Lepisosteus oculatus (spotted gar): 102685484
Help
Entry
102685484 CDS
T07349
Symbol
crocc
Name
(RefSeq) rootletin
KO
K16469
rootletin
Organism
loc
Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
loc03037
]
102685484 (crocc)
Cilium and associated proteins [BR:
loc03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
102685484 (crocc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rootletin
Crescentin
Tropomyosin
CLZ
Motif
Other DBs
NCBI-GeneID:
102685484
NCBI-ProteinID:
XP_015192431
LinkDB
All DBs
Position
LG25:complement(14086293..14110660)
Genome browser
AA seq
1163 aa
AA seq
DB search
MSCGQNPAGEPKLEAVIQRLEESVLSSGDEKYLTVRGEAQDSPPTRLPARIREIVTKNLS
EPRPSAMSSVLSLQDENRLLQTELARVEDLLAHSRAERDELAIKYSAISERLEACLRARG
LAAVTNADLDQAISWQAGTEGEEPGSRGHALEQALRVETGERERDSLESRSLAQQNTELR
RRLEEEQAAYKRKLTAYQEGQQRQAQLVQKLQAKVLQYKKKCGELEQSLLEKSSELEQHR
LTEGLEISSGRLRPEEEEPSNDLENALIRLEEEQQRSASLARVSVDLSEMRNELARVSRG
ALSSCVSLGASVRASEGSSALVQERQAAQLAQLEGQLRDRVRDMLQLQARCDAERAELSA
RLAEAQGELERLRAQSEEKERAAASLTQRLEALEHSSSAEQELQTLRAQTEALQFTLRDI
AQTVLADKDPSVSSEAEGENLGGGRGAVVRGRRGGEEQEECGCQLLCAAQLEEARGALSL
SEQGRDALRREQLEAERRLRESRDEGEGLRREGAELRRSLADLAKERDTLSTSNTQLRDS
LRAAESDRISVKRQCEEKEQKLAVMEESRAASEREAGELRAGLREVERSRLEARRELQEL
RRQVRQTDRGLQLHRRPASSLGHRSEEASGLEQQASSLSSADIWGCWGLVLCWLIWTRWS
GTERLQSMLTDCVLQDEVQTQLSSVTRQLGEMEAERDTTQSRLTQLERALSQSEEGKRGA
DGRLSSAQAALQLQEEAVRRGEKERRALSERVGQLERSMQSAEAERRLTQEQMSKLKAGE
ARLEAERRRLREALEAAEARGTKLELARRSLEGELQRLRLSLGDRESDIQSSQDRLEALQ
KQVSEGEMRAGALQREVERLNLALAKAQESEAALKERAASLAAGLAEATAAHSATQERLA
ALQKALASSEQDRRLLQERVDSARAAAAEGKRSVTALAERVQGLQSELSDSELRRGELEA
ELSSAQEALRQRVQALEEAQRSVERLQSERALAAERVRSLQRALSQLESEKREAERAAVR
LEKDKNALRSTLDKVERQKMQSEEGSLRLSAEKGRLDRSLSTAELELQDAHRQITLLQAQ
LAEVEQSHGGQEAARQREEAQREAERLRVAQREAERTLEARERAHRQRVRGLEEQVSTLK
EQLQQEIRRRQPLFSSTSVLSGN
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgagctgcggccagaacccagccggcgagcccaaactggaggcggttatacagagactg
gaggagagcgtcctgtcttctggagacgagaagtatttgacagtgcgtggtgaagcccaa
gactccccacccacccgcctgcctgcacgtatcagagagattgtgactaaaaacctgagc
gagcccaggccgagcgccatgtcctccgtgctctctctccaggacgagaaccggctcttg
cagacagagctcgccagagtcgaggacctgctggctcacagccgtgcggagcgcgatgag
ttggccatcaagtacagcgccatcagtgagcggctggaggcttgtctgcgtgcccgaggc
ctggccgcagtgaccaatgctgacctggatcaggcgatcagctggcaggctggcactgag
ggggaggagccagggtcgcgggggcatgcgctggagcaggccctgcgcgtggagacgggc
gagagggagcgcgattcgctggagtcgcgcagcctggcgcagcagaacacggagctgcgc
aggaggctggaggaggagcaggccgcttacaagcgcaagctgaccgcctaccaggagggg
cagcagaggcaggcgcagctggtgcagaagctgcaggccaaggtgctgcagtataagaag
aagtgtggagagctggagcagagcctgctggaaaaatcctccgagctggagcagcacaga
ctgaccgaggggctcgagatctctagcggcaggctccgccccgaggaggaggagccaagc
aacgacctggagaatgccctcatccgattggaagaggagcagcaaaggagtgccagtctg
gcccgggtcagcgtagacctctcggagatgcggaacgagctggcgcgggtgtcgcgcggt
gcgctgtcgtcgtgcgtcagcctgggcgccagcgtgcgagccagcgagggcagctcggcc
ctggtgcaggagcggcaggccgcgcagctggcgcagctggaggggcagctgcgggacagg
gtgcgggacatgctgcagctgcaggcccggtgcgacgcagagagggcggagctcagcgcc
aggctggcggaggcccagggcgagctggagaggctccgggctcagagcgaggagaaggag
cgagccgctgcctccctgactcagaggctggaggcgctggagcacagcagcagtgcagag
caggagctgcagactctgagagcacagactgaggctctgcagttcacgctgagggacatc
gcacagactgtgctggcagacaaagaccctagcgtatcgtctgaggcggagggggaaaat
ttgggaggggggagaggagctgtggttcgagggcggagaggaggggaggagcaggaggag
tgtgggtgtcagctgctctgtgccgcgcagctggaggaggcgcggggggcgctgtctctg
agcgagcagggccgcgacgcgctgcggcgggagcagctggaggcggagcgccggctgcgc
gagtcccgcgacgagggggaggggctgcgccgcgagggggcggagctgcggcgctcgctg
gccgacctggcgaaggagagggacaccctgagcacctccaacacccagctgagggactcg
ctgagagccgccgagagcgacaggatcagtgtgaagaggcagtgtgaggagaaggagcag
aagctggccgtgatggaggagagccgcgcagcgtctgagagggaggccggcgagctgagg
gccggcctgagggaggtggagaggtcccggctggaggcacgcagggagctgcaggagctc
cgcagacaggtgaggcagacagacagagggctccagctgcacaggcgcccggccagcagc
ctgggacacaggagcgaggaggcctctgggctggagcagcaggccagctccttgtcctct
gcagacatctggggctgctgggggctcgtgctgtgctggttgatctggacgaggtggagt
gggacagagagactccagtccatgctgacagactgtgttttgcaggacgaggtgcagact
cagctgagctcagtcaccaggcagctgggagagatggaggcagagagagacacgacgcag
agccgcctgacacagctggagagagcactgagccagagcgaggaggggaagcggggggca
gacgggaggctgagctcggctcaggcggcgctgcagctgcaggaggaggcggtgcggcga
ggggagaaggagaggagagcgctgtcggagcgcgtgggccagctggagaggagcatgcag
agtgcagaggccgagcggcgcctcacacaggagcagatgagtaagctgaaggctggagag
gcgaggctggaggcagagagacggaggctgcgtgaggccctggaggcagcagaggcccgg
ggcaccaagctggagctggcgaggcgcagcctggagggggagctgcagaggctgaggctg
agcctgggggacagagagagcgacattcagagcagccaggaccggctggaggcgctgcag
aagcaggtgtcggagggcgagatgcgcgccggcgctctgcagagggaggtggagaggctg
aacctggcgctggccaaggcgcaggagagcgaggcggcgctgaaggagagggcagccagc
ctggcagccggcctggccgaggccaccgccgcccacagcgccacccaggagcgcctggcc
gccctgcagaaagcactggcctccagcgagcaggacaggcgcctcctacaggagcgcgtg
gacagcgcgcgggccgcagcggcggaggggaagcgcagtgtgacggccctcgctgagcgc
gtgcagggcctgcagagcgagctgtcggacagcgagctgaggaggggggagctggaggca
gagctgtcgtcggcacaggaggctctgcgccagcgtgtccaggccctggaggaggcccag
cgcagcgtggagcgcctccagtcggagcgcgcactggccgccgagcgcgtgcgcagcctg
cagagggcgctgtcccagctggagagcgagaagagggaggcggagagggcggctgtgcgg
ctggagaaggacaagaacgccctgaggagcacgctggacaaggtggagcgtcagaagatg
cagtcggaggaggggagtctgcgcctctctgcggagaagggcaggcttgaccgctctctg
tccacggcagaactggagctacaggacgctcaccggcagatcaccctgctacaggcccag
ctggcggaggtggagcagagccacggcggccaggaggcagcgaggcagcgggaggaggcc
cagcgcgaggcagagaggctgagggtggcgcagagggaggcagagcgcaccctggaggcc
agagagagggcacaccgccagagggtccggggcctggaggagcaggtgtccaccctgaag
gagcagctccagcaggagatccgacggcgccaacccctcttctccagcacctcggtcctg
tcgggaaactga
DBGET
integrated database retrieval system