Lepisosteus oculatus (spotted gar): 102684915
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Entry
102684915 CDS
T07349
Symbol
lingo2
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2 isoform X2
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
loc
Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
loc04131
]
102684915 (lingo2)
Membrane trafficking [BR:
loc04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
102684915 (lingo2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
ig
Ig_2
LRR_9
Ig_C17orf99
LRR_RPS2
V-set
LRRNT
LRR_6
Ig_6
Big_6
Ig_5
DUF3557
Motif
Other DBs
NCBI-GeneID:
102684915
NCBI-ProteinID:
XP_006629870
Ensembl:
ENSLOCG00000012193
UniProt:
W5N2Y3
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Position
LG4:complement(52123382..52618002)
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AA seq
622 aa
AA seq
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MSLDRMVDCISKVMLHTAISCWQPFLGLALVVICIGSAIGCPARCDCSAQSKSVICHRKR
LMVIPEGIPIETKILDLSKNKLKSVNPDDFASYPLLEELDLSDNIIGNVEPGAFNTLYNM
RSLSLKSNRIKLIPLGVFTGLSNLTLLDISDNKIVILLDYMFQHLHNLKSLEVGDNDLVY
ISHRAFSGLLSLEHLTLERCNLTAVPTEALSHLYNLVSLSLRYLSINTLHAYSFKKLFRL
RHLEIDNWPMLDMFPANTLHSLNLTTLSVTNTNLSEVPFLALKHLSYLTHLNLSYNRISS
IEAGMFMDLIHLQELHMVGAQLVTIEPHAFQNLRSLRVLNVSHNRLDTLERSVFQAPENL
EMLCLDNNPLVCDCRLLWILQKRRSLSFCDTQPECMTPEGIRGTPFRDFPETLLSYYVTC
TKPKIRENKTQQLFINEGQTARMFCNAEGAPRPFVYWITPRRRLVTNKSNGRATVHDNGT
LEIKVSEVQDSGTYICVASNAAGNDTYSASLAVKGLASDRSLYANRTSLYYTDTNNTSPN
GTNVYNTTFALDLKTILVSTAMGCFTFLGVVLFCFLLLFVWSRGKGKHKNNIDIEYIPRK
SNGAVAEGAEQSGPRRFNMKMI
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgagccttgacagaatggtagactgcatcagcaaagtcatgcttcacacggctatatca
tgctggcaaccgttcttgggactggcccttgtggtgatctgcattggctccgccattgga
tgccctgcccgctgtgactgctcagcacagagcaagtccgtcatttgccatcggaaacgc
ctcatggtgatccctgagggtattcccattgagaccaagatccttgacctcagcaagaac
aagctgaaaagtgttaacccggatgactttgcctcttaccctcttctggaggaactggac
ctcagcgataacatcattgggaatgtggagcctggggccttcaacaccctgtacaacatg
cgttccctcagtctcaagagcaaccggatcaagctgatccccctgggtgtctttactgga
ttatctaatttaactctcttggatatcagtgacaacaaaatagttatcttgctagattac
atgtttcagcatttacataacctgaagtctttggaagtgggcgacaatgacctggtgtac
atttctcatcgggcctttagtgggctactcagcttggagcacctgaccttggagaggtgt
aacctgactgctgtgcccacagaagctctctcacacctatacaacctggtcagcctcagt
ctgcgttacctcagcatcaacactctgcatgcctactcttttaagaagctatttcgtctg
aggcacctagagattgataattggccaatgttggatatgttccctgcaaacaccttacac
agcctgaatctcaccacactgtctgttactaacaccaacttgtctgaggttccttttctt
gccttgaagcacttgtcgtatctcacacacctcaacctctcttacaaccgcatcagcagt
attgaggcaggcatgtttatggatctcatccatctgcaggagctacacatggttggagcc
cagttagttaccattgagcctcatgccttccaaaatttgaggtccctgagagtcctgaat
gtttctcataaccggctggacaccttggaaaggagtgtgttccaggcacctgaaaatctc
gagatgctctgcttggacaacaacccactggtgtgtgactgccgtctcctgtggatattg
cagaagaggcgttccctctctttttgtgacacacagcctgaatgcatgaccccagagggc
attcgagggacaccattcagggattttccggagacgcttctttcatactatgtaacatgc
acaaagccaaaaatccgtgagaataagacacagcagctgttcatcaatgagggacagaca
gcaagaatgttttgcaatgctgaaggagcacctcgaccctttgtttactggattacacca
cgtaggcgtctggttacaaataaatctaatgggagggcaacagttcatgacaatggcaca
ctagaaataaaggtttctgaggttcaggatagtggaacctatatttgtgtggccagcaat
gctgctggcaatgacacatattctgcctcattggcagtaaaaggccttgccagtgacagg
tcgctttatgcaaacaggacctctctgtattatacagatacaaacaacacttctccaaat
ggaactaacgtgtacaacacgacatttgccttggacctaaagaccattctagtgtcaaca
gcaatgggctgctttacgttccttggcgtggtcttgttttgcttcctgctcctttttgtg
tggagccgagggaaaggcaagcataaaaacaacattgacatagagtatataccccgaaaa
tccaatggggcagttgcagaaggggcagagcaaagtggcccccgccgatttaacatgaaa
atgatttag
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