Lepisosteus oculatus (spotted gar): 102684806
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Entry
102684806 CDS
T07349
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A-like
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc04144
Endocytosis
loc04530
Tight junction
loc04810
Regulation of actin cytoskeleton
loc05100
Bacterial invasion of epithelial cells
loc05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
102684806
09144 Cellular community - eukaryotes
04530 Tight junction
102684806
09142 Cell motility
04810 Regulation of actin cytoskeleton
102684806
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
102684806
05100 Bacterial invasion of epithelial cells
102684806
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
loc04131
]
102684806
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
loc04812
]
102684806
Membrane trafficking [BR:
loc04131
]
Others
Actin-binding proteins
Arp2/3 complex
102684806
Cytoskeleton proteins [BR:
loc04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
102684806
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_1st
Beta-prop_HPS5
EIF3I
Beta-prop_WDR75_1st
Beta-prop_NUP159_NUP214
RMC1_N
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
PEP5_VPS11_N
Rax2
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_WDR75_2nd
Motif
Other DBs
NCBI-GeneID:
102684806
NCBI-ProteinID:
XP_015211789
Ensembl:
ENSLOCG00000012417
UniProt:
W5N3T2
LinkDB
All DBs
Position
LG10:34656507..34665687
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AA seq
359 aa
AA seq
DB search
MSLYSFGLDPLSCHAWNKDRTQIAISPNNNEVHIYQKKGKEWNKIHELKEHSGRITGIDW
APQSNLIVTCASDRNAYVWTLKEEGMVWKPTLVLVRINRAATCVKWSPLGNKFALGSGAR
IISVCYFDKGNNWWLSKHIKKPICSTILSLDWHPNNFLLAAGSADFHCRVFSAYIKDIEE
KPSPTAWGSKMPFGEVLLDQRDCGGWVHSVCFSPSGDSLAWVSHNSNISVADASKGKEVT
QLNTEHLPLLSVLYLSETEIVAAGHDCYPHQFSYTGVGSLKFVKKLTVPKQSSKASMSAM
QHFRNLDKKATAEEDNNEQETLHQNSITQLCIVKGEKSKVETFSSVGLDGAMVVWDFKH
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgtacagcttcggacttgatccgttgtcatgtcatgcctggaataaagaccga
actcaaatcgccatcagtcccaacaataatgaggtccacatttaccagaaaaaggggaaa
gaatggaataagatccatgagctgaaagagcacagtggtcgcatcacaggtatagactgg
gctccccagtccaacctcattgtgacctgtgcctctgacagaaatgcctatgtgtggacc
ctgaaagaggagggtatggtatggaagcccaccctggtgctggttcggatcaatagggcc
gccacctgtgtcaagtggtctccactagggaacaaatttgctttgggcagtggggcgaga
atcatctccgtttgttactttgataaggggaacaactggtggctgagcaagcacatcaag
aaacctatctgctccaccattctgagtcttgactggcaccccaataatttcctcctggct
gctggctctgcagactttcactgcagggttttctcagcttacatcaaggacatcgaggaa
aagccgagccccacagcctggggttccaagatgccattcggggaggtgctcctggaccaa
agggactgtgggggatgggtgcacagtgtctgcttctcaccctctggggatagcctggcc
tgggtcagtcacaacagcaacatcagtgtggctgatgcatctaagggcaaggaggtgacc
cagctcaacacagaacacctccctcttctcagtgtgctgtacctcagtgagactgagatt
gtggctgcgggacatgactgctaccctcatcagttctcctacacaggagtgggctccctg
aagtttgttaagaagctgactgtccccaaacagagctccaaagccagcatgtcagctatg
cagcacttccgcaatctggacaagaaagccaccgctgaggaggacaataacgaacaggag
actctgcaccagaatagcatcactcagctgtgtattgtcaagggggaaaaatccaaggtg
gagacgttcagtagtgtgggtctggatggagccatggtggtctgggattttaagcactaa
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