLEEKRKETDKNISEAFED
LSKLMEKAKEMVELSKSIANKIKEKQGDITEDETIRFKSYLLSMGIANPVTRETHGSGTH
YHMQLAKQLGDMLLVPLQERGGMMALTEVYCLVNRARGMELLSPEDLVNACKMFESLKLP
LRLRVFDSGVMVVQLQSHSEEEMIASALDNVTEKGSLTSEEFAKLLGLSVLLAKERLLLA
EKMGHLCRDDSVEGLRFYPNLF
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggaccggttcgtgtggtctaatggcttgttggaaatgaacgaaactttagtgattcag
cagagaggagtcaggctgtatgacggagatgagaaggctaagcttgatgtggggacagct
cttctgagtacacaccgattaatctggagggaccaaaagaatcatgagtgctgtatcgcc
gttcctctgtcacaggttatattctttgaggagcaggcagctgggattggaaaaagtgct
aaaatagtaattcaccttcaccctgtatcacctaataaggagccgggaccgtaccaaaac
agcaagtattcccacataaaactgtccttcaaagagcatggtcagattgagttttacagg
cggctgtcagaagaaatgactcggaggcgatgggaacagactccagcctcccaggccatt
cccactggtactggaacccaggcaggaagaacccgggctgttggaattgtgggtattgag
aggaagctggaggaaaagcgaaaagagacggacaaaaacatttcagaggcttttgaagat
ctcagcaagcttatggaaaaggcaaaagaaatggtagaattatccaaatccatagctaac
aaaatcaaagaaaaacaaggggacatcacagaagatgagactatccgatttaaatcttat
ctattgagtatgggcatagcaaacccagtcaccagggaaacccatggctctgggacacat
taccacatgcagctagccaaacagctgggagacatgctgctggtccctctgcaggagaga
ggaggcatgatggctttgactgaagtttattgtttagtcaatcgagcccgtgggatggag
ttgctatccccggaggatttggtaaatgcctgcaaaatgtttgagtccctgaagctgcct
ttgaggttacgagtttttgacagtggtgttatggttgttcagctacagtcccatagtgaa
gaagaaatgattgcttcagcacttgataatgtgactgaaaaaggctctctgacctcagaa
gagtttgcaaaacttctaggactctcagttcttcttgcaaaagagaggctgcttcttgct
gagaagatgggacacctttgcagagatgattctgtggagggcttgcgattttatcccaac
ttgttctaa
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