Lepisosteus oculatus (spotted gar): 102686370
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Entry
102686370 CDS
T07349
Symbol
sptbn1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc04517
IgSF CAM signaling
loc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
102686370 (sptbn1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
102686370 (sptbn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
loc04812
]
102686370 (sptbn1)
Cytoskeleton proteins [BR:
loc04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
102686370 (sptbn1)
Intermediate filaments
Intermediate filament-binding proteins
102686370 (sptbn1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SOS1_NGEF_PH
PH_11
NPV_P10
Motif
Other DBs
NCBI-GeneID:
102686370
NCBI-ProteinID:
XP_006638477
Ensembl:
ENSLOCG00000015528
UniProt:
W5NER6
LinkDB
All DBs
Position
LG16:2247792..2360230
Genome browser
AA seq
2352 aa
AA seq
DB search
MTSVASEFDHMEIQQQYTDVNNRWDADDWDNENSSARLFERSRIKALADEREAVQKKTFT
KWVNSHLARVSCRITDLYMDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKALQ
FLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALLL
WCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNLA
EQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIETE
KMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKGN
LEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRTELIRQEKLE
QLARRFDRKAAMRETWLSENQRLVSQDNFGYDLQAVEAATKKHEAIETDIAAYEERVQAV
VAVARELEAENYHDIKRITARKDNVIRLWEYLLELLRARRQRLEMNLGLQKVFQEMLYIM
DWMDEMKVLLLSQDYGKHLLGVEDLLQKHALVEADISIQADRVKAVNASAQKFASDVEGY
KPCDPQVIRDRVAHMEFCYQELCQLAVERRARLEESRRLWKFFWEMAEEEGWIREKEQIL
SSEDYGKDLTSVVRLLSKHKAFEDEMSGRSGHLQQSTREGEEMVANDHFGSDKIRERIRD
IQEQWANLERLSAVRKKCLEEASNLHQFQADADDIDTWMLDILRIVSSSDVGHDEYSTQA
LVKKHKDVAEEITSYRPVIDSLHEQSRTLPAEHTQSPEVQGRLVGIEERYKEVAELTRLR
KQALQDALALYKMFSEADACELWIDEKEQWLISMEIPEKLEDLEVIQHRFESLEPEMNNQ
ASRVAVVNQIARQLVHSGHPSEKEIKAQQDKLNTRWSQFRDLVDQKKDSLNSALGVQNYH
LECNETKSWIREKTKVIESTQELGNDLAGVMALQRKLTGMERDLAAIEDKLGDLQKEADR
LAAEHPDQAQAIMGRLAEITGVWEEMKTTLKNREESLGEASKLQQFLRDLDDFQSWLSRT
QTAIASEDMPNTLTEAEKLLTQHENIKNEINNYEEDYQKMRDMGEMVTQGQTDAQYMFLR
QRLQALDTGWNELHKMWENRQSLLSQSHAYQLFLRDTKQAEAFLNNQEYVLAHTEMPATL
EAAEAAIKKQEDFMTTMDANEEKINAVVETGRRLVSDGNINADKIQEKVDSIDDRHKKNR
EAASELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFMA
ELQSNKEWLDKIEKDGMQLVAEKPETEEVVKEKLSALHTMWEELESTTQTKAQCLFDANK
AELFTQSCADLDKWLVNLEGQIQSDDYGKDLTSVSILLKKQQMLENQVEVRKKEVEELRS
QAQALSQEGKDTDEVDGRRQVVEKKFQELLEPLLKRKSNLMASKEIHQFNRDVEDEILWV
EERMPVATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRIDDIFERSQNILTDGSPNAEA
IRQRLADLRRLWGLMIEETEKRHGRLEEAHKAQQYYFDAAEAEAWMSEQELYMMSEEKAK
DEQSAVAMLKKHQILEQAVEDYAETVHQLSKTSRALVAVGHPESERISMRQSQVDKLYAG
LKDLSEERRGKLDERYRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFRE
FARDTGNIGQERVDAVNQMADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQILA
ASYELHKFYHDAKEILGRILDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVRQ
LQEDAARLQSAYAGDKADDIQKRENEVLEAWKALLDACEGRRVRLLDTGDKFRFFSMVRD
LMLWMEDVIRLIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCVELGKSLLARKH
YASEEIKEKLLQLTDKRKDMIDKWEDRWEWLRLILEVHQFSRDAGVAEAWLLGQEPYLSS
REMGQSVDEVEKLIKRHEAFEKSAATWEERFSALERLTTLELLEVRRQQEEEERRRKPPS
PEPLPAPQESEPDQQWDGKEGEQVSQNGLPSDQESPRGPDAVDGGDIVNGVAEPRSSSKE
PSPIPSPTSDRKTKGSSLPTKSDSPSAQMEGFLHRKHEWEGHNKKASSRSWHNVYCVINN
QEMGFYKDNKNASQGIPYHNEIPISLKDAVCEVAVDYKKKKHVFKLRVTDGNEYLFQAKD
DEEMNSWIQAISTAVSSDKSEVTPSGQSTPASSRAQTLPASVTLTTESSPGKREKDKEKD
KEKRFSLFSKKK
NT seq
7059 nt
NT seq
+upstream
nt +downstream
nt
atgacatcagtagcctcggagttcgaccacatggaaattcaacagcaatacaccgacgtc
aacaaccgctgggacgcagacgactgggacaatgagaacagctcggccaggctgttcgag
aggtcccgcatcaaggccctcgcagacgagcgcgaggcggtgcagaagaagaccttcacg
aaatgggtgaactctcacctggcgcgcgtgtcgtgccggatcacagacctgtacatggac
ctgcgtgatggacgcatgctcatcaagctgctggaggtgctgtcgggagagagactcccc
aagcccacaaagggaaggatgcgcatccactgcctggagaacgtggacaaggccctgcag
ttcctgaaggagcagagagtccacctggagaacatgggttcccatgacatcgtcgacggc
aaccacaggctcacgctgggcctcatctggaccatcatcctccgcttccagatccaagat
atcagtgtggagactgaagacaacaaggagaagaaatctgccaaggatgccttgctcttg
tggtgccagatgaagactgctggctaccccaacgtcaacattcacaacttcaccaccagc
tggagagatggcatggccttcaacgcactcattcacaaacacagacctgacctgattgac
ttcgacaagctcaagaagtccaacgcacactacaacctgcagaacgcctttaacctcgcc
gagcaacacctcggcctcactaagctcctggacccagaagacatcagcgtggaccaccca
gatgagaagtccatcatcacctacgtggtgacctactatcattacttctccaagatgaag
gccctggccgtggaagggaaacgaattgggaaggtgctggacaacgccattgagacggag
aagatgatcgagaaatacgagtccctggcctccgatcttctggagtggatcgagcagacc
atcatcatcctcaacaaccgcaaattcgccaactccctggtgggggtgcagcagcagctg
caggctttcaacacgtaccgcactgtggagaaaccccccaagttcacagagaagggtaac
ctggaagtgcttctgttcaccattcagagcaaaatgagggccaacaaccagaaggtatac
atgcccagagaagggaaactcatctcagatatcaacaaggcctgggagagactggaaaaa
gccgagcacgagcgcgagctggctctgaggacggagctcatccggcaggagaagctggag
cagctggctcgccggttcgaccgcaaggcggccatgagggagacctggctgagcgagaac
cagcggctcgtctcgcaggacaactttggctacgacctgcaggcagtggaggccgctacc
aagaagcacgaggccatcgagacggacatcgcggcctacgaggagagggtccaggcggtg
gtggccgtcgcccgcgagctggaggccgagaactaccacgacatcaagcgcatcacagcc
aggaaggacaacgtgatccggctgtgggagtacctgctggagctgctgcgggcccggcgc
cagaggctggagatgaacctgggcctgcagaaggtcttccaggagatgctgtacatcatg
gactggatggacgagatgaaggtgctgctgctgtcccaggactatggaaagcacttgctg
ggggttgaggacctcctgcagaaacacgccctcgtggaagccgacatcagcatccaggct
gaccgagtgaaggctgtcaatgcctctgctcagaagtttgccagtgacgtagaagggtac
aagccctgtgacccgcaggtgatccgggaccgagtggctcacatggagttctgctaccag
gagctgtgccagctggcagtggagcgccgggcccggctggaggagtccaggcgcctctgg
aagttcttctgggagatggcggaggaggagggctggatccgcgagaaggagcagatcctg
tcctcggaggactatggcaaggacctgaccagcgtggtgcggctcctcagcaagcacaag
gccttcgaggacgagatgagcgggcgcagcgggcacctgcagcagagcacccgcgagggc
gaggagatggtggccaacgatcacttcggctccgacaagatccgcgagcgcatccgggac
atccaggagcagtgggccaacctggagcggctgtccgccgtccgcaagaagtgcctggag
gaggcctccaacctgcaccaattccaggccgacgccgacgacatcgacacctggatgctg
gacatcttgcgcatcgtgtccagcagcgacgtgggccacgacgagtactccacccaggcc
ctggtgaagaaacacaaggacgtggccgaggagatcaccagctaccggcccgtcatcgac
tctctgcacgaacagtctcgcaccctgcccgcggagcacacccagtcccccgaggtgcag
ggccggctggtgggcatcgaggagagatacaaggaggtggcggagctcacccgcctgcgc
aagcaagccctgcaggacgccctggcgctgtacaagatgttcagcgaggccgacgcgtgc
gagctgtggatcgatgagaaggagcagtggctgatcagtatggagatacccgagaagctg
gaggacctggaggtcatccagcacaggttcgagagtctggagcctgagatgaacaaccag
gcctcacgtgtagctgtggtgaatcagatcgccaggcaattggtgcacagcggacacccc
agtgagaaagagatcaaagcccagcaagacaagctcaacaccaggtggagccagttccgt
gacctggtggaccagaagaaggactctctcaactctgccctgggtgtgcagaactaccac
ctggagtgcaacgagaccaagtcatggatccgggagaagaccaaggtcatcgagtccacc
caggagctgggcaatgacctggcgggggtgatggccctgcaaaggaagctgacaggcatg
gagcgcgacctggccgccatcgaggacaagctgggcgacctgcagaaagaggcggatcgc
ctggcagccgagcacccggaccaggcgcaggccatcatgggccggctggcagagatcact
ggcgtgtgggaggagatgaagaccacactgaagaaccgcgaggagtccctgggggaggcc
agcaagctgcagcagttcctgcgcgacctggacgacttccagtcctggctctcccgcacc
cagacggccatcgcctccgaggacatgcccaacacgctgaccgaggctgagaagctgctc
acccagcatgagaacatcaagaacgagatcaacaattacgaagaggactaccagaagatg
cgcgacatgggcgagatggtcacgcagggccagacagacgcccagtacatgttccttcgc
cagcggctgcaggccctggacacgggctggaatgagctgcacaagatgtgggagaaccgc
cagagcctcctgtcccagtctcacgcctaccagctcttcctcagagacaccaagcaggcc
gaggccttcctcaacaaccaggagtatgtgctggcccacaccgagatgcccgccaccctg
gaggccgcagaggccgccatcaagaagcaggaggacttcatgaccacgatggacgccaac
gaggagaagatcaacgccgtggtggagaccggcaggaggctggtgagcgacggcaacatc
aacgcggacaagatccaggagaaggtggactccatcgacgacaggcacaagaagaaccgg
gaggcagccagtgagctcctgatgagactcaaagacaatagagacctgcagaaattcttg
caggactgccaggagctgtccctgtggatcaacgagaagatgctcacggcgcaggacatg
tcttacgacgaagccaggaacctgcacagcaaatggctgaagcaccaggccttcatggcc
gagctgcagtccaacaaggagtggctggacaagattgagaaggacgggatgcagctggtt
gcggagaagccagagactgaggaagttgtgaaggagaagctgtcggcgcttcacacgatg
tgggaggagctcgagtccacaacgcagaccaaggcccagtgtctctttgacgccaacaag
gcagagctgttcactcagagctgcgccgacctggacaagtggctggtgaacctggagggg
cagatccagtcggatgactatggcaaagacctgaccagcgtcagcatcctgctgaagaaa
cagcagatgctggagaaccaggtggaggtgcgcaagaaggaggtggaggagctgcgcagc
caggcccaggccctgagccaggaagggaaggacacggacgaggtggacggccgccggcag
gtggtggagaagaagttccaggagctgctggagcccctcctcaagaggaagagcaacctc
atggcctccaaggagatccatcagttcaacagagacgtggaggatgagatcctctgggtt
gaagaaagaatgccagttgcaacttccacagaccacgggcataacttacagactgtccag
ttactcatcaagaaaaaccagacgctccagaaggagatccagggccaccagccacgcatc
gacgacatcttcgagcggagccagaacatcctgacggacggcagccccaacgccgaggcc
atccgccagcggctggccgacctgcggcggctctggggcctcatgatcgaggagacggag
aagcggcacggccgcctggaggaggcgcacaaggcccagcagtactacttcgacgcggcc
gaggccgaggcctggatgagcgagcaggagctctacatgatgtcggaggagaaggccaag
gacgagcagagtgcggtggccatgctgaagaagcaccagatcctggagcaggcggtggag
gactacgccgagacagtgcaccagctgtccaagaccagccgggccctggtggctgtgggc
cacccagagagcgagaggatcagcatgcggcagtcgcaggtggacaagctgtacgcgggc
ctgaaggacctgtccgaggagaggagggggaagctggacgagaggtaccggctgttccag
ctcaaccgcgaggtggacgacctggagcagtggatcgccgagcgcgaggtggtggccggc
tcgcacgagctggggcaggactacgagcacgtcacgatgctgcaggagcgcttccgcgag
tttgcccgcgacacgggcaacatcggccaggagcgggtagacgccgtcaaccagatggcc
gacgagctgatcaactcgggccactccgacgccgccaccatcgccgagtggaaggacggg
ctgaacgaggcctgggccgacctgctggagctcatcgacacgcgcacgcagatcctggcc
gcctcctacgagctgcacaagttctaccacgacgccaaggagatcctgggccgcatcctg
gacaaacacaagaagctgcccgaggagctgggccgggaccagaacacggtggagacactg
cagaggatgcacaccaccttcgagcacgacatccaggccctgggcacacaggtgaggcag
ttacaagaggacgctgcccgtctccagtcagcctatgcaggggacaaggccgatgacata
cagaagagagagaatgaggtcctggaggcctggaaggccctgctggatgcttgcgagggg
cgcagggtgcgactgctggacaccggggacaaattccggttcttcagcatggtccgggac
ctcatgctctggatggaggatgtcatccgcctcatcgaggcacaggagaagcccagggat
gtttcatcggtggagttactgatgaacaaccaccagggaataaaggctgaaatcgatgcc
cgtaatgacagcttcactacctgtgtggagctgggcaagtctctcctggcacgaaaacac
tacgcatcagaagagatcaaagagaagttgctacagctgacagacaagaggaaagacatg
attgacaagtgggaagaccgatgggagtggctcagactgattctggaagtgcaccagttc
tcccgggacgcgggggtggcggaggcctggctgctgggccaggagccgtacctgtccagc
cgggagatgggccagagcgtggacgaggtggagaagctgatcaagcggcacgaggccttc
gagaagtcggccgccacctgggaggagcgcttctccgcgctggagcgcctgaccacgctg
gagttgctggaggtgcggagacagcaggaggaggaggaacgcaggaggaaacccccatcc
ccagagccgctgcctgctccccaggagtccgagccggatcagcagtgggatggaaaagaa
ggggagcaggtttctcagaacgggctgccatcagaccaggagtctccacggggcccggat
gcggtggacggaggcgacattgtgaacggagtcgctgagcccaggtccagctccaaggag
cccagccctatcccctctcccacttcggaccggaaaaccaagggctcctccctgcccacc
aaatcagactccccctccgcgcagatggagggcttcctgcatcgcaagcatgagtgggag
ggacacaacaagaaggcgtccagcagatcctggcataatgtatactgtgtgataaacaac
caggaaatgggtttctacaaagacaataagaacgctagtcagggcatcccatatcataac
gaaattcccatcagcctgaaggacgcagtgtgtgaggtggcagtggactacaagaagaag
aagcatgtcttcaagctaagagtgactgatggaaacgagtatctcttccaagccaaagat
gacgaggaaatgaacagctggatccaggccatctccacggccgtgagcagcgacaagtcc
gaggtgactcccagcggccagagcaccccagcttcgagccgggcgcagacgctgcccgcc
agcgtcaccctgaccaccgagtcgagtccaggcaagagggagaaggacaaggagaaggac
aaggagaagaggttcagcctcttcagcaagaagaaatga
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integrated database retrieval system
