KEGG   Lepisosteus oculatus (spotted gar): 102686278
Entry
102686278         CDS       T07349                                 
Symbol
ccnt2
Name
(RefSeq) cyclin-T2 isoform X1
  KO
K15188  cyclin T
Organism
loc  Lepisosteus oculatus (spotted gar)
Pathway
loc03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:loc00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    102686278 (ccnt2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:loc03021]
    102686278 (ccnt2)
Transcription machinery [BR:loc03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     102686278 (ccnt2)
    Brd4/P-TEFb complex
     102686278 (ccnt2)
    7SK RNP complex
     102686278 (ccnt2)
SSDB
Motif
Pfam: CycT2-like_C Cyclin_N
Other DBs
NCBI-GeneID: 102686278
NCBI-ProteinID: XP_015213996
Ensembl: ENSLOCG00000001764
LinkDB
Position
LG12:complement(3140191..3150077)
AA seq 740 aa
MAACRGSTSRWFFTREQLEATPSRRCGVEPDKELSYRQQAANLIQDMGQRLNVSQLTINT
AIVYMHRFYMYHSFTKFHRNITSPTTLFLAAKVEEQPRKLEHVIKVAHACLNPQEAQLDI
KSDAYLQQAQELVILETIVLQTLGFEITIEHPHTDVVKCSQLVRASKDLAQTSYFMATNS
LHLTTFCLQYKPTVIACVCIHLACKWSNWEIPVSTDGKHWWEYVDKTVTLELLDELTHEF
LQILEKTPSRLKRIRNWRANQAAKKPRSEGQAADSSFPSPSLAQNPSLVDSIAGVSANAT
FPKASTSASFPVPLPSNAGAGGAPMQAGHSLDTMAAVTSSMQSASYNFTAPNDWPQHQDQ
SRPEVYTLKQEVLSMQPGASGQLHPALHHRPDKSADFPTNKHEHKSGGGKHPPQIYTPPV
ATPQKMSLDKYREKQAAEFAIQKRKLEGLETEARDSYVPAAQALADQQHHKKHAQPPQNP
GCSSVASPIKMKIPLANSDKPDKHGAEKKDKGCSLKLRIPILPTEKPASKEELKMKIKVS
SERHSSSDEGSGKSKHSSPHVGKEHKEKHRDHSSHRHHGGGGHKHSHSHSHLHGGGVKAG
ADGVAAAALALRSPVGLSGEAGIPGSSSSRKRPHPDVSHNHHSKMSKSSKSSGSSSHSSS
VKQYVSSHSSVLNLPFPPPPPVTYQVGYGHLSTLVKLDKKPVETNGPDANHEFNANSQHM
DYKDTFDMLDSLLSAQGMNM
NT seq 2223 nt   +upstreamnt  +downstreamnt
atggcggcgtgccggggctccacttcgagatggtttttcacccgggagcagctggaagcc
acgccgtcccgccgctgtggagtcgagccggacaaggagctgtcctaccgacaacaagcg
gctaaccttattcaagatatgggccagagactcaacgtctcccagctgacgataaacact
gcaatcgtttacatgcataggttttatatgtaccattctttcacgaagttccacagaaat
atcacttctccaacgacgttattcttggctgccaaagttgaggagcagccgcgtaaactt
gaacatgtcatcaaagtagcacatgcctgcttaaatcctcaagaggcacagctcgatata
aagagtgatgcatacctccagcaagctcaagagctggtgatacttgaaaccatagtgctg
cagactttaggttttgaaataacaattgaacatcctcatactgatgttgtgaaatgttcc
cagctagtgagagcaagcaaggatttggcacagacttcctatttcatggctaccaacagc
ctgcacctaactactttctgtcttcagtacaagccgactgtgatagcgtgtgtgtgcatt
catttggcttgtaaatggtccaactgggagatccctgtatccacagatggaaaacattgg
tgggaatatgtggacaaaactgtcacgctagaactgcttgatgagctgacacatgagttt
ctgcagatactggagaagacgcccagcagactgaagaggattagaaactggagggccaat
caggctgccaagaaacccaggagcgaaggccaggcggccgacagctcttttccgagtcct
tccttggctcagaatccgtctttggtggacagtattgctggagtgtccgcaaacgcgacg
ttccccaaagcatccacctcggcgtccttcccggttcccctgccctcgaacgccggggca
gggggcgctcccatgcaggccggccactcccttgacaccatggcggcagtgacgtcaagc
atgcagagcgcctcgtacaacttcaccgcccccaacgactggccgcagcaccaggatcag
agtaggcccgaggtgtacactctcaaacaggaggtgctgagtatgcagcctggggcctct
gggcagctgcatcctgccctccatcaccggccggacaagagcgccgacttccccacgaac
aaacacgaacacaagtcgggcggcggcaagcaccccccccagatctacaccccgcccgtc
gctaccccccagaaaatgtctttggacaagtaccgggagaagcaggctgcggagttcgcg
atacagaagcggaagctggagggcctcgaaacggaagccagggactcctacgtgccggca
gcccaggcgctggcggaccagcagcaccacaagaagcacgcccagccgccgcagaacccg
ggctgcagctccgtggcgtcccccatcaaaatgaagatccccctcgcgaactccgacaag
cccgacaagcacggggcggagaagaaggacaagggctgctccctgaagctgcggatcccc
atcctgcccacggagaagccggccagcaaggaggagctgaagatgaaaatcaaggtctcc
tcggagaggcacagctcctccgacgagggcagcgggaagagcaaacattccagcccgcac
gtcggcaaggagcacaaggagaagcacagggaccattcctcccaccgccaccacggcggc
ggcggccacaagcattcccactcgcattcccacttgcacggcggcggcgtcaaggcgggg
gccgatggcgtggcggccgcggccctggcgctgcggagcccggtaggtcttagcggcgaa
gcgggcatccccggctccagctcttcccggaagaggccgcaccccgacgtcagtcacaac
caccactccaaaatgagcaaaagttccaaaagttcaggtagttcctctcattcttcctct
gtaaagcagtatgtatcgtctcacagctctgttcttaacctgcccttcccccctcctccc
cctgtcacataccaggtgggctacggacatctcagcaccctagtgaaactggacaagaaa
ccagtggagaccaacggccctgatgccaaccatgaattcaatgcaaacagccagcacatg
gactacaaagacacattcgacatgctcgattcgctgttaagtgcccaaggaatgaacatg
taa

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