Lepisosteus oculatus (spotted gar): 102686279
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Entry
102686279 CDS
T07349
Symbol
chrna1
Name
(RefSeq) acetylcholine receptor subunit alpha
KO
K04803
nicotinic acetylcholine receptor alpha-1
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
loc04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
102686279 (chrna1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
102686279 (chrna1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
loc04040
]
102686279 (chrna1)
Ion channels [BR:
loc04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
102686279 (chrna1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
EVI2A
Claudin_2
Motif
Other DBs
NCBI-GeneID:
102686279
NCBI-ProteinID:
XP_015214325
Ensembl:
ENSLOCG00000007282
LinkDB
All DBs
Position
LG12:15894710..15911622
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AA seq
460 aa
AA seq
DB search
MTHLRSFSKLVPLFVILTGSTLGSEHETRLVKDLFKGYNKVVRPVENYKDPVVVTVGLQL
IQLISVDEVNQIVTTNVRLKQQWKDVNLKWEPDSYGGIKKIRIPSTDIWRPDLVLYNNAD
GDFAIVHETKVLLEHTGMITWTPPAIFKSYCEIIVTYFPFDLQNCSMKLGTWTYDGTSVI
INPESDRPDLSSFMESGEWVMKDYRGWKHWVYYACCPDTPYLDITYHFLMLRLPLYFIVN
VIIPCLLFSFLTGLVFYLPTDSGEKMTLSISVLLSLTVFLLVIVELIPSTSSAVPLIGKY
MLFTMVFVITSIIITVIVINTHHRSPSTHTMPQWVRKIFIDTIPNIMFFSTMKRPSREKQ
EKRIFVTDMDISEISGKPTPASITFQSPITKNPDVRTAIEGVKYIAETMKSDQESNNAAE
EWKFVAMVIDHVLLCVFMLVCIIGTLSVFAGRLIELNQQG
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgactcatttaaggtccttttccaagctggtgccactttttgtcattttaacggggtct
accctgggctcagaacatgaaacgcgtctagtcaaagaccttttcaagggctataataaa
gtggtgcgaccggtcgagaactacaaggatcctgtagtggtcactgtgggccttcagctc
atccagctcatcagtgtggatgaagtcaatcagatagtgacgacaaatgtgcgtctgaaa
cagcaatggaaagatgtcaacttaaaatgggaaccagactcatatggtggaatcaaaaag
atccgaattccatcgactgacatctggcgacccgaccttgttctctacaacaatgctgat
ggcgatttcgctattgttcacgaaaccaaagtgctgctggaacatacaggcatgatcacg
tggactcctccggccatattcaagagttactgtgaaatcatagtcacatacttccccttt
gacctgcaaaactgcagcatgaagctggggacctggacatatgatggcacatcagtgatc
atcaatccggaaagcgatcgcccggacctgagcagcttcatggagagcggggagtgggtg
atgaaggattaccgtggctggaaacactgggtctattatgcctgctgtcccgacaccccc
tatctggacatcacctaccatttcctcatgctgcgtctgcctctgtacttcatcgtcaac
gtcatcatcccctgtctgctcttttccttcctcacaggcctggtcttctacctgcccaca
gattcgggtgagaagatgaccctgagcatatcggtcttgctgtccctgactgtgtttctg
ctggtgatcgtggagctcatcccttccacctccagtgctgtgcctttaattgggaaatat
atgctgttcaccatggtgtttgtcatcacatccatcataattacagtgatcgtaattaat
acccaccaccgctcgccaagtactcacaccatgccacagtgggtgcgtaagattttcatt
gacaccattcccaacatcatgttcttctcgacgatgaagcggccttcaagggagaaacaa
gagaagcgcatttttgtcaccgacatggacatctctgaaatttctggcaaacctactcca
gcctccatcactttccagtcccccatcaccaaaaaccctgatgtgaggaccgccattgaa
ggagtcaaatacatcgcagaaaccatgaaatcggaccaggaatccaacaatgccgccgag
gaatggaagttcgtcgccatggtgattgatcacgtcttgctctgtgtcttcatgcttgtt
tgtatcatcggcacgctgagtgtctttgctggccgtctcattgaactcaatcagcaggga
tag
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