Lepisosteus oculatus (spotted gar): 102685957
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Entry
102685957 CDS
T07349
Symbol
hnrnpa3
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A3 isoform X1
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102685957 (hnrnpa3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
loc03019
]
102685957 (hnrnpa3)
03041 Spliceosome [BR:
loc03041
]
102685957 (hnrnpa3)
Messenger RNA biogenesis [BR:
loc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
102685957 (hnrnpa3)
mRNA cycle factors
Common to processing body (P body) and stress granule
102685957 (hnrnpa3)
Spliceosome [BR:
loc03041
]
Common components
Common spliceosomal components
hnRNP proteins
102685957 (hnrnpa3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
PHM7_cyt
Motif
Other DBs
NCBI-GeneID:
102685957
NCBI-ProteinID:
XP_015214505
Ensembl:
ENSLOCG00000006986
LinkDB
All DBs
Position
LG12:complement(15354323..15363551)
Genome browser
AA seq
372 aa
AA seq
DB search
MNMHHVEIGTSFFRSEARRKGVHCKMESHDTKEPEQLRKLFIGGLSFETTDESLRAHFEQ
WGKLTDCVVMRDPANKRSRGFGFVTYSCVQEVDAAMSARPHKVDGRVVEPKRAVSREDSS
KPGAHLTVKKIFVGGIKEDTEEYHLREYFEKYGKIESIEVMEERQTGKKRGFCFVTFDDH
DTVDKIVAQKYHTINSHNCEVRKALSKQEMQAAANQRSRGGGGSGNFMGRGGNFGGGNFG
RGGNFSGGYGGGRGGYGGDGGGYNGFGGDGGNYGGGPGYGGGRGGYGGGGPGYGNQGGGF
GGYDNYNDGGNFGGNFGGGGGNYNDFGSYGGHNSNYGPMKGSNFGGRNSGGPYGGGYGSG
GGSGGGYSTRRY
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgaacatgcatcacgtggagatcggcacttccttcttccgttcagaagcgaggagaaaa
ggagttcactgcaaaatggagagccatgacaccaaggagccagagcagctgaggaaactg
ttcattgggggtctgagttttgaaaccacagacgagagcttgagggcacatttcgaacaa
tgggggaagctcacagattgtgtggtcatgcgagatccagcaaacaagcgctcgcgagga
tttggattcgtgacgtactcctgtgtgcaggaggtagatgcagccatgtcagcccgccca
cacaaagttgatggccgtgttgttgagccaaaaagagctgtttccagagaagattcctca
aaacctggtgctcatttaacagtaaagaaaatatttgttggagggataaaagaggataca
gaagagtaccatctgagagagtacttcgaaaaatatggaaaaattgaaagcattgaagta
atggaggaacgccagactggaaagaaaaggggtttttgctttgtaacgtttgatgaccat
gacacagttgataaaattgtggcccaaaaatatcacacaatcaattcacataactgtgaa
gtccgaaaagcactatcaaaacaagaaatgcaggctgctgcaaaccagagaagtcgtggt
ggcggcggctctgggaacttcatgggtagaggtggaaacttcggaggaggcaattttggc
cgtggtggcaacttttctggaggatatggagggggcagaggagggtatggaggtgatgga
ggtggctacaatggatttggtggagatgggggaaactatggaggtggccctgggtatggt
ggagggcgaggtggctacgggggaggtggaccaggatatggtaaccaaggaggaggtttt
ggaggatatgataattacaatgatggaggcaactttggaggaaactttggtggtggtggt
ggaaactacaatgactttggaagttatggtggacacaactctaactatgggcctatgaaa
ggcagcaattttggtggccggaattcaggtggtccctatggtggtggctatggttcagga
ggaggaagtggaggtggatacagtacacggagatattaa
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