Lepisosteus oculatus (spotted gar): 102685440
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Entry
102685440 CDS
T07349
Symbol
shmt2
Name
(RefSeq) serine hydroxymethyltransferase, mitochondrial
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc00260
Glycine, serine and threonine metabolism
loc00630
Glyoxylate and dicarboxylate metabolism
loc00670
One carbon pool by folate
loc01100
Metabolic pathways
loc01200
Carbon metabolism
loc01230
Biosynthesis of amino acids
loc01240
Biosynthesis of cofactors
loc04981
Folate transport and metabolism
Module
loc_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
102685440 (shmt2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
102685440 (shmt2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
102685440 (shmt2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
102685440 (shmt2)
Enzymes [BR:
loc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
102685440 (shmt2)
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GFIT
Motif
Pfam:
SHMT
Motif
Other DBs
NCBI-GeneID:
102685440
NCBI-ProteinID:
XP_015199812
Ensembl:
ENSLOCG00000006059
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All DBs
Position
LG4:complement(15173795..15200832)
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AA seq
502 aa
AA seq
DB search
MLSLTLRQFARPLVRRLPCATVAGARGQHAQPVAQRSEGPQWTGRESLAADDPEMWDLVQ
KEKDRQLRGLELIASENFCSRAALEAMGSCLNNKYSEGYPGKRYYGGAEVVDQIELLCQK
RALEAFDLDPKCWGVNVQPYSGSPANFAVYTAVLQPHDRIMGLDLPDGGHLTHGYMSDVK
RISATSIYFESMPYKLKLETGIIDYDQLEVTARLFRPRLIIAGTSAYARLIDYARMKKVC
SDVNAYLLADMAHISGLVAAKVIPSPFEHADIVTSTTHKTLRGVRSGLIFYRKGVRSVDK
KGKEVMYDLEDRINFSVFPSLQGGPHNHTIAGVAVALRQAAMPMFKEYSAQVLRNAKAMS
NALLKKGYTLVSGGTDNHLVLVDLRPKGMDGARAERVLELVSITANKNTCPGDKSALTPG
GLRLGAPALTSRHFKEADFEKVVDFMDEGFQIAIDVKKKTAKLQDFKTFLLQDPETKARI
ADLRQRVEQFARSFPMPGFESH
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcgttgacgctgaggcagtttgcgcgtcccttggtgcgccgcctgccctgtgcc
accgtggccggcgcccgcggtcagcacgcccagcccgtggcccagcggagcgaggggccg
cagtggaccggacgggagagcctggccgccgacgaccccgagatgtgggacctggtgcag
aaggagaaggaccggcagctgcgcggcctggagctcatcgcctcggagaacttctgcagc
agggctgccctggaggccatgggctcttgtctcaacaataagtattcagagggatatccg
gggaagaggtactacggtggcgcggaagtggtcgaccagattgagctgctctgccagaag
agagccctggaggcctttgacctggaccccaaatgctggggggtcaacgtgcagccctac
tccggctcccctgccaatttcgccgtgtacacggccgtcctgcagcctcacgaccgcatc
atggggctcgacctgcccgacggtggccacctcactcatggctacatgtctgacgtcaag
aggatttcagccacatctatttacttcgagtccatgccgtacaagctgaaactcgagacc
ggaataatcgactacgaccagctggaggtgacggcccgactcttccgtccccggctgatc
atcgcgggaaccagcgcgtacgcccgcctcatcgactacgccaggatgaaaaaggtatgc
tctgacgtaaacgcgtacctgctggcggacatggctcatatcagtggcctggtggcagcc
aaggtgattccctccccgtttgaacatgctgacattgtcaccagcaccacacacaagacc
ctccgtggagtcaggtccgggctgatcttttaccgtaagggggtgcgctccgtggacaag
aagggcaaggaggtgatgtacgacctggaggaccgcatcaacttctccgtcttcccctcg
ctgcagggcggcccgcacaaccacaccatcgcaggggtggccgtggcactcaggcaggct
gccatgcccatgtttaaggagtactctgcccaggtcctgcgcaacgccaaggccatgtcc
aacgccctgctgaagaagggctacacactggtgtcaggcggtacagacaatcacctggtt
ctggttgacctgaggccaaaggggatggatggcgcccgggcagagagggtgctggagctg
gtgtccatcactgccaacaagaacacctgccctggggacaagagtgccctcacccccggg
gggctaagactgggagccccggctctgacgtcccggcacttcaaggaagcggactttgag
aaggtggtggacttcatggatgagggctttcagatcgcaatcgatgtgaagaagaagaca
gccaagctccaggacttcaagacattcctgctgcaggaccccgagaccaaggccaggatt
gcagacctacggcagagggtggagcagttcgcccgctccttccccatgcctgggttcgag
agtcactaa
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