Lepisosteus oculatus (spotted gar): 102685971
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Entry
102685971 CDS
T07349
Name
(RefSeq) rab5 GDP/GTP exchange factor-like
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
102685971
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
loc04131
]
102685971
Membrane trafficking [BR:
loc04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
102685971
Protein recycling
Other Rab GTPase associated proteins
102685971
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
Motif
Other DBs
NCBI-GeneID:
102685971
NCBI-ProteinID:
XP_015221752
Ensembl:
ENSLOCG00000008272
UniProt:
W5MNU0
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All DBs
Position
LG20:13999640..14011858
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AA seq
440 aa
AA seq
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MWAEPRGIHVDQSELLCKDGCGYYGNPAWQGCCSKCWRERSRRAQACRQDSSPSPGVEGG
SAITFSKFEEKKSTEKGRRVNTMKRLFWGPSSSPKKPNEPTESQSAALKAFQSLQPGDFT
NFLKLLRKPFSQSLQSRCTAFVNTMEAYHDLPVQKQSDLVQDFYQSIAGHFSSLSEEQTV
QMMEHIEKLIMTRLHKWVFCHDSSDDEQKDLALQRRIRSLSWVTPQMLRVPIKEERLEVN
SDPLLPAITAIIEMDARRAPQDKLACVSKCSQSVFRVLASSSSEPASADDFLSGMILVVL
KANPPRLHSNTQYITRFGLPHSLMAGESGYCFTNLCCAVAFIEKLDGPALNLSAKEFEGY
MQGQRMAPREAETDCEGLRRARKNRQLLAEVASRQEQLAEGAQALQADLARWVQAVQTQV
EEVQGKVPLNFTCTEPPSQS
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgtgggcggaacccaggggaattcacgtggaccagtcggagctgctgtgcaaagatggc
tgcggttactacggcaaccccgcgtggcagggctgctgctccaagtgctggcgagagagg
tctcgcagggcgcaggcctgcaggcaggacagcagccctagccccggtgtggaagggggc
tcagccatcaccttctccaagttcgaggagaagaagagcacagaaaaggggcgacgagtc
aacaccatgaagaggcttttctggggcccttcttcctctccgaagaaacccaacgagccc
acagagagccagtctgctgccctaaaggcgtttcagagcctccagcccggagactttact
aatttcctcaagctgctgcgcaagccgttctcccagagcctgcagtcgcgctgcacggcc
ttcgtcaacaccatggaggcctaccatgatctgccggtacagaaacagtcggatctggtg
caggatttttatcagagtatcgccggacacttcagcagcctctccgaggaacagacggtg
cagatgatggagcacattgaaaagctgatcatgacgcgtctgcacaagtgggtgttctgc
catgacagctctgacgatgagcagaaagacctggccctgcagaggaggatccgatctctc
agctgggtgacccctcagatgcttcgtgttcccattaaagaggagaggttagaggtcaac
agtgaccccctcctgcctgcaatcacagcgataatcgagatggacgcccggcgagcgccg
caggacaagctggcctgcgtctccaagtgcagccagagtgtcttccgggtgctggcctcc
tccagctcggagccggcgagcgccgacgacttcctgtccggcatgatcctggtggtgctg
aaggccaacccgccccggctgcactccaacacgcagtacatcacccgcttcggcctgccc
cacagcctcatggccggggagtccggctactgcttcaccaacctgtgctgcgctgtggcc
ttcatcgagaagctggacggcccggccctgaacctgagcgccaaggagttcgaggggtac
atgcagggccagcgcatggccccgcgggaggcggagacggattgcgaggggcttcggagg
gccaggaagaaccggcagctcctggcggaggtggcgagccggcaggagcagctggcggag
ggggcgcaggccctgcaggcagacctggcgcggtgggtgcaggcggtgcagacgcaggtg
gaggaagtccagggcaaggtccccctgaacttcacatgcacagagcccccgagtcagagc
tag
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