Lepisosteus oculatus (spotted gar): 102686444
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Entry
102686444 CDS
T07349
Symbol
sbno1
Name
(RefSeq) protein strawberry notch homolog 1 isoform X1
KO
K26273
protein strawberry notch
Organism
loc
Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
loc03036
]
102686444 (sbno1)
Chromosome and associated proteins [BR:
loc03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
102686444 (sbno1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
Helicase_C
Motif
Other DBs
NCBI-GeneID:
102686444
NCBI-ProteinID:
XP_006640443
Ensembl:
ENSLOCG00000005725
LinkDB
All DBs
Position
LG20:complement(7636699..7657769)
Genome browser
AA seq
1394 aa
AA seq
DB search
MMMDPGQDLLLAALSESGISPNDVFDIDPMDAGMPSAIQQPVPLSALDLGLGTEPLTTTI
KQEPAVVIKQEPALPPTPTVTIRKPQPSTTTFVLNQLNQLPSLGTIVVTKPSVGTTSRQT
ITVAKVVQTSSTTRAPTTTVRTTLVPPSKDQIQLKDLLKTSSLNELMKLKPPPNIAQPVA
TATTEINNGVKKEVSNKDVARIWINDDLKMRSFSPTNKIPGIKEEEEPEEEEEEELGHAE
TYAEYMPMKLKIGLRHPDPVVETSSLSSVSPPDVWYRLSIPEETIDRGWLSALQLEAITY
AAQQHETFLPNGDRAAYLIGDGAGVGKGRTIAGIMYENYLLGRKRSLWFSVSNDLKYDAE
RDLRDIGAKNIQVHSLNKFKYGKISSKHNGSVKKGVIFATYSSLIGESQSGGKYKTRFKQ
LLHWCGEDFDGVIVFDECHKAKNVCPIGSSKPTKTGLAVLELQNKLPKARVVYASATGAS
EPRNMAYMNRLGIWGEGTPFKEFSNFIQAVERRGVGAMEIVAMDMKLRGMYIARQLSFAG
VTFKIEEVPLSQDYIKMYNKAVRLWVSAREKFQQAANLMDAELRMKKSMWGQFWSAHQRF
FKYLCIASKVKRVVQLAREEVKNGKCVVIGLQSTGEARTLEALEEGGGELNDFVSTAKGV
LQSLIEKHFPAPDRQKLFSLLGIDLSAKKTPSPNDNASTDQKGKKRKGQESKKEAKKPRT
SGGLSGSSSDESDVDEDSEKGSSDNDSFKSGSSGEEDEDDFNPFRDESSEDDEEDPWLFR
KEHKKGKIKKNKKKKKSIDPDSIQSALLASGLGSTRPNFTTPAVKTPASSAPSVAKKESD
SNSCVTSQDAVEIAQQMKRALLEHLEKLSEELPPNTLDELIDELGGPDNVAEMTGRKGRV
VSNDDGSISYESRSELDVPVEILNITEKQRFMDGEKNIAIISEAASSGISLQADRRVKNQ
RRRVHMTLELPWSADRAIQQFGRTHRSNQVTAPEYVFLISELAGEQRFASIVAKRLESLG
ALTHGDRRATESRDLSRFNFDNKYGRNALEIVMKSIVNLDSPLVSPPANFEGDFFKEIRH
GLIGVGLINVEDRSGILTLDKDYNNIGKFLNRILGMEVQQQNALFQYFSDTLNAVIQNAK
KNGRYDMGILDLGSGDEKVKKIDVKKFLTPGYSTSGHVELYTVSVERGMSWEDATCIWAE
QTGPDDGFYVQVRNNKKTAILVKEVNAKKRLFLVYRPNTGKQLKLETYADVRKKCKKVLS
DDAKQHWMDQYISSADTCSHAYWRGNCKKASIGLQCEVGLRCRMYYVLCGSVLSVWTKVE
GVLASVSGTNVKMQIVRLRTEDGQRIVGLIIPANCVAPLINILSSSDQSQQLAVQQQQMW
QQLHPQSINAFSNT
NT seq
4185 nt
NT seq
+upstream
nt +downstream
nt
atgatgatggatccaggtcaagatctgctgcttgctgctctgagcgagagtgggatcagc
cccaatgacgtcttcgatattgaccctatggatgctggcatgccatcagccattcagcag
ccagtgcctctgagtgccctggatcttggtttgggaacagaaccactgacgaccactata
aaacaagagccagcagtggtgataaagcaggagccagcacttccacccactcctacggtc
actatcaggaagcctcagccatccaccacaacatttgtgctcaatcagctcaatcagctc
ccttccctgggaacaattgttgtgaccaaaccatctgttggcaccacatccagacaaacc
attacagtggccaaggttgttcagacctcctccacgacgcgggcgcccaccactactgtc
cggactaccctggtcccacccagtaaggaccagatccagctgaaagacctgctcaagacc
agcagcctcaatgagctgatgaaactcaagccacctccaaatattgcccagccagtggca
acagctacaactgaaataaataatggagtaaagaaggaggtctcaaacaaagacgttgca
agaatttggatcaatgatgaccttaaaatgaggagtttttcacctaccaacaaaatacca
ggcattaaagaggaagaggaaccagaggaggaggaagaggaagagctaggtcatgcagag
acatatgcggaatacatgccaatgaaattgaaaattggcttgcgccacccagatccagtt
gtggagaccagttcgctgtccagcgtttctcctcctgatgtctggtacaggctgtctatt
cccgaagagaccattgatagaggatggctttcagcactgcagctagaggccattacatat
gctgctcagcaacatgaaacattccttcccaatggagatagggctgcgtatttaatagga
gatggagcaggtgtcggcaaaggcaggaccatagcgggaattatgtacgagaattacctc
cttggtaggaaaaggtcactatggtttagcgtatccaatgacttgaagtatgatgccgaa
agagacttgagagacattggagcaaaaaacattcaagttcattcactgaataagttcaaa
tatggaaagatctcttccaagcacaatggaagtgtgaaaaaaggtgtcatttttgccact
tactcctctctgatcggtgaaagtcagtctggggggaaatacaagacccggtttaaacag
cttctgcactggtgcggtgaggacttcgatggagtaattgtgtttgacgaatgtcataaa
gctaaaaatgtttgtccgattgggtcttctaagcctactaagactggcttggctgtcttg
gaactccagaataagctaccaaaggcaagagttgtgtatgccagtgctacaggtgcttct
gagcccaggaatatggcgtatatgaatcgtcttggaatctggggtgaaggaaccccattc
aaggagtttagtaacttcatccaggctgtggaaagaagaggggtcggtgctatggaaata
gttgccatggatatgaaactaagagggatgtacatagcaagacagctgagctttgctgga
gtgaccttcaagatcgaagaagttcctctatcacaggactacataaagatgtataacaag
gcagttcgcttgtgggtaagtgcgagagagaagtttcagcaggcggccaacctcatggac
gcggagctgcggatgaagaaatccatgtgggggcagttctggtcagcacaccaaagattc
ttcaaatacctgtgcattgcgtccaaagtgaaaagggtggttcagcttgctcgagaagaa
gtcaaaaacggaaagtgtgtagttatcggtttgcagtccaccggggaagccaggacgctg
gaagcattagaagaaggaggaggggagttaaatgattttgtttccacagctaagggtgtg
ctgcagtccctgattgagaagcatttccctgcacctgatagacaaaagctcttcagcctg
ctgggaattgatttatcggcaaaaaaaactccttctcctaatgacaatgcttctactgac
cagaaggggaaaaaacgaaaaggtcaagaatcaaaaaaagaagcaaagaaaccccgcaca
tctggcggtctctcaggcagcagttctgatgaaagtgatgttgacgaagactcggaaaag
ggctcaagtgataacgacagcttcaagtctggcagctctggggaggaggacgaagacgac
ttcaatcctttcagagatgaatctagtgaggatgacgaagaggatccttggctattcaga
aaagagcacaaaaaaggcaaaataaagaagaataaaaagaaaaagaagagcatcgatcca
gattctattcaaagtgccttgttagcatctggtcttgggtcgacaagacctaattttaca
actccagctgttaaaactccagctagcagtgcaccttcagttgcaaaaaaagagagcgac
agtaacagctgtgtaactagtcaagatgccgttgaaattgcccaacagatgaaacgagcg
ttacttgaacacctggaaaaactttcagaagagcttcctcctaacacactggatgaactg
atcgatgaactaggaggccctgataatgtggccgagatgactgggaggaagggcagagtc
gtgagcaatgatgatgggagcatatcttatgaatcgaggtctgagcttgatgttcctgtg
gaaatcctgaatatcacagaaaaacagagattcatggatggagaaaagaacattgccatt
atttcagaagctgcaagctctggtatttcattacaagcagaccggagagttaaaaaccag
agaagaagagtgcacatgactttggagttgccatggagtgctgacagagcaattcagcag
tttggaagaacacacagatctaaccaagtgacagccccagagtatgtgtttcttatttct
gagcttgctggagagcagaggtttgcctcaatcgtcgccaaacgccttgagagccttggt
gccctaacccatggtgacagaagagccactgaatccagagatttgagcagattcaatttt
gacaataagtatggacgaaacgccttggagatcgtcatgaagtccattgtgaatttggat
tcccctttagtgtcgccaccggctaactttgaaggggatttcttcaaagaaattcgtcat
ggtttaattggagtaggattgataaatgttgaagaccgttcaggaattctcacattggat
aaagattacaacaacatcggcaagtttctgaacaggattcttggcatggaggtccagcag
caaaatgcactattccagtatttctccgatactctgaatgctgttatccagaatgccaag
aagaacggccgttatgacatgggcattttggatcttggctcaggtgatgagaaagtgaag
aagattgatgtgaagaagtttctcacccctggatattctacctcaggacatgttgagttg
tacacggtaagtgtggagagaggtatgtcttgggaagatgcaacttgcatttgggctgag
caaactgggccagatgatggcttttatgtacaggtaagaaataataagaagactgcaatc
ctggtgaaggaagtcaatgccaaaaagaggctatttcttgtgtacagaccaaacacaggg
aagcagcttaaactagagacctatgcagacgtccggaagaaatgtaaaaaggtactttca
gacgatgctaaacagcactggatggatcagtacatttcgtcagctgacacctgttcgcat
gcctactggcgaggtaattgcaagaaagcgtcaatagggcttcagtgtgaagttgggctc
cgctgccgaatgtactatgtcctgtgtggatcggtgctcagtgtttggactaaagtagag
ggcgttttagcgtcggtcagtggaaccaatgtgaaaatgcaaatcgttcgtttaagaact
gaggatggacaaagaatcgttggtttgatcattccagcaaactgcgtagccccgctgata
aacatcctgtcctcgtcagaccagtctcaacaacttgctgtccagcagcaacaaatgtgg
caacagcttcacccacagagcattaacgccttcagtaacacatag
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