Lepisosteus oculatus (spotted gar): 102685629
Help
Entry
102685629 CDS
T07349
Symbol
rffl
Name
(RefSeq) E3 ubiquitin-protein ligase rififylin isoform X1
KO
K20804
E3 ubiquitin-protein ligase RNF34 [EC:
2.3.2.31
]
Organism
loc
Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
loc04121
]
102685629 (rffl)
Enzymes [BR:
loc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
102685629 (rffl)
Ubiquitin system [BR:
loc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
102685629 (rffl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF34L-like_3rd
SAP_RNF34_RFFL
FYVE_CARP1-2
zf-C3HC4_3
ARMET_C
zf-RING_5
Prok-RING_4
HeH
FYVE
FYVE_2
SDE2_2C
MUG2_C
Motif
Other DBs
NCBI-GeneID:
102685629
NCBI-ProteinID:
XP_015223001
Ensembl:
ENSLOCG00000000911
UniProt:
W5LY12
LinkDB
All DBs
Position
LG22:118086..134656
Genome browser
AA seq
344 aa
AA seq
DB search
MWASCCNWMCLDTTTVEETSSTRRQAYTNSGYSSYPSPPAPEQTCKACGGRFDTSSRKHV
CTDCKKSFCSRCSEQPEFGLRVCHTCRRFHGILSERAELMKLKVKDLRDYLHLHEVSTQM
CREKEELVELVMGRQTPSSSSSSHGDAQSHTPQPGPTPGPASPSTSQGPAPGCLPRGDQQ
IPVPSCPGETPASETEPAPQEEQESQSSDAEETPAPGRRASLSDLTNAEDIEALSVRQLK
EILARNFVDYKGCCEKWELMERVTRLYHDQQELQNLVSNNGNSTDPSGPPGMEENLCKIC
MDSPIDCVLLECGHMVTCTKCGKLMSECPICRQYVVRAVHVFRS
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgtgggcctcctgctgtaactggatgtgtctggatactactacagtggaggaaaccagc
agcacgaggcgccaggcctacactaactcggggtacagcagttacccctccccacccgcc
ccggagcaaacctgcaaggcctgcggggggcgcttcgacacctcatccaggaagcatgtg
tgcacggactgcaagaagagcttctgcagcaggtgctcggagcagccggagttcggcctg
cgggtgtgtcacacgtgccgccgcttccacggcattctctcggagagggcggagctgatg
aagctgaaggtgaaggacctgcgggactacctgcacctgcacgaggtctccacacagatg
tgccgagagaaggaggagctggtggagctggtcatgggccggcagactcccagcagcagc
agcagcagccatggagacgcccaatcccacacaccccagcccggccccactcccggtcca
gcctccccctccacatcccaaggtccagctcctggctgcctcccgcgcggcgaccagcag
atcccggtgccttcctgtccaggcgagacaccagccagtgagaccgagccggcaccccag
gaggagcaggagtcacagtcctcagacgcggaagagactccggccccaggccgcagggcc
tccctgtccgacttgaccaacgctgaagacatcgaggccttgagtgtccggcagctgaag
gagatcctggcccgcaactttgttgactacaaaggctgttgtgagaagtgggagctgatg
gagagagtcacccgactctaccatgatcagcaagagctgcagaatctggtttcaaacaat
ggaaactctactgatccttctggcccaccgggcatggaggagaacctgtgtaagatctgc
atggactcccccattgactgcgtgctgctggagtgcggccacatggtcacctgtaccaag
tgtggcaagctcatgagcgagtgtcccatctgcaggcagtacgtggtgagagccgtgcat
gtgttcagatcctga
DBGET
integrated database retrieval system
