Lepisosteus oculatus (spotted gar): 102685467
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Entry
102685467 CDS
T07349
Symbol
usp13
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13 isoform X3
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
loc
Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
loc01002
]
102685467 (usp13)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
loc04121
]
102685467 (usp13)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
loc04147
]
102685467 (usp13)
Enzymes [BR:
loc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
102685467 (usp13)
Peptidases and inhibitors [BR:
loc01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
102685467 (usp13)
Ubiquitin system [BR:
loc04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
102685467 (usp13)
Exosome [BR:
loc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
102685467 (usp13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UBA_7
UBA
zf-UBP_var
zf-UBP
UCH_1
UBA_9
Motif
Other DBs
NCBI-GeneID:
102685467
NCBI-ProteinID:
XP_006637472
Ensembl:
ENSLOCG00000001321
LinkDB
All DBs
Position
LG14:1613546..1646131
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AA seq
854 aa
AA seq
DB search
MAADLGELLVPYMPTIRVPRTGDRVFKSECAFSYDSPESEGGLYVCMNTFLGFGREHVER
HYRKTGQCVYMHLKRTIKEKDPGASGGAVPRRQNGKVFLEDVDLSCDFNGDDYEYEDEAK
LVIFPDHFEIPLPNIEELPALVTIACDAVLSSPSPYRKQEPDSWEDEIQVSRHARNLKQL
DNSVRIPPSGWKCARCELRENLWLNLTDGAVHCGRWFFDGSGGNGHALEHYRETHYPLAV
KLGTLTPDGGDVYSFDEEEAVLDPYLAEHLAHFGIDMLQMQKTENGLPDSKAKPRISEWE
VIQESGLKLKPVYGSGYTGIKNLGSSCYLSTTMQVLFSIPEFQRAFVGNIQRIFDYSPLD
PTQDFSTQMAKLGHGLLSGQYSKPPVKSELIEQPQQRGISPRMFKALVSRGHVEFSSSRQ
QDAQEFFLHVINQVERNSEGSENPSDVFRFLVEERVQCCQTRKVRYTQRVDYLMQLPAPL
EAATNKEELISYESRRQEAEEGRRPPPERVRARIPFSACLQAFTEPENVADFWSSALQAK
SAGIKTSRFASFPLYLVVQIKKFTFGVDWVPKKVDLSIDVPDLLDISHLRAAGLRPGEEE
LPDLAPPIVIPDDPRDHSMSHLMDSPEIDESSVMQLAEMGFPLEACRKAVYYTGNMGPEM
AFNWIIAHMEEPEGNGNRNAGSNPQQDFAEPLALPSFGDPGTGGSSLTSGMDSQPPEESI
AILTSMGFSRRQTVQALGATNNNLERALDWIFTHPESEEESEPVSGVADAEGNSAAEASS
GAEPAGPRVRDGPGRYELFAFISHMGTSTMCGHYVCHIKKEGRWVIYNDHKVSLSERPPK
DLGYIYFYQRLASS
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagacttgggagagctgctggtcccgtacatgcccaccatccgagtccccagg
accggggaccgggttttcaagagcgagtgcgccttctcctacgactccccagagtctgaa
ggaggcctgtacgtgtgcatgaacacgtttctgggctttggcagggaacacgtcgagagg
cattatcgcaaaaccgggcagtgtgtgtacatgcatctgaagcgcacgatcaaagagaaa
gacccaggagcctcgggaggcgcggtgccacggagacagaacgggaaagtgtttttagag
gacgtagacctcagctgcgattttaacggagacgattacgaatacgaggacgaggccaaa
cttgtcatattcccagaccacttcgagatccctttgcccaatattgaggagctgccagcg
ctggtgacgatagcctgtgacgctgtgctcagctccccgtcgccgtacaggaaacaggaa
ccggactcctgggaggacgagatccaggtgtccaggcacgccaggaacctcaagcagctg
gacaacagcgtccggatcccccccagcggctggaagtgcgccaggtgtgagctgcgcgag
aacctgtggctcaacctcacggatggagcggtgcactgtgggaggtggttcttcgatggc
agcgggggcaacggccacgcgctggagcactaccgcgaaacccactacccgctggccgtc
aagctgggcaccctcacccccgacggcggagatgtgtattcattcgatgaggaggaggct
gtactggacccatacttagcagaacatttagctcactttggaatagacatgcttcagatg
caaaagacggagaacggcctcccggacagcaaggcgaaaccgcggatcagcgagtgggaa
gtgatccaggagtcgggcttgaagctgaagcccgtgtatgggtctggctacacgggcatc
aagaacttgggcagcagctgctacctgagcaccaccatgcaggtcctcttcagcatccca
gagttccagagggcgtttgtgggaaacattcagaggatatttgactactcgcccctggat
cccacgcaggatttcagcacacagatggccaagctgggacacggtctcctgtcaggccag
tactccaagcctccagtgaaatctgagctgattgaacagccccagcagcgagggatctcc
cccaggatgttcaaagccctggtcagcaggggccacgtggagttctcctccagcaggcag
caggacgcccaggagttcttcctgcacgtgatcaaccaagtggagaggaacagcgagggc
tcggagaatcccagcgacgtcttccggttcctggtggaggagagggtccagtgctgccag
acccgcaaggtccgctacacgcagagggtggactacctcatgcagctgcctgcccccctg
gaggccgccaccaacaaggaggagctgatcagctacgagtccaggcggcaggaggcggag
gagggccggaggccccccccagagcgggtgcgagccaggatccccttcagcgcctgtctg
caggccttcacggagccagagaacgtcgccgacttctggagctcagccctgcaggccaag
tccgcgggaatcaagacgtcccgcttcgcgtccttccccctgtacctggtcgtacagatt
aagaaattcacttttggggtggactgggtgcctaaaaaagtagacctgtccatcgacgtg
ccggacctgctggacatctcgcacctccgtgccgctggcctgcggccgggggaggaggag
ctgcccgacctggcgccgcccatcgtcattcctgacgaccccagagatcactccatgagc
catctcatggactctccggagatcgacgagtcctcggtgatgcagctggcagagatgggc
ttccctctggaggcctgccggaaagcggtttactacacaggaaacatggggcctgagatg
gccttcaactggatcatagcccacatggaagagcctgaaggcaacggtaacagaaacgcc
ggaagtaatccgcagcaggatttcgcagagcccttggccctgccctcgttcggggaccct
gggaccggggggtcgagcctgacctccgggatggacagccagcccccggaggagagcatc
gccatcctgacctccatgggcttctcccggcgccagacggtccaggcactgggggccacg
aacaacaacctggagagagcgctggactggatcttcacccaccccgagagcgaggaggag
agcgagcctgtctcgggcgtcgcggacgcggagggcaacagcgccgcagaagcctcctcc
ggcgcagagcccgcgggcccgcgggtccgagacgggcctggacgctacgagctctttgcc
tttatcagccacatgggaacatccacgatgtgcggccattatgtttgccacattaaaaag
gagggcagatgggtgatctacaatgaccacaaagtgagtctttccgaaaggcctcctaag
gacttgggctacatctacttttaccagcggctggccagcagctag
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