Lepisosteus oculatus (spotted gar): 102685094
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Entry
102685094 CDS
T07349
Symbol
cnot3
Name
(RefSeq) CCR4-NOT transcription complex subunit 3
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102685094 (cnot3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
loc03019
]
102685094 (cnot3)
Messenger RNA biogenesis [BR:
loc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
102685094 (cnot3)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
102685094 (cnot3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF4407
DUF4140
Motif
Other DBs
NCBI-GeneID:
102685094
NCBI-ProteinID:
XP_015194956
Ensembl:
ENSLOCG00000000005
LinkDB
All DBs
Position
Unknown
AA seq
565 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVAEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLVENRKLIETQMERFKIVERETKTKAYSKEGLGLAQKVDPAQKE
KEEVGQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKEKQDRIEELKRFIEKHRYHI
RMLETILRMLDNDSVQVESIRKIKDDVEYYLDSSQDPDFEENEFLYDDLDLEDIPQSLVA
TSPPGHSHMEDEIFNQSSSTPTSTTSSSPIPPSPANCTTENSEDDKKRGRSTDSEVSQSP
VKNGNPSSCSSSCSSSSSSTSSSSLLSMATVAGSAGAGGNSAGGNSLLGNMGGLLPGSGG
FPSGAQQQSQQQQSVSLCVTDLFSSSTAPPGPPAAPQATLSEVSIPPSLGVCPLGPVPLS
KDQLYQQAMQESAWTHMPHPSDSERIRQYLMRNPCPTLPFHHQVPPPHSDSVEFYQRLST
ETLFFIFYYLEGTKAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKTITDEFEQGTYIYFD
YEKWGQRKKEGFTFEYRYLEDRDLQ
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaagagaaaactacaaggtgaaatagatcgatgtctgaagaaagtcgcggaa
ggcgtggaacaattcgaggacatttggcagaagcttcacaacgcagccaatgctaaccag
aaggagaagtatgaggctgacctcaagaaggagattaagaagttacagcggctgcgagac
cagattaagacgtgggtggcatcaaacgaaatcaaggacaaacggcagctggtggagaat
cgcaaactaattgagacgcaaatggagcgcttcaagatcgtggagcgcgagaccaagacc
aaggcctattctaaggagggcctgggactcgcacagaaggtggacccggcgcagaaggag
aaggaggaagtcgggcagtggctgacgaacacgatcgacactctcaacatgcaggtggac
cagtttgagagtgaggtggagtctctttctgtccagaccaggaagaagaagggagacaaa
gagaagcaggaccgtattgaggagcttaagcgcttcatagagaagcaccgctaccacatc
cggatgctggagaccatcctgcggatgctggacaatgactctgtgcaggtggagtcgatc
cgcaagatcaaggacgatgtggaatactacctggactcctcgcaggaccccgattttgag
gagaacgagttcctgtacgacgaccttgacctggaagacatcccccagtctttggtggcg
acgtctcctccgggacactctcacatggaggacgagatcttcaaccagtccagcagcacc
ccgacctccaccacctcgtcctcgcccatcccaccatcgccagccaactgcaccacggag
aactcggaggatgacaagaagcgtggccgctccacggacagcgaggtcagccagtctcca
gtgaagaacggcaacccgtcctcctgctcctcctcctgctcctcctcctcttccagcacc
tcttcctcttcgctgctctccatggcaaccgtcgccgggagcgccggggcgggagggaac
agcgccgggggcaacagtctcctcggcaacatgggcggtctcctgcccggctcggggggc
ttcccctcaggggcgcagcagcagagccagcagcagcaatccgtctcactctgtgtcaca
gacctgttctccagctccactgctcccccgggtcccccggcggccccccaggccacgctc
tccgaggtcagtatcccaccctctctgggggtgtgtcccctggggccagtgcccctgtcc
aaggaccagctgtaccagcaggccatgcaggagtccgcctggacgcacatgcctcacccc
tctgactccgagaggatcaggcagtacctgatgaggaacccgtgccccactctgcccttc
caccaccaggtgcccccgccccactcggactcggtggagttctaccagcgcctgtccacc
gagacgctcttcttcatcttctactacctggagggcaccaaggcgcagtatctggcagca
aaggctctgaagaagcagtcctggcggtttcacaccaagtacatgatgtggttccagagg
cacgaggagcccaagaccatcacagacgagtttgagcagggcacgtacatctacttcgac
tacgagaagtggggccagaggaagaaggaggggttcaccttcgaatatcgctacctggag
gaccgcgacctgcagtga
DBGET
integrated database retrieval system
