Lepisosteus oculatus (spotted gar): 102685428 Help Entry 102685428         CDS       T07349                                  Symbol xrn2 Name (RefSeq) 5'-3' exoribonuclease 2   KO K12619   5'-3' exoribonuclease 2 [EC:3.1.13.-] Organism loc  Lepisosteus oculatus (spotted gar) Pathway loc03008   Ribosome biogenesis in eukaryotes loc03018   RNA degradation Brite KEGG Orthology (KO) [BR:loc00001]  09120 Genetic Information Processing   09122 Translation    03008 Ribosome biogenesis in eukaryotes     102685428 (xrn2)   09123 Folding, sorting and degradation    03018 RNA degradation     102685428 (xrn2)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:loc03021]     102685428 (xrn2)    03019 Messenger RNA biogenesis [BR:loc03019]     102685428 (xrn2)    03009 Ribosome biogenesis [BR:loc03009]     102685428 (xrn2)    03016 Transfer RNA biogenesis [BR:loc03016]     102685428 (xrn2) Transcription machinery [BR:loc03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      102685428 (xrn2) Messenger RNA biogenesis [BR:loc03019]  Eukaryotic type   mRNA degradation factors    5'-3' decay     5' exonucleases      102685428 (xrn2) Ribosome biogenesis [BR:loc03009]  Eukaryotic type   Pre-60S particles    RNases     102685428 (xrn2) Transfer RNA biogenesis [BR:loc03016]  Eukaryotic type   tRNA degradation factors    Rapid tRNA decay (RTD) pathway factors     102685428 (xrn2) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  XRN_M XRN_N Motif Other DBs NCBI-GeneID:  102685428 NCBI-ProteinID:  XP_015209039 Ensembl:  ENSLOCG00000016874 LinkDB All DBs Position LG1:complement(<50883640..50922891) Genome browser AA seq 846 aa AA seqDB search MGVPAFFRWLSRKYASIIVHAVEEKAKECNGVRIPVDTSKPNPNEVEFDNLYLDMNGIIH PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRVLYMAIDGVAPRAKMNQQRSRRFR ASKEGAELTEEKKRIREEIFQRGGYLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIAD RLNSDPGWRNLTVILSDASVPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLG LATHEPQFTIIREEFKPNKPRPCGMCGQLGHEIKDCQGLAREKKGEHDEFADTPPASEQE FIFIRLSVLREYLERELTMASLPFPFDIERSIDDWVFMCFFVGNDFLPHLPSLEIREGAI DRLVGIYKDVVHKTGGYLTENGFVNLERVELIMQAVGVAEDNIFKKRREDEESFRKRMKE KKKRMKGGERPAFLPSGQFAPQALGGRNAPRPVHNARQAAFDMRMQGRDQQNKNAALSLK AQMKNGNQSPSGSSDMADGRGVKRKAEDSDSEPEPEDNIRLWEEGWKQRYYKNKFDVDVT DEKFRRKVVKSYVEGLCWVLRYYYQGCASWKWYFPFHYAPFASDFKDIKDMFTEFESGTK PFKPLEQLMGVFPAASGNFLPQSWQRLMTEPDSSIIDFYPDDFAIDLNGKKFAWQGVALL PFVDERRLRAALEEVYPDLTPDEIQRNSLGSDLLFVGRSHPLSDFLKELYQTNSEESVEM SPELCHGISGTLTLDEDPVLPDKPVRSPIPVLRDVVENSAIGIKFKDPQYKEGFVFKATV LPGAKIPAKVLKPGDWEKSNRGPWRPQLGFNPDRRPAHLDQSAFRALSHNMSRDRKPGFY SNAPPP NT seq 2538 nt NT seq  +upstreamnt  +downstreamnt atgggagtcccagcattttttcgctggctgagtcggaagtatgcctcaattattgttcac gccgtggaggagaaggcaaaagaatgcaatggagttcgcataccagttgataccagcaaa cctaatccaaatgaagttgagtttgataatttgtacctggatatgaatggaattattcac ccatgcacgcatccagaagacaaacctgccccaaagaacgaagatgaaatgatggtggca atttttgaatacattgaccggctgtttaacattgttcgtcctagaagagtcctgtacatg gctattgatggagttgctcctcgtgccaaaatgaaccagcaacgatccaggaggtttcga gcctcaaaagaaggagctgagctgacggaggaaaagaagcgcataagagaagagattttt caaagaggtggatacctgcccccagaagaaattaaagagaggtttgacagcaattgcatt actccaggcacggagtttatggacaatcttgccaagtgcctgagatattacatcgctgat agattaaacagtgatccaggatggagaaatctaacggttattttgtctgatgcgagtgtg ccaggagagggagagcataaaatcatggattatattaggaggcaacgagcccagcccaac cacgaccccaatactcatcactgtctctgtggagctgacgctgatttgataatgctggga ctggcaacccatgagcctcagtttacgatcatcagagaagagttcaaaccaaacaagccg aggccctgtggcatgtgtggtcagcttggccacgagataaaagactgccagggtcttgca agggagaagaagggagagcatgatgaatttgccgataccccgccagcttcagaacaggag ttcatatttattcggctttccgttctgagagagtatttggagagagaattaactatggca agcttgccattcccttttgacattgaaagaagcattgatgactgggtgttcatgtgtttc tttgtgggtaacgacttcttgcctcatttaccatctctagaaatccgggagggtgcaatt gatcgactggtcggcatttataaggatgtggtacacaagacagggggatatcttacagaa aatggctttgttaacctggaacgagtggagctaattatgcaagctgtgggagtggcagag gacaacatttttaaaaaacggcgagaggatgaggaaagcttccgaaagagaatgaaggaa aagaagaagcgaatgaaagggggagagagaccagcttttttgccttcagggcaatttgct cctcaagctctgggagggagaaatgcaccacgacctgttcacaatgcaaggcaagctgca tttgacatgaggatgcaggggagagatcagcagaacaagaatgctgcattatcgttaaag gcccagatgaagaatggaaaccagtctccctcaggatccagtgatatggctgatggcagg ggggttaagagaaaagcagaagatagcgacagtgagcctgaaccagaggataatattagg ttatgggaagaagggtggaaacaacgttactataaaaacaagttcgatgttgatgtgact gatgaaaaatttcggcgcaaagtggtcaagtcttatgttgagggtctttgctgggtcctt agatattactaccagggctgtgcgtcctggaagtggtattttccctttcattacgcccca tttgcatcagacttcaaagacattaaggacatgttcactgaatttgaaagcggtactaaa ccgtttaagccactggagcagctgatgggagtgtttcctgcagccagtgggaacttcctc ccccagtcatggcagagactcatgaccgaaccggactcctccatcattgacttttatcca gatgactttgctatcgatttgaacggaaagaaatttgcttggcaaggcgttgctctgctg ccatttgttgatgagcgtcgactgagagctgccctggaagaggtctaccctgacctcact cctgatgaaattcagaggaacagtcttggtagtgatctgctgtttgtgggaaggtcccat cccctttcagactttttaaaggagttatatcaaacaaattcagaagagagtgtggagatg tctccagagctgtgtcatgggatctctggaactctcactttggatgaagacccagttctt ccagataagccagtgcgatcccccattccagtgttgcgagatgttgttgaaaacagtgca ataggaattaaattcaaggatccacaatataaagagggttttgtgtttaaggcgacagtc ctcccaggagcgaaaatacctgctaaagtcctcaaacctggggactgggaaaagtccaac cgcggtccttggagacctcagcttggatttaacccagacagacggccagcccacttggat cagtctgcattcagagcattaagccacaacatgtcgcgggatcgaaagcctggtttctac agcaatgcgccaccacct

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