Lepisosteus oculatus (spotted gar): 102685015
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Entry
102685015 CDS
T07349
Symbol
abcb9
Name
(RefSeq) ATP-binding cassette sub-family B member 9 isoform X1
KO
K05656
ATP-binding cassette, subfamily B (MDR/TAP), member 9
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc02010
ABC transporters
loc04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
102685015 (abcb9)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
102685015 (abcb9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
loc04131
]
102685015 (abcb9)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
loc02000
]
102685015 (abcb9)
Membrane trafficking [BR:
loc04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
102685015 (abcb9)
Transporters [BR:
loc02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
102685015 (abcb9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_22
ABC_ATPase
AAA_29
AAA_30
nSTAND1
AAA_25
RsgA_GTPase
AAA_15
Motif
Other DBs
NCBI-GeneID:
102685015
NCBI-ProteinID:
XP_015221600
Ensembl:
ENSLOCG00000005562
LinkDB
All DBs
Position
LG20:complement(7479365..7494725)
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AA seq
802 aa
AA seq
DB search
MRAVVAVACNLLFILADIMVTTLLYIRGTRISLFMEDLGNFDLFCSTVDLWVTLLVRVTL
LLGAAIGVSRNVTEGPRRVADSQNLAVILCLVVMVYAVTKLLLFSEHEASLTHSPWFLSL
FSWTCASSLGTVLLWKLLARVRPPRPSLKINAGSEDSGDRAPVLGPEDCSGDECEEEGEK
CSDKRKGESRSTATVSQLLAYCRKDAGLLGVAFLFLLISALCEAFIPYYTGQAIDGIVIH
KSMADFTKPIIYLTVFALVSSIAMGVRGGVFSLTFARLNVRLRNLLFRSLVHQEIGFFDE
NHTGDITSRLTSDTTQVSDLISENVNLFLRSLVKGVGYCIFMFGMSWKLSLVTLMGFPFI
AIVSKFYGEYYKKLAKEVQNSLAQANKVAEETISSMKTVRSFANEDAEADNYFAKLQEMF
QLNKRQAVAYACYMWCSCISELAMQVSILYYGGHLVVSGQMTGGTLISFVIYELELGECL
EDIASVYTGLMQGVGAAEKVFEFIDRKPKLSHNGQLAPDTCKGLVEFKNVTFSYPTRPDT
PILKDVSFTLRPGEVTALVGPSGSGKSSCVSLLENFYRPQQGEVFLDGHPVQEYQHSYLH
ARVSLVGQEPVLFARSVQNNITYGLTDCSMDAVVQAAIKANAHEFVTQLPNGYNTGVGEK
GAQLSGGQKQRVAIARALIRNPHVLILDEATSALDAESEYIVQQALNTIMHRHTVLVIAH
RLSTVEKAGNIIVIDKGWVVEQGSHKELMAMGGLYSKLVQRQVLGIETGADVLNPPKNSM
WHLGKSKLRKEESSDSEEDFRL
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgagggctgtggtcgccgtggcctgcaatctgttgttcatcctggccgacatcatggtc
accaccctcttgtacattcgtgggaccaggataagcctgttcatggaggacttgggtaac
ttcgacctgttctgttctacggtcgacttgtgggtgaccctcctagttcgggtcaccttg
ctgctgggggctgctatcggcgtgtcgaggaacgttacggagggcccccggagggtggca
gactcccagaacctggccgtcatcttgtgcctggtggtcatggtgtacgccgtcaccaag
ctcctgctcttttcggagcacgaggcctcgctgacgcacagcccctggtttctgagcctg
ttctcgtggacctgcgcctcctcgctggggacggtgcttctgtggaagctgctcgccaga
gtcaggccgcccaggccgtctctgaagatcaacgcgggcagcgaggactcaggagacagg
gcgccggtgctgggcccggaggactgcagcggcgacgagtgcgaggaggagggtgaaaag
tgcagtgacaagaggaagggagagtctcgttccacagcgacagtgagccaactcctggcc
tactgcaggaaggatgctggtctgctgggggtcgccttcttattcctcctcatctctgct
ttgtgtgaagccttcatcccttattacactggacaggcgattgatgggattgttattcat
aagagcatggcagacttcaccaaacccataatctatttgacagtctttgcacttgtaagc
tccattgcaatgggagttcgaggtggcgttttttccttgacttttgccagactgaatgtg
agattacgtaacctgctcttcaggtcgctggtccaccaggagattggattctttgacgaa
aatcacacaggcgacatcacctctcggctgacctcggacacgacgcaggtgagcgacctc
atctcggagaacgtcaacctgttcctgcgcagcctggtcaagggcgtgggttactgcatc
ttcatgttcggcatgtcctggaagctctccctggtcaccctaatggggttccccttcatt
gccattgtttccaagttctatggggaatactacaagaaactcgccaaggaggtgcagaac
tctctcgcccaggccaacaaggttgcggaggagacgatctcatccatgaagacggtcagg
agctttgccaacgaggatgcggaggccgacaactattttgcgaagcttcaggagatgttc
cagttgaacaagaggcaggctgtggcctacgcctgttacatgtggtgcagctgtatctca
gagctggccatgcaggtcagtattctttactatggaggacatttggtggtgtctgggcag
atgactggtggaaccctgatttcctttgtcatctatgagctggagttaggagagtgtttg
gaggacattgcgtcggtgtacacggggttaatgcaaggagtgggggctgcggagaaggtc
ttcgagtttatagaccggaagcccaaactgtcgcacaatgggcagctggctccagacact
tgcaaaggactagtggagttcaagaatgtaacgttctcctaccccacacgtcctgacaca
ccgatactaaaggatgtatccttcacgctgaggcctggcgaggtcactgcactggtgggg
ccctcaggcagtgggaagagctcctgtgtcagtctgctggagaacttctaccggccccag
cagggcgaggtgttcctggatggccaccctgtccaggaataccagcacagctacttgcat
gccagggtgtctctggtggggcaggagcctgtgctgttcgcccgctcggtccagaacaat
atcacctatggtctgactgactgctctatggatgcagttgtccaggcagctataaaagcc
aatgcccacgagttcgtgactcagttgccaaatggctacaatacaggggtcggggagaag
ggtgcccagctctccggcggtcagaagcagagagtggccatcgctcgcgccctgatccgg
aatccccacgtgctcatcctggacgaggccaccagcgccctggacgcggagagcgaatac
atcgttcagcaggctctgaacactatcatgcacagacacaccgtcctggtgattgcgcac
cgcctgagcacagtggagaaggcgggcaacatcattgtgatcgacaagggctgggtggta
gagcaaggctcccacaaggagttaatggcaatggggggcctctattccaaactggtccag
aggcaggtgctggggatagagacgggagccgatgttctgaaccccccaaagaacagtatg
tggcacctgggaaaatcaaaactgagaaaagaggagagcagcgattctgaggaagacttc
cgtttgtga
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integrated database retrieval system
