Lepisosteus oculatus (spotted gar): 102685482
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Entry
102685482 CDS
T07349
Symbol
rpgrip1l
Name
(RefSeq) protein fantom
KO
K16550
protein fantom
Organism
loc
Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
loc01009
]
102685482 (rpgrip1l)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
loc03037
]
102685482 (rpgrip1l)
Protein phosphatases and associated proteins [BR:
loc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
102685482 (rpgrip1l)
Cilium and associated proteins [BR:
loc03037
]
Primary cilia and associated proteins
MKS complex
102685482 (rpgrip1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2-C2_1
RPGR1_C
C2
Rad50_zn_hook
Motif
Other DBs
NCBI-GeneID:
102685482
NCBI-ProteinID:
XP_015224156
Ensembl:
ENSLOCG00000007156
UniProt:
W5MJV6
LinkDB
All DBs
Position
LG23:14427415..14490407
Genome browser
AA seq
1274 aa
AA seq
DB search
MSAIADETAGDLPVKDISLNLTGVGGLQDVSVTQNSRARQAVSRISREELEDRFLRLHDE
NILLKQHANKQEDKIRRMATKLIRLVKDRKRAEQQDGRPRPLGRDVEMEELIEELQEKVQ
ELEKQNEGLRHRLIAAKQQLQVQGRRQSPYGHVQSRINSGLRKLRDDAQPSRGLRSMEPD
VSARATQTIAPRYGHSLLDDARAEIRNLENVIESQQGQMEEMDRVTEMLREQLKWKEKEY
EESLLQLREHQATGQRSTIKDNVEMIKLQKQLAEKGNAFTALEGRFFQLQESQRTLKASH
DALMVKVDELNAQLKDERLKGLSLEKQLQASSLAQRRSEELQDRIGDLEKERDLLKENYD
KLFNSAFNVTHEQQWKTKEQQLKLQIAQLEVALKSDLADKNEILDRIKREREQNESLSLE
NRELQLRFLEQKQQLDEIKDRMKFFTKESDIDVAELSEALMLIKVRKSQKSRELEFLEKV
EEDVNKDLERSMRELQATHAETVQELEKTRNMLIMQHKINKDYQTEVEAVTRKMEDIKQE
YEMKHERLAQLLDMRAARIRKLEAQLKDIAYGTKQHVFRPEITDEDQADEFDETVHLARG
ENLFEIHIGKVRFSPEALEALGDQEPTTFCTYAFYDFELQATPVVRGSQPAYDFTSQYVV
RVDDFFLQYLQTGAVTLEVQLASGMDYQTAAAGQLQLREILEKNGKVFGSSALVGVRGDI
SAYGTVEYWLRLRLPMDQAIRLYKERIKALGYLSSNQRDVHQTQQALAAPPLLSPPLAEG
NLNELHITVRRCNNLKARQPAVQPSPYVIYKFFDFTDHDTPIIPSSNDPHFDDHMSFSVP
MNADLDRYLKANSLSLYVFDDEDTQGHLYLGKAKVPLMSLAHDKGIIGTFELLDHAGQTS
GTIDVTLKWRFSYLPPSGCSMTVEQARFVPKEVPEKLTAEEENTGSPSLALSPTSVREVP
QPKPRRQVPLKDKTCSKKVSFVDVRAPESPVQESSPHPDHENEILEEKTQGLTPLQPTEA
RTEPEVGEEQPLAAQETGEEEEEEESRLSEGQLATHSSLSSEEDSSISEELPQQEEGEDA
PAADLNESILSDSDDCIVPAQASQGRKQPSSRIRVEIISLSLNPDSSVAMDDSIRKLFVE
YRLLNQSAEETPLSLPKPGRGQSIHFNYSTMIHVDIENNKPRREILRSVLRGTEPALESI
KFTVVSDPPEEEQDLECEDVGVAFLRIRDILEHRRDFIDWSLDIVDVQEGSVVIGSLKVT
LEALDALQSIMEEP
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctatagctgatgaaacagcaggagacctgcctgtgaaagatataagcctgaac
ctcactggagtcgggggattgcaagatgtgtcggtgacgcagaattcccgagcacgtcag
gctgtgtcacgcattagccgagaggagctggaggatcgcttcctgcgtctccacgatgag
aacatcctgctcaaacagcatgccaacaagcaagaggacaagatccgcaggatggccacc
aagctgatccgactggtgaaggacaggaagcgggccgagcagcaggacgggaggccgcgg
ccgctgggccgggacgtggagatggaagagctgatcgaggagctgcaggagaaggtgcag
gagctggagaagcagaacgaggggctgaggcatcgactgatcgcggccaagcagcagctg
caggttcagggccgcaggcagtccccttacggacacgtccagtcccgcatcaacagtggc
ctgcgcaagcttcgggacgacgctcagcccagcagagggctcagaagcatggagcctgat
gttagtgcaagggcaacccagaccattgccccccgttatggacacagcctgctggatgat
gcccgagctgagatccgcaacctggagaatgtgatcgagtcacagcaagggcagatggag
gagatggacagggtgacagagatgctgagggaacagttgaagtggaaagagaaggagtat
gaggagtccctgctgcagctccgagagcatcaggccactggccagaggtcaaccataaag
gacaatgtggagatgatcaaactgcagaagcagcttgccgagaaaggcaatgcttttact
gctttggaggggagattcttccagctgcaggagagccagaggactctgaaggccagccat
gatgcgctgatggtgaaggtggatgagctcaatgcacagctgaaggatgagcgtctgaaa
ggcctgagtcttgagaagcaactgcaggccagctctctggcacagaggagatcagaagag
ctgcaagaccggatcggtgatctggagaaagagagagatctgctcaaggaaaactacgat
aaacttttcaacagtgcgttcaatgtgacccacgaacagcaatggaagacaaaagaacag
cagctgaaactgcagattgcccaactagaggtggcactgaaatcagatcttgctgacaag
aatgagatcctggacagaatcaaacgtgaaagagaacagaacgagagcttgtcactagag
aatagagagttgcagcttcgttttctggagcaaaagcagcagctggatgaaattaaagat
cgcatgaagtttttcaccaaggagagtgatattgatgtggctgaactcagtgaggcattg
atgcttataaaggttcggaaaagccagaagagcagagagcttgagtttctggagaaagtt
gaggaagatgtgaacaaggatttggagcgttccatgagggaactccaggcaacacatgca
gagacagtgcaagagctggaaaagacaaggaacatgctcatcatgcagcacaagattaat
aaagactaccagactgaggttgaagctgtgacccgcaagatggaagatattaagcaagaa
tatgagatgaaacatgagcgcttagcccagctgctcgacatgagagctgcccgaatccgg
aaactagaagcccaactaaaagacattgcttacggcaccaagcagcacgtattcaggccc
gagattacagatgaagaccaggcagacgagtttgacgaaacggttcacctggcgagggga
gagaacctgtttgagatccatatcggcaaagtgcgcttctcccctgaggctctggaggca
ctgggggaccaggagcccaccacgttctgtacgtacgccttttatgacttcgagctgcag
gccaccccagtggtgaggggctcccagccagcctatgacttcacttcccaatacgtggtg
cgtgtggacgacttcttcctgcagtacctccagaccggcgcggtcacactggaggtgcag
cttgccagcggtatggattaccagactgctgcggccggccagctgcagctgcgcgagatc
ctggagaagaatggcaaagtctttggctcttctgctctggtgggtgtcagaggagatata
agtgcatatggcacagtggagtactggctgcggctccgacttcctatggaccaggctatc
cgcttgtacaaagagcgcataaaggctcttggctacctgagctccaatcagagagacgta
catcagacacaacaggctctggcagcccctcctctcctctccccgccactggctgaaggc
aatctgaacgagctccatatcacagtgcggcgctgtaataacctgaaggctcggcagccc
gctgtgcagcccagcccatacgtcatctacaagttctttgacttcaccgaccacgacaca
cccatcattcccagcagtaatgacccccacttcgatgaccacatgagtttctctgtgcca
atgaacgctgacttggaccgctatctgaaagccaactcactctccctctacgtgtttgat
gatgaggacacccagggacatctgtatttgggaaaagccaaagtgcctcttatgtctcta
gctcacgataaaggcatcattgggacgtttgagctgctggaccatgctggccagacaagt
gggaccattgacgtgactttgaaatggcggttctcttacctcccaccaagcggctgctcc
atgacagtagaacaggccaggtttgtgcccaaggaggttccagagaagttaactgccgag
gaggaaaatacagggtcgccttctttagccctttcacccacgtccgtcagagaggttcct
cagccaaagcccaggcgtcaggtacctttaaaggacaaaacatgtagcaagaaagtgtca
ttcgttgacgttagagcacctgaaagtccagttcaggaaagcagtccacaccctgaccat
gaaaatgaaatattagaagaaaaaacccagggtttgactccactacaacccacagaggcc
aggacagagccggaggtcggcgaggaacagccgctggccgcacaggaaacaggcgaggaa
gaggaggaggaggagtcgcggctctcggaggggcagctggccacacacagctccctgtcc
tctgaggaagactccagcatctcggaggagctccctcagcaggaagaaggggaggatgca
ccggctgctgatctcaatgaatcaatactctcggacagtgatgactgcattgttccagcc
caggcatctcaaggcagaaagcagccatccagtcgcatccgtgttgagatcatctctctc
agcctgaatccggactcgtctgtggccatggatgacagcatccgaaagctgtttgtggag
tacaggctgctaaaccagtctgcggaggagacaccactgtcgctgcccaaaccaggcaga
ggccagagtattcacttcaactacagcaccatgatccatgtggatatcgaaaataacaag
ccaagacgtgagatcctgaggtcggtgctccggggaactgagccagcactggagagtata
aagttcacagtagtgagcgacccccctgaggaagagcaggatttggagtgcgaagatgtg
ggtgtggctttcctgaggatccgggacatcctggagcacaggcgagacttcatcgactgg
agcctggacattgtggacgtgcaggaaggcagcgtggtgatcgggagtctgaaggtgaca
ctggaagctctggatgccctgcagtccatcatggaggagccctga
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integrated database retrieval system
