Lepisosteus oculatus (spotted gar): 102684780
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Entry
102684780 CDS
T07349
Symbol
myo5b
Name
(RefSeq) unconventional myosin-Vb
KO
K10357
myosin V
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
102684780 (myo5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
loc03019
]
102684780 (myo5b)
04131 Membrane trafficking [BR:
loc04131
]
102684780 (myo5b)
03029 Mitochondrial biogenesis [BR:
loc03029
]
102684780 (myo5b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
loc04812
]
102684780 (myo5b)
Messenger RNA biogenesis [BR:
loc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
102684780 (myo5b)
mRNA cycle factors
P-body specific factors
102684780 (myo5b)
Membrane trafficking [BR:
loc04131
]
Others
Actin-binding proteins
Myosins
102684780 (myo5b)
Mitochondrial biogenesis [BR:
loc03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
102684780 (myo5b)
Cytoskeleton proteins [BR:
loc04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
102684780 (myo5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
IQ
DIL
Myosin_N
nSTAND3
AAA_16
AAA_22
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
102684780
NCBI-ProteinID:
XP_015195763
Ensembl:
ENSLOCG00000012796
LinkDB
All DBs
Position
LG2:complement(54427067..54537841)
Genome browser
AA seq
1808 aa
AA seq
DB search
MSVNELYTKYTRVWIPDPEDVWKPAEITKDYKEGDRVMHLKLEDETTLEYPINPKDNQLP
FLRNPDILVGENDLTALSYLHEPAVLHNLKVRFLESNHIYTYCGIVLVAINPYEQMPIYG
DDVIYAYSGQNMGDMDPHIFAVAEEAYKQMARDEKNQSIIVSGESGAGKTVSAKYAMRYF
ATVGGSASDTNVEEKVLASSPIMEAIGNAKTTRNDNSSRFGKYIQIGFNKRYYIIGANMR
TYLLEKSRVVFQAEDERNYHIFYQLCASASLPEFKDLSLTSAEDFFYTSQGENIFIDGVN
DAKDFEKTRKAFTLLGVKESHQMNLFKIIASILHLGNVDIRSERDGDSCYIPKGDEHLNH
YCDLLGVEHDQMEHWLCHRKLVTTAETYVKPMSRQHALNARNALAKHIYAELFNWIVEHI
NKALYTSTKQHSFIGVLDIYGFETFEVNSFEQFCINYANEKLQQQFNSHVFKLEQEEYMK
EQIPWTLIDFYDNQPCIDLIEAKLGILDLLDEECKVPKGTDQNWAQKLYDRHSNCQHFQK
PRMSNTSFIIVHFADKVEYQCDGFLEKNRDTVYEEQINILKASKFQLVADLFQDGKDTPV
PTPSSKGSKINVRAAKPALKAPNREHRKTVGHQFRNSLHLLMETLNATTPHYVRCIKPND
EKKAFSFDSSRAVQQLRACGVLETIRISAAGYPSRWTYPDFFNRYRVLMKKKDATNSDKK
AVCRNLLETLIKDPDKFQFGKTKIFFRAGQVAYLEKLRADKFRSACIKIQKTVRGWLQRV
KYRKIRKSAITLQRYGRGYLARRLAEQLRRTRATLVFQKQRRMVRDRRAYLGVRQAVITI
QAFARGMFTRRIYQEFLLHHKAVIIQKTVRGWLERKKFQRARNAAITIQCAYRRLQAKRQ
LKQLKIEARSAEHLKKLNIGMENKIVQLQRKMDEQSKEHKAQTEQLAAANSTFATEVGKL
QKELELFRSRQGDSNQLSSLQEEVERLRAELERAQAQHTQLEEEHSTEKASLLQRVEDLE
KENTLLKEEKEEMNQKILRQSKNNADQVTSVSQKETHLQSELEEERRRYQNLVKEYSRLE
QRYENLQDEVSLAKFHPGHRRNPSNQSSLESDSNYPSISTSEVGDTDDAIQQVEDMGLEK
AAMDMSLFMKLQKRVRELEQERRRLQADMEKMEELVKRKGNEHKSTADQDEDRNADSAYN
SLKRQELESENKKLKNDLNELRKAIAERATQNNSSNELQESYNLLLNQLKAANEELEVRK
EEVLILRTQIVSSAQQKEPDKRIEPSTMPEWNNSNKNMNRDEAIQAYHGMCESKNKAQDW
GYLNEDGELGLAYQGLKQVARLLEGQLQTQSRQHEDELVALRTQIEVLKDDIERKQELLS
QTLSLSPEAQVEFSIQQEITRLTNENLDLKELLEKLEKNEKKLKKQLRIYMKKVQELEVS
QTSEKTERPRHELTRQVTVQRKDKDFEGMLEYCKEDEALLVKILITDMKPQMVSATVPCL
PAYILFMCIRHADYMNDDQKVHSLLTSTINAIKKVLKKHNDDFETTSFWLANTSRLLHCL
KQYSGDEAFMTQNSSKQNEHCLKNFDLAEYRQVLSDLSIQIYQQLIKVAEGMMHPMIVSA
MLESESIPSLAGVKPMGYRHRSSSMDGDSYSLEGLIRQLGIIQGTMCDHGLDPEIIRQVF
KQLFYMINAVTLNNLLLRKDVCSWSTGMQLSAHRAAPHYKFLIVSLDPSLQVVKILNLYT
PLNEFEERVTVSFIRDIQGLLRDRNDPPHLLVDTKHTFPVLFPYTPSALSLETLHIPANL
GLDFLTRV
NT seq
5427 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtcaacgaactctatacaaagtacaccagagtgtggattccagatcctgaagat
gtctggaagccagctgaaatcaccaaagactacaaggagggggaccgggtcatgcatctc
aaactcgaagatgaaacgacgctggagtatcccatcaaccccaaggacaaccagctgcct
ttcctgcgaaacccagacatcctggtgggggagaacgacctgacggccctcagctacctc
cacgagcccgccgtcctgcacaacctgaaggtgcgcttcctggagtccaaccatatctac
acctactgcgggattgttcttgttgccataaacccttatgagcagatgcccatctatgga
gacgatgtgatctacgcctacagcggccagaacatgggtgacatggacccccacatcttc
gcggtggcagaagaggcttacaagcagatggctagagatgagaagaaccagtccatcatt
gtgagtggagagtcaggggcagggaagaccgtgtctgccaagtacgccatgcgatacttt
gccactgtgggcgggtcagccagcgacaccaatgtggaagagaaggtgcttgcctccagc
ccaatcatggaggccattggaaatgccaaaaccacccgaaacgacaacagcagccgtttc
ggaaaatacattcagatcggcttcaacaagcgatattacatcatcggagccaacatgagg
acttacctactggagaagtcgagagtggtctttcaggctgaagatgagagaaactatcac
atattttatcagctgtgcgcctctgctagcctgcccgagtttaaggatctctcattgacc
tcggcagaggacttcttctacacctcgcagggcgagaacatcttcattgatggggtgaac
gacgccaaggacttcgagaagaccaggaaagccttcacgctgctcggtgtgaaggagagt
caccagatgaacctctttaagattattgcctccatcctccacctgggcaacgtggacatc
cggtcagagcgcgacggtgactcctgctacatccctaaaggcgacgagcacctgaaccac
tactgcgacctgctgggcgtggagcacgaccagatggagcactggctgtgccaccgcaag
ctggtgaccacggcggagacctacgtcaagcccatgtccaggcagcatgccctcaacgct
cgcaacgcgctcgccaagcacatctacgccgagctcttcaactggatcgtggagcacatc
aacaaggcactgtacaccagcaccaagcagcactccttcatcggcgtgctggacatttac
gggttcgagacgtttgaggtcaacagtttcgaacagttctgtatcaactacgccaacgag
aagctgcagcagcagttcaactcacatgtcttcaaactggagcaggaggagtacatgaag
gagcagatcccctggaccctgatcgacttctatgacaaccaaccttgcatcgaccttatt
gaggccaagctgggcatcctggatctgctggacgaggagtgcaaggtgcccaaggggaca
gaccagaactgggcgcagaagctgtatgataggcattccaactgtcagcactttcagaag
ccaaggatgtctaacacctccttcatcatagtgcactttgcagacaaggtggagtaccag
tgtgacggattcctggagaagaaccgggacactgtgtatgaagagcaaatcaacatcctc
aaggccagcaagttccagctggtggctgacctcttccaagatggaaaagacactcccgtg
cccaccccttccagcaagggatccaagatcaacgtgagggctgccaagccggccctcaaa
gcccccaaccgcgagcacaggaaaaccgtggggcaccagttccgcaactcacttcacctg
ctcatggagacgctcaacgccaccacccctcactatgtgcgctgcatcaagcccaacgac
gagaagaaggccttctcgtttgactccagcagagcagtgcagcagctgcgggcctgtggg
gttctggagaccattcggatcagcgccgctgggtatccatccaggtggacctacccagac
ttcttcaacaggtaccgggtgctgatgaagaagaaggacgctacaaattcagacaaaaaa
gctgtttgcaggaacctgctggagaccctgattaaggaccccgacaaattccaatttggc
aaaaccaagatcttcttccgagctggccaggtggcctacctggagaagctgcgggcggac
aagttccgctcggcctgcatcaagatccagaagacggtgcgcggctggctgcagagggtc
aagtacagaaagatccggaagtccgccatcaccctgcagagatatggccgaggttacctg
gcccgcaggctggcggagcagctgagaaggacgcgggccaccctggtgttccagaagcag
cgcaggatggtgcgcgaccggcgggcctacctcggagtgcggcaggccgtcataaccatt
caggccttcgcgagaggcatgttcaccagacggatttatcaggagttcctgctgcaccac
aaggcggtgatcattcagaagactgtaagaggctggctggagaggaagaagtttcagcgc
gcccggaatgctgccatcaccatccagtgcgcgtacaggcgcctgcaggccaagaggcag
ctgaagcagctcaagatcgaggcgcgctcagcggagcacctcaaaaagctcaacatcggc
atggagaacaagatcgtgcagctgcagcgcaaaatggacgagcagagcaaggaacacaag
gcccagaccgaacagctggcggcagccaactccaccttcgccacagaggtggggaagctg
cagaaggagctggagctcttccgcagccggcagggagacagcaaccagctcagctccctg
caagaagaggtggagaggctgcgagcggagctggagagagcccaagcccagcacacacag
ctggaggaggagcactccacggagaaggccagcctcctgcagagagtggaggatctggag
aaggagaataccctgctgaaggaggagaaggaagagatgaaccagaagattctgcgccag
tccaagaacaatgcagaccaggtcaccagcgtctctcagaaggagacccacctgcagtcc
gagctggaggaggagcgccggcgctaccagaacctggtgaaggagtactcccggctggag
cagagatacgagaacttgcaggacgaggtctctctggccaagttccatcccggacacagg
aggaacccgtccaatcagagcagtctggagtcagactccaactacccctccatctccacc
tccgaggtgggcgacacagacgacgccatccagcaggtggaggacatgggcctggagaag
gcggccatggacatgagtctcttcatgaagctgcagaaacgcgtgagggagctggagcag
gagagacgccggctccaggctgacatggagaagatggaggagctcgtcaagcgcaagggg
aacgagcacaagagcacagcggatcaagatgaggaccgcaacgccgactcagcctacaac
agtctcaagagacaagagctggagtctgaaaacaagaagctgaagaatgacctgaacgag
ctgaggaaggccatcgccgagagggccacgcagaacaactcctccaatgagctgcaggag
agctacaatctgctgctcaaccagctcaaggcggccaatgaggagctggaggtgcgaaag
gaggaggtactaatcctgaggacgcagatcgtgagctccgcccaacaaaaggaaccagac
aaacgcattgaacccagcactatgcctgagtggaataacagcaacaagaacatgaacagg
gacgaggccattcaggcctaccatgggatgtgcgagtccaaaaacaaggcccaggactgg
ggctacttgaacgaagatggggagctgggcctggcctaccagggtttaaagcaagtcgcc
aggctgctggaaggccagctccagacacagagccggcagcacgaggacgagctggtggcc
ctgcgcacccagatcgaggtcctgaaggacgacatcgagaggaagcaggagctgctcagc
cagaccctctctctctcgcccgaagcgcaagtggagttcagcatccagcaggagatcacc
cggctcaccaacgagaacctggacctgaaggagctgctggaaaaactggagaagaacgag
aagaaactgaagaaacagctgaggatctacatgaagaaggtccaggagctggaagtatcc
cagacttcggagaagacggagaggccgcgccatgagctcacccggcaggtgacagtgcag
aggaaagacaaggatttcgagggcatgctggagtactgcaaggaggacgaggccctgctg
gtgaaaatcctcatcacagacatgaaaccgcagatggtgtcggccaccgtgccctgtctg
cctgcctacatcctcttcatgtgcattcgacacgccgactacatgaacgacgaccagaaa
gtgcactccctgctcacctccaccatcaacgccatcaaaaaagtgttaaagaagcacaat
gacgacttcgagacgacctccttctggctagcgaacacgagccgtctgctgcactgcctg
aagcagtacagtggggatgaggccttcatgacacagaactcgtccaagcagaatgaacac
tgcctgaagaacttcgacctggcggagtacaggcaggtcctcagcgacctctccattcag
atctaccagcagctcatcaaggtggcagagggcatgatgcaccccatgatagtgtcggcg
atgctggagagcgagagcatccccagcctggccggcgtgaagccgatgggctatcgccac
cgctcgtccagcatggacggggacagctactccctggaggggctgatccgccagctgggc
atcatccagggcaccatgtgtgaccacggcctggaccccgagatcatccggcaggtcttc
aagcagctcttctacatgatcaacgccgtcacgctcaacaacctgctgctcaggaaggac
gtgtgctcctggagcacaggcatgcagctcagtgctcaccgcgcagcaccacactacaaa
tttctcattgtctctcttgacccctccctgcaggttgtgaagattctcaacctatatact
cctttgaatgagtttgaagaacgagtcacagtatccttcattcgggacattcagggcctg
ctccgtgaccgcaacgatcctcctcatcttctggtggacaccaaacacaccttcccagtt
ctattcccctataccccttccgccctcagcctggagaccctacatatccccgccaacctt
ggcctggatttcctcacccgggtctga
DBGET
integrated database retrieval system
