Lepisosteus oculatus (spotted gar): 102686334
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Entry
102686334 CDS
T07349
Name
(RefSeq) VPS10 domain-containing receptor SorCS3-like isoform X1
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
loc
Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
loc04131
]
102686334
Membrane trafficking [BR:
loc04131
]
Endocytosis
Others
Others
102686334
Endosome - Lysosome transport
102686334
Endosome - Golgi transport
102686334
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
102686334
NCBI-ProteinID:
XP_006630890
Ensembl:
ENSLOCG00000011988
UniProt:
W5N282
LinkDB
All DBs
Position
LG5:32089792..32362056
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AA seq
1279 aa
AA seq
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MERGAGLCPGLYLALWTWLLISTHILITAKAEITCTSCPSRAKLKRGGLMLFTRVDATET
GTLSSQQIRSHSQVAGDFSSKTGNGNGSDAAAPGDVMKLAKGVRMARSRVDVVYSKVALR
SSLESGEKEEKNTSQEVTTEEMKLAHFRNKAAVRNKLSEADDKTKSEDTKFPRVKRSGPE
LSKLMEKVKTSSSAQLEGSHSDDKKSADPLLGGHRLSRSEFKWTRDENKAVNARQDEVKL
ISTTFSLTGDSAHNQAMVHWSGHNSSVILILTKLYDFNLGSVTESSLWRSTDYGTTYEKM
NDKVGLKTVLSYLYVCPTNKRKIMLLSDPEIESSVLISSDEGASYQKFRLNFYILSLLFH
PTHEDWILAYSHDQKLYSSLDFGRKWQLVHEHVTPNRFYWSVIGLDKESDLVHMEARTDD
GRAQYVTCRVQECSEPNRHHPFPSYIDTNSLVVQDDYVFIQVTTAGRASYYVSYRREPFA
RIKLPKYSLPKDMHIISTDENQVFAAVQEWNQNDTYNLYISETRGIYFTLALENVKTSRG
IEGNIMIDLYEVAGIKGMFIANRKLENQVKTYITYNKGRDWRLLQAPATDMGGNDIHCVL
PFCSLHLHLQISENPYTSGSISSKSSAPGIIVATGNIGAELSHKNIGMFISSDAGNNWSQ
IFEEEYSIWFLDKGGALVAIKQATAPIRHLWISFDEGKQWSRYSFTLAPLFVDGVLVEPG
TESQIMTFFGHFSHRSEWQLVKIDYKSIFTRKCTEGDYQTWHLHNQGEPCVMGEKQIYMK
RRPGNHCMLGKDYSRILSAEPCICSASDFECDYGFERRGDGKCSPAFWFNPTAVSRSCSH
GQSYLNSTGYRKVVSNNCTAGVKELYTARRQQCPNRPPRGLHLVTSEGKLTATLSTNVTF
LIFLEDGDSMRINIQLDFGDGIAVSYSNLSLIEDGIKHVYKTAGIYRVTALAENSLGFDS
TTLYLHVTCPIEHVHLSAPFVAIKNKEVNLTAVVWPSHSRTITYFWWFGNSTEPLITLEG
SISYTFSKEGMNTVTVQVSSGNTILQDTKTIAVHEFFKSLLLSFSPNLDEYNPDIPEWRQ
DAGRVIKKALVQVSDFPEEQLLVAVFPGIPTAAELFLLPYKNISEGRKKSESDLEQTSEI
LVSALNQNLVEFELKPGVRVIVYITQLTLAPLVDSSPRHSSSAMLMLLSVVFVGLAVFLI
YKFKRKIPWINIYAEVNHEKEQEMIGSVSQSESAPKITLSEFSSPEERLEKELETRVIGG
IPKVSESESTREIPNCTSV
NT seq
3840 nt
NT seq
+upstream
nt +downstream
nt
atggagaggggggctggcttgtgcccaggcttgtacttagctctatggacctggcttctg
atctccactcatatcctgattactgccaaggctgagataacttgcacatcatgcccatca
cgggctaaactgaaacgggggggattaatgttgttcacgcgtgtggatgcaacggagaca
gggacgctatcttctcagcagattcggagtcattcccaagtagccggggattttagctct
aagactggaaatggaaatggttcggatgcagctgctcctggggatgtgatgaaattggct
aagggtgtcagaatggctcgttcaagagtggatgtagtgtattccaaagtagccttgagg
agttcgcttgaatccggggagaaagaagaaaaaaacactagtcaagaagtgaccaccgag
gagatgaaattggctcattttagaaacaaagcagcggtaagaaataaactttccgaggcc
gatgacaagaccaaatctgaggacaccaagtttccgagggtgaagaggagtggacccgaa
ctgtcaaaattaatggaaaaggtgaagaccagtagcagtgctcaactggaaggaagtcat
tcagatgacaagaaaagtgctgaccctttgctgggtggacacagactgagcaggtccgag
tttaaatggaccagggatgaaaacaaggcagtaaacgccagacaagacgaggtgaagcta
atcagcactactttctccctgacaggagattccgctcacaatcaggcaatggtgcactgg
tcaggacacaacagcagcgtgatcctcatcttgacaaagctctatgactttaacctggga
agtgtcacagaaagctcattatggagatcaactgactatggaacaacatatgagaaaatg
aatgacaaagttggactgaaaacggtgctgagttatctctatgtgtgcccaacaaacaag
aggaagataatgcttctaagtgatccagagattgaaagcagcgtactgatcagttcagat
gaaggagcaagctatcagaaattccgtctgaacttctatatattaagcctgctgtttcat
cctacacatgaagactggattctggcctacagccatgaccaaaagttgtacagctctttg
gactttggacgaaaatggcaactggttcatgagcatgtgactccaaacagattttactgg
tctgtaattgggttagacaaggagtcagatctggtacacatggaggcccgcactgatgat
ggacgtgctcaatatgtaacatgccgggttcaggaatgttctgaaccaaacagacaccat
cctttcccaagctacattgacacaaattcccttgtcgttcaggatgactatgtcttcatt
caggttacaacagcaggtcgggccagttactatgtatcctatcgacgagagccatttgcg
cgcatcaagctaccaaaatactcactaccaaaagacatgcacatcatcagtacagatgag
aatcaggtgtttgcagctgtgcaagagtggaatcagaatgacacatacaacctttacata
tcggagactcgagggatctatttcacgctcgccctggagaatgtgaaaaccagcaggggg
atagaaggaaacatcatgatcgacctctatgaggtagcagggataaaaggaatgttcata
gccaacaggaagcttgagaaccaagtgaagacctacatcacgtacaacaaaggcagagat
tggcgtttactgcaggcacctgccacagacatgggaggcaatgacatccattgtgttcta
ccattttgttccctacatctgcatttgcagatttctgaaaatccctatacttctggaagt
atctcaagcaaaagctcagctccaggaatcatagtggctacaggtaatattggtgctgag
ctttcacacaagaacattggaatgttcatatcatcagatgctggaaataactggagtcag
atttttgaggaagagtacagtatctggtttctggacaagggcggtgctctggtggctatc
aaacaagcaacagcacctatcagacatttgtggataagttttgatgaagggaaacagtgg
agcagatacagtttcaccctggcgcctttgtttgtcgatggagtgttggtagagcctggg
acagaaagtcagataatgacgttttttggacacttcagccatcgttctgagtggcagctt
gttaaaatagattacaagtccatctttactaggaaatgcaccgaaggagattatcagaca
tggcacctacacaatcagggtgaaccttgtgttatgggagaaaaacagatctacatgaag
cgcagaccagggaaccactgcatgctgggaaaggactactccagaattctgtctgctgag
ccttgtatctgtagtgcctcagactttgaatgtgattacgggtttgagcgtcgtggagat
ggaaagtgctctcctgccttttggtttaaccctactgcagtatcaagaagctgtagccat
gggcagagctatcttaacagcactggctaccgtaaggtggtgtccaataactgcactgct
ggggtaaaggagctgtacacagccaggaggcagcagtgtcctaatcggcctcctaggggc
ctccatctcgtcaccagtgaaggaaagctgacagccaccctgagtaccaacgtcactttc
ctcatctttctggaagatggtgactccatgagaataaacatccagctggatttcggagat
ggcattgctgtgtcctactctaatctcagcttgattgaggatggcatcaaacacgtctac
aagactgctgggatataccgagtgactgctcttgccgaaaacagcctggggtttgatagc
acaaccctctacttacacgtaacctgtccaattgagcatgtgcatctctctgctccattt
gtggctataaagaacaaggaagttaacctcactgctgttgtgtggccaagtcattcaaga
acaatcacttacttctggtggtttgggaacagcactgagcctttgataaccttggaggga
agcatctcatatactttttccaaagaaggaatgaacactgttacagtgcaggtctcttct
ggcaataccatactacaagacacaaagacaatagcagtccatgaatttttcaaatcgctc
cttttatctttctcccccaatctggatgagtacaaccctgatatccctgagtggagacag
gatgctggcagagtaattaagaaagctctggtacaagtgtccgacttcccagaggagcag
cttttagttgcagtatttcctggtataccaacagctgctgaactttttctgttgccatac
aaaaacatatcagaggggagaaaaaagagtgaatctgatctggagcagacttcggagata
ctcgtcagtgccctgaatcaaaatttggttgagtttgagttgaagccaggagttcgagtc
atcgtttacatcactcagttgacactcgcacctcttgttgactccagtccaagacacagc
agttcagccatgttgatgctcctgtcagttgtttttgtgggtttagctgtttttttaatc
tacaagtttaaaagaaaaattccatggatcaatatttatgctgaggttaaccatgagaag
gaacaggagatgattggctcagtcagccaaagtgagagtgcacccaaaattactctgagt
gagttttctagtcctgaggaacggctggaaaaggagttggaaaccagggtcataggagga
atccctaaagtcagtgagagtgaaagcacaagggaaattccaaactgcactagcgtttaa
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