Lepisosteus oculatus (spotted gar): 102686264
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Entry
102686264 CDS
T07349
Symbol
exosc1
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102686264 (exosc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
loc03019
]
102686264 (exosc1)
Messenger RNA biogenesis [BR:
loc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
102686264 (exosc1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
102686264 (exosc1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ECR1_N
EXOSC1
Motif
Other DBs
NCBI-GeneID:
102686264
NCBI-ProteinID:
XP_015201713
Ensembl:
ENSLOCG00000003776
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All DBs
Position
LG5:4495172..4499278
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AA seq
128 aa
AA seq
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MSPKTLCVPGERLCSTEECVPGPGTYLRHGYIFASLAGYVLRKNAGEEVEIYKSFRPGDI
VLAKVISLGDVQSNYLLTTAENELGVVVAHSEAGEQMVPISWCEMQCPRTHAKEFRKVAR
VQPEYLQA
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgtctcctaagacgctgtgtgtgccaggagagaggctgtgcagcacagaggagtgtgtc
ccggggcctggaacgtacttgcgtcatggctacatctttgcctccctcgctggttatgtg
ctgaggaagaacgcgggagaggaggtggagatctacaagagtttccgaccaggagatatc
gttctagccaaagttatctccctaggtgatgtccagtccaactatcttctcaccacagcg
gagaatgagctgggagtggtggtagcacatagtgaagcaggtgagcagatggtgccgatc
agctggtgtgagatgcagtgtccgcggactcatgccaaggagttccggaaggtggcgagg
gtacagccggagtacctccaggcgtga
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integrated database retrieval system