Lepisosteus oculatus (spotted gar): 102684806
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Entry
102684806 CDS
T07349
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A-like
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc04144
Endocytosis
loc04517
IgSF CAM signaling
loc04530
Tight junction
loc04810
Regulation of actin cytoskeleton
loc05100
Bacterial invasion of epithelial cells
loc05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
102684806
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
102684806
09144 Cellular community - eukaryotes
04530 Tight junction
102684806
09142 Cell motility
04810 Regulation of actin cytoskeleton
102684806
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
102684806
05100 Bacterial invasion of epithelial cells
102684806
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
loc04131
]
102684806
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
loc04812
]
102684806
Membrane trafficking [BR:
loc04131
]
Others
Actin-binding proteins
Arp2/3 complex
102684806
Cytoskeleton proteins [BR:
loc04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
102684806
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_Aladin
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_HPS5
EIF3I
Beta-prop_WDR75_1st
Beta-prop_NUP159_NUP214
Tricorn_2nd
RMC1_N
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
PEP5_VPS11_N
Rax2
Beta-prop_WDR36-Utp21_1st
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_WDR75_2nd
Motif
Other DBs
NCBI-GeneID:
102684806
NCBI-ProteinID:
XP_015211789
Ensembl:
ENSLOCG00000012417
UniProt:
W5N3T2
LinkDB
All DBs
Position
LG10:34656507..34665687
Genome browser
AA seq
359 aa
AA seq
DB search
MSLYSFGLDPLSCHAWNKDRTQIAISPNNNEVHIYQKKGKEWNKIHELKEHSGRITGIDW
APQSNLIVTCASDRNAYVWTLKEEGMVWKPTLVLVRINRAATCVKWSPLGNKFALGSGAR
IISVCYFDKGNNWWLSKHIKKPICSTILSLDWHPNNFLLAAGSADFHCRVFSAYIKDIEE
KPSPTAWGSKMPFGEVLLDQRDCGGWVHSVCFSPSGDSLAWVSHNSNISVADASKGKEVT
QLNTEHLPLLSVLYLSETEIVAAGHDCYPHQFSYTGVGSLKFVKKLTVPKQSSKASMSAM
QHFRNLDKKATAEEDNNEQETLHQNSITQLCIVKGEKSKVETFSSVGLDGAMVVWDFKH
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgtacagcttcggacttgatccgttgtcatgtcatgcctggaataaagaccga
actcaaatcgccatcagtcccaacaataatgaggtccacatttaccagaaaaaggggaaa
gaatggaataagatccatgagctgaaagagcacagtggtcgcatcacaggtatagactgg
gctccccagtccaacctcattgtgacctgtgcctctgacagaaatgcctatgtgtggacc
ctgaaagaggagggtatggtatggaagcccaccctggtgctggttcggatcaatagggcc
gccacctgtgtcaagtggtctccactagggaacaaatttgctttgggcagtggggcgaga
atcatctccgtttgttactttgataaggggaacaactggtggctgagcaagcacatcaag
aaacctatctgctccaccattctgagtcttgactggcaccccaataatttcctcctggct
gctggctctgcagactttcactgcagggttttctcagcttacatcaaggacatcgaggaa
aagccgagccccacagcctggggttccaagatgccattcggggaggtgctcctggaccaa
agggactgtgggggatgggtgcacagtgtctgcttctcaccctctggggatagcctggcc
tgggtcagtcacaacagcaacatcagtgtggctgatgcatctaagggcaaggaggtgacc
cagctcaacacagaacacctccctcttctcagtgtgctgtacctcagtgagactgagatt
gtggctgcgggacatgactgctaccctcatcagttctcctacacaggagtgggctccctg
aagtttgttaagaagctgactgtccccaaacagagctccaaagccagcatgtcagctatg
cagcacttccgcaatctggacaagaaagccaccgctgaggaggacaataacgaacaggag
actctgcaccagaatagcatcactcagctgtgtattgtcaagggggaaaaatccaaggtg
gagacgttcagtagtgtgggtctggatggagccatggtggtctgggattttaagcactaa
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