Lepisosteus oculatus (spotted gar): 102686015
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Entry
102686015 CDS
T07349
Symbol
gtf2b
Name
(RefSeq) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
102686015 (gtf2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
loc03021
]
102686015 (gtf2b)
Transcription machinery [BR:
loc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
102686015 (gtf2b)
Prokaryotic type
Archaeal type
TFB
102686015 (gtf2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Cyclin_C
KIF9
RB_B
Sigma70_r4
BRF2-like_C_cyclin_rpt
Motif
Other DBs
NCBI-GeneID:
102686015
NCBI-ProteinID:
XP_006634774
Ensembl:
ENSLOCG00000005057
UniProt:
W5MCI0
LinkDB
All DBs
Position
LG10:7146777..7157100
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AA seq
316 aa
AA seq
DB search
MASTSRGDALPKVQCPNHPDAMLVEDYRAGDMICPECGLVVGDRVIDVGSEWRTFSNDKA
AKDPSRVGDAQNPLLNGGDLTTMISKGTGAASFDEFGNSKYQNRRTMSSSDRAMLNAFKE
ITNMADRINLPRNIIDRTNNLFKQVYEQKSLKGRSNDAIASACLYIACRQEGVPRTFKEI
CAVSRISKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNLGLPKQVQIAATYIARKAV
ELDLVPGRSPISVAAAAIYMASQASAEKKTQKEIGDIAGVADVTIRQSYRLIYPRAADLF
PPDFKFDTPVDKLPQL
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctactagccgtggagatgcccttcccaaggtccagtgccccaaccaccccgat
gccatgctggtggaggactaccgggccggagacatgatctgccccgagtgcggactggtt
gtgggtgacagagttatcgatgtaggatcagaatggaggacgttcagcaatgacaaagct
gccaaagacccgtcgcgagttggagacgcccagaaccctctgctcaatggaggagacctg
accacaatgatcagcaagggcactggggcagcaagcttcgacgagtttggcaactcgaaa
taccagaaccggagaaccatgtccagctcggaccgggccatgctgaatgcgttcaaagaa
atcaccaacatggcagacagaatcaaccttcccaggaacatcatcgaccgaacaaataac
ttatttaagcaagtgtacgagcagaaaagcctgaagggaagaagtaatgatgcaatcgct
tctgcttgcctgtatatcgcctgcagacaagaaggagttcctcgaacatttaaagaaatc
tgcgcggtgtccagaatttccaaaaaagaaatcggccggtgtttcaagctgatcctgaag
gccctggagaccagcgttgatctgatcaccacgggggacttcatgtccaggttctgctcc
aacctggggctgcccaagcaggtgcagatcgccgccacctacatcgcccggaaggctgtg
gagctggacctggtgccgggcaggagccccatctccgtggcagccgcggcgatttacatg
gcctcccaggcctccgcggaaaagaagacccagaaagaaatcggagacatcgcaggagtg
gccgacgtcacgatcaggcagtcctacaggctcatctacccccgcgctgccgacctcttt
ccccccgacttcaagtttgacacccccgtcgacaaactgccccagctgtaa
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