Lepisosteus oculatus (spotted gar): 102684781
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Entry
102684781 CDS
T07349
Symbol
taf6
Name
(RefSeq) transcription initiation factor TFIID subunit 6
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
102684781 (taf6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
loc03021
]
102684781 (taf6)
03036 Chromosome and associated proteins [BR:
loc03036
]
102684781 (taf6)
Transcription machinery [BR:
loc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
102684781 (taf6)
Coactivators
SAGA/TFTC/STAGA complex
102684781 (taf6)
Chromosome and associated proteins [BR:
loc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
102684781 (taf6)
STAGA complex
102684781 (taf6)
TFTC complex
102684781 (taf6)
SAGA complex
102684781 (taf6)
SLIK complex
102684781 (taf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
TFIID-31kDa
CENP-S
Bromo_TP
Motif
Other DBs
NCBI-GeneID:
102684781
NCBI-ProteinID:
XP_015196314
Ensembl:
ENSLOCG00000014015
UniProt:
W5N9G6
LinkDB
All DBs
Position
LG2:complement(61140572..61150408)
Genome browser
AA seq
668 aa
AA seq
DB search
MAEERKQKQCVTVLPTESMKAMAESVGVSQLQEESCLALSEEVSYRIKEIAQDALKFMHH
GKRRKLTTSDIDYALKLKNVEPLYGFQSQEFIPFRFASGGGRELHFYEEKEVDLSDIINT
PLPRVPLDVSMKAHWLSIEGVQPAIPENPPPAPKEQQKAESTEPLKAVKPGQEEEGQIQG
KGQGATTAEAKGKEKCVLRLKPRSTHELSVEQQLYYKEITEACVGSCEAKRAEALQSIAT
DPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYLHELIPAV
VTCIVSKQLCLRPDVDNHWALRDFAARLMAQSCKTFSTTTNNIQSRITKTFTKSLLDDKT
QWTTRYGCIAGLAELGPDVIKTLIIQRLQVEGARIKAVMEGPVVSNIDKIGAEHVQSLLL
KHCASVIAKTRPLPDNPDQYRTDYGYLGSLLCSHVVKARAQAAMQAQQVNRTTLTITQPR
PTLTLSQSGSGGGVSRSPSIIKVPSSLTLPVQTLVSARPSTPTQPSPPPKFIVMSSSAGS
AQQVITLSSSQSGSSSSPITSTVPSSSSGLQPLVKLETSGGAGGTGVGGVSGTGAGAGSR
TVQKYIVVSLPSSSSSEVKGLNASLSSPSPSPTPTASLTSSSGALPSLEPTVKLERADSP
GASTHSPH
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggagcgaaagcagaagcagtgtgtgacggtgctgcccaccgagtccatgaag
gccatggctgagtcggtgggggtgtcacagctgcaggaggagtcctgcctggccctgagc
gaggaggtcagctaccgcatcaaggagattgctcaggatgcgctgaaattcatgcatcat
gggaagaggcgcaaactgacaacaagcgacatcgactatgccctgaagctgaagaatgtg
gagccgctgtatgggttccagtcccaggagtttatccccttccgttttgccagtggaggc
ggcagagagctgcacttctatgaggagaaggaggtggacctgagtgacatcatcaacacg
ccccttccccgggtgccactggatgtgtcgatgaaagctcattggctgagcattgaaggt
gtccagccagccatcccagagaacccgccaccagcaccaaaagagcagcaaaaggctgag
tctacagaacctctcaaggccgtgaagcccggacaggaagaggaggggcagattcagggc
aaaggtcaaggagcgacaactgcagaggctaaaggaaaggaaaagtgtgtgttgcgattg
aagccacgcagtacccatgagctgtccgtggagcagcagctctactacaaggagatcacc
gaggcctgtgtgggctcctgtgaggctaagagagctgaggccctgcagagcatcgccact
gaccctgggctgtaccagatgctgccacggttcagcactttcatctcggaaggggtgcgt
gttaatgtggtccagaataacctggcgctgctcatctacctgatgaggatggtgaaggca
ctgatggacaaccccactctctacctggagaaatacctccatgagttgatcccggcggtg
gtgacgtgtattgtcagtaagcagttgtgcttgcggccagacgtggacaatcactgggcg
ctgcgagacttcgccgccaggctcatggcccagagctgcaagaccttcagcaccaccacc
aacaacatccagtccaggatcacaaagacgttcaccaagagtttgctggatgacaagacg
cagtggaccacgcgctacggctgcatcgcagggctggctgagctgggccctgatgtgatc
aagactctgatcattcagagactgcaagtggagggggcccgcatcaaggccgtgatggag
gggcccgtcgtcagcaacatcgacaaaatcggggcagagcacgtgcagagcctgctgctg
aaacactgcgcaagtgtgattgcgaagacacggccacttcccgataacccagaccagtat
cgcactgactatggctacctcgggtcgctgctgtgctcccatgtggtgaaggccagggcg
caggccgccatgcaggcccagcaggtcaaccgcaccacactgaccatcacacagcctcgg
cccactctcaccttgtctcagagcggctccggcgggggcgtctctcgctcccccagtata
atcaaggtgcccagctccctcacgctgccagtccagacgctggtgtcagctcgcccctcc
acgccaacgcagccttcccctcctcccaagttcatcgtaatgtcatctagcgctggctct
gcgcaacaggtgatcactctcagctcgtcccagtctggcagcagctcctctcccatcacc
agcacggttcccagttcctcgtcaggcctgcagccactggtcaaactggagactagtggg
ggcgccggggggacaggagtagggggtgtgtccggtactggggctggggcaggctcccgc
acagtgcagaaatacattgtggtctctcttccttcctcctcttcctcggaggtcaaaggt
ctgaacgccagcctgagttccccctccccctcacccactcccacagcctccctcacctct
tcctctggcgccctgccctccctggagcccactgtcaagctggagagagcagactccccg
ggggccagtacgcactccccccactga
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