Lepisosteus oculatus (spotted gar): 102685864
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Entry
102685864 CDS
T07349
Symbol
caprin2
Name
(RefSeq) caprin-2
KO
K18744
caprin-2
Organism
loc
Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
loc03019
]
102685864 (caprin2)
Messenger RNA biogenesis [BR:
loc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
102685864 (caprin2)
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Caprin-1_dimer
C1q
Caprin-1_C
Motif
Other DBs
NCBI-GeneID:
102685864
NCBI-ProteinID:
XP_015207359
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Position
LG8:1049251..1063842
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AA seq
856 aa
AA seq
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MACSETVLTMVQLSPSPVLDLAPMSEHSEVTAERQGSPRSPTAEAPPVLSSLQLALASSA
PTYQGYDTYIENGLICLKHKIRNIEKKKLKLEDYKQRLKAGEALNQDQLDAVEKYDEVVH
NLAFARELQKTFSSLSQDLLKAQRKAVRREQVQKTEVEKKRLCTVLQVHYILQSLQQEHV
RKDFRSGLNGAPFLSARELERLLGFSERVGCKRNESMSVEDQMEQAAIVYGDLLEGADKP
VAGTTYKHLKEQLARLLDCGYFDHIPVPHSESLEEAVAEVVKKPLAPKRPAAGVPEPSVP
LPKCEVPAREFLNRRYLPETDFRAQEQEGQPVPSWKAEFLALKQQEPPDSWDMEYTEKPA
SPPQSALKPWRAAPAPVPAPAPAPMPAPAPTPVPKEQVEVKPPPAAAAAEPKQRRERKSR
PEQEMKVAPKSDPSPVAVFTSPSPLPADPELRKQKLQDLMEEIQGSFSFMQDSVLEGEGS
PGGGTSRLKHSALGTSTPLVQREPKKCPADLLPKALKPAPVPAAPVPPKSSLTNGECSLI
DSGVDFPTEEPDQDKMQLSNADGYVPAPLYPAGSGVAESSVDKASDPSPVGDFETCGSGG
FSVVILPFSTSGGFESYKNGMPSPGGNFIQPSYPARECTPILYGARESGFQQNYKRGGLT
GQRASSRATWSDSSQVSSPERDNETFASVDSGQGDSRCITPIDVPVSAPGATLMPVHVYP
LPQQMRVAFSAARTSNFAPGTLDQPIVFDLLLNNLGETFDMQLGRFSCPVNGTYVFIFHI
LKLAVNVPLYVNLMRNEEVMVSAYANDGAPDHETASNHAVLQLYQGDQIWLRLHRGAIYG
SSWKYSTFSGYLLYQD
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atggcctgctctgaaaccgtgttgacgatggtgcagctgtccccctcccctgtcctggac
ctcgcgccgatgtcggagcactccgaggtgacggcggagaggcaggggagccccaggagc
cccaccgcggaggctccccctgtgctgagctcgctgcagctggccctggcgtcctccgcg
ccgacgtaccagggctacgacacctacatcgagaacgggctcatctgcctgaagcacaag
atccgcaacatcgagaagaagaagctgaagctggaagactacaagcaacgtctgaaggca
ggagaggccctcaaccaggaccagctggatgctgtggagaagtatgatgaagttgttcat
aacttggcatttgcgagagaactgcagaagaccttcagctcccttagccaagatctgctg
aaggcgcagaggaaggccgtgcgccgtgagcaggtgcagaagacggaggtggagaagaag
cggctgtgcactgtcctccaggtgcactacatcctgcagagcctgcagcaggagcacgtg
aggaaggacttccgcagcggcctgaacggggcgcccttcctgtccgcccgcgagctcgag
cgcctgctgggcttctcggagcgggtgggctgcaagcgcaacgagagcatgagcgtggaa
gaccagatggagcaggcagccatcgtgtacggggacctgttggagggagcggacaagccc
gtggccggcaccacatacaagcacctcaaggagcagctggcgaggctgttggactgcggc
tacttcgatcacatccctgtccctcacagcgagagcctggaggaagcggtggcagaagtg
gtgaagaagcccctggcgccgaagaggcccgccgctggcgtcccagaaccctccgtgcca
ctaccaaagtgcgaagttcccgcgagggagtttcttaacagacgctacttgcctgaaacg
gacttccgcgcacaagaacaggaaggccagccagtgccctcctggaaagcggagttcctg
gctctgaagcagcaggagcctccagactcctgggatatggagtacacggagaagccggcc
tctcctccgcagtccgccctgaaaccctggagagcagccccggcacctgtccctgcccct
gcccctgcgcccatgcctgcccccgcccctacccctgtgcccaaagagcaggtggaggtg
aagcccccccctgctgctgctgctgcggagcccaagcagagacgagaaaggaagtccaga
cctgagcaggaaatgaaagtggcacccaagtccgacccctcgccggttgcggtcttcacc
tccccctcgcccctcccggccgacccggagctgcggaaacagaagctgcaggatctgatg
gaggagatccagggctcgttcagcttcatgcaggattctgttctagagggtgagggatct
ccaggaggcggaacctcccggttaaagcattctgccctgggaacgtctacacccctagtg
caaagagagcccaagaaatgcccagcagacctccttccaaaagccctgaagcctgctcca
gtacctgctgctccggtccctccgaaatcgagcctgaccaacggggagtgctctctgatc
gactcgggagtggacttccccactgaggaaccagaccaagataaaatgcagctttccaat
gcagacggctatgttccagcaccactgtatccggctgggtcaggagttgcagaatccagt
gtggataaagcatcggatccaagtccagtaggtgactttgaaacatgtggctcaggtgga
ttcagtgttgtgattcttcctttctccacttcaggaggatttgaaagttacaaaaacggc
atgccatctcctggagggaacttcattcaaccgtcgtaccccgccagagaatgtacacct
atcctgtatggtgccagggaatcggggttccagcagaactataaacgtggaggcttgact
gggcagcgtgccagctcgagagccacctggagcgactcctcgcaggtgagcagcccggag
cgggacaacgagaccttcgccagcgtggactcgggccagggcgactcgcgctgcatcacg
cccatcgacgtcccggtcagcgccccgggggccacgctcatgcccgtgcacgtctacccc
ctccctcagcagatgcgcgtcgccttctcggccgcccgcacctccaacttcgcccccggc
accctggaccagcccatcgtcttcgacctgctgctcaacaacctcggggagaccttcgac
atgcagctggggcgcttctcctgcccggtcaacggcacctacgtcttcatcttccacatc
ctgaagctggccgtcaacgtgcccctgtacgtcaacctgatgaggaacgaggaggtgatg
gtgtcggcctacgccaacgacggcgcgcccgaccacgagacggccagcaaccacgccgtg
ctgcagctgtaccagggggaccagatctggctgcggctgcaccgcggcgccatctatggc
agcagctggaagtactccaccttctcgggttacctcctgtaccaggactga
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