Lepisosteus oculatus (spotted gar): 102686545
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Entry
102686545 CDS
T07349
Name
(RefSeq) transitional endoplasmic reticulum ATPase-like isoform X1
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc04137
Mitophagy - animal
loc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
102686545
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
102686545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
loc03019
]
102686545
03009 Ribosome biogenesis [BR:
loc03009
]
102686545
04131 Membrane trafficking [BR:
loc04131
]
102686545
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
loc04147
]
102686545
Messenger RNA biogenesis [BR:
loc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
102686545
Ribosome biogenesis [BR:
loc03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
102686545
Membrane trafficking [BR:
loc04131
]
SNARE
SNARE associated proteins
Others
102686545
Autophagy
Aggrephagy
Other aggrephagy associated proteins
102686545
Exosome [BR:
loc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
102686545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_5
CDC48_2
AAA_33
AAA_2
AAA_22
TIP49
RNA_helicase
AAA_28
AAA_14
NPHP3_N
Vps4_C
nSTAND3
Mg_chelatase
Parvo_NS1
AAA_17
ATPase_2
AAA_18
IstB_IS21
ATPase
DUF815
AAA_7
ABC_tran
AAA_24
ResIII
TsaE
Viral_helicase1
Sigma54_activat
NACHT
NB-ARC
SLFN-g3_helicase
KAP_NTPase
Zot
Motif
Other DBs
NCBI-GeneID:
102686545
NCBI-ProteinID:
XP_015205119
Ensembl:
ENSLOCG00000009961
UniProt:
W5MUX9
LinkDB
All DBs
Position
LG6:complement(24526229..24561492)
Genome browser
AA seq
807 aa
AA seq
DB search
MPATEGDSKGEDYSTAILKQKHRPNRLIVDEALNEDNSIVCLSQSKMEELQLFRGDTVLL
KGKKRRHTVCIVLTDDTCAEERVRMNRVTRNNLRVRLGDIISIQACPDVKYGKRIHVLPI
DETIEGLSGNLFEVFLKPYFLEAYRPVHKGDIFLVRGGMRAVEFKVVETDPTPHCIVAPD
TIIHCEGEPIKREDEEESLNDIGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPR
GILLYGPPGTGKTLVARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPA
IIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRSHVVVMAATNRPNSVDPALRR
FGRFDREIDIGIPDATGRLEILQIHTKNMKLSDDVDLERIATETHGHVGADVAALCSEAA
LQAIRKKMILIDLEDETIDADVLNSLAVTMDDFRWALGQSNPSALRETVVEVPQVNWEDI
GGLDEVKRELQELVQYPVEYPDKFLKFGMTPSRGVLFYGPPGCGKTLLAKAIANECQANF
VSIKGPELLTMWFGESEANVRDVFDKARQAAPCILFFDELDSIAKARGGGVGDGGGAADR
VINQILTEMDGMTNKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEGSRVAILRA
NLRKSPVARDVDLNYLAKITEGFSGADLTEICQRACKLAIREAIEAEIRTERERQNHPDV
AMDEDSDPVPEIRRDHFEEAMKFARRSVSDNDIRKYEMFAQTLQQSRGFGNFRFPSGSKS
GGGRGSGQADNDPGNLYRDEGEDDLYQ
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgccagcgacagaaggggattccaagggggaggattactccactgccatcctgaaacag
aagcatcgccccaaccggctaatcgtcgatgaagccctaaatgaagacaacagcattgtc
tgcctgtcacagagtaagatggaggagctccagctgttccgtggtgacacagtccttctg
aagggaaagaaacgcagacatacagtgtgtatcgttctgacagatgacacctgtgctgag
gaaagggtgcgcatgaaccgcgtcaccaggaacaatctgcgggtgcggctaggtgacata
atcagtatacaggcctgtcctgatgtaaaatatggaaaaaggattcatgtgttgcccatt
gatgagaccatagagggactttcagggaatctttttgaggtgttcctgaagccttatttt
ctagaggcataccggcccgttcacaaaggagacatttttctggtccgagggggaatgcgt
gcagtggagttcaaagttgtggagactgatcctacccctcactgcattgtggccccagac
accatcattcactgtgagggagagcccatcaagcgagaggatgaggaggagagcctgaat
gatattggctatgacgatattggtgggtgcaggaagcagcttgcccagattaaagagatg
gtggagctgcctctgcgacacccagccctcttcaaagccattggtgtgaagcccccccgt
gggatattgctctatggtccacctgggacaggtaaaactcttgtggctcgggctgtagcc
aatgaaacaggagcattcttctttctgatcaatggcccagaaatcatgagcaagctggca
ggagagtcagaaagcaacctcagaaaggcatttgaggaagcagagaagaatgccccagct
atcattttcatcgatgagctggatgcaattgcaccaaagagggagaagacccatggggag
gtggaaaggcgaatcgtttctcagcttctcactctaatggatggactcaagcagcgttca
catgttgttgtcatggcagccacaaacaggcccaacagtgtggacccagcactgcgcaga
tttggacgatttgacagggaaatcgacatcgggatcccggatgccaccgggcgtctagaa
atcctgcagattcacaccaagaatatgaagctgtctgacgatgtagatttggagaggatt
gccactgagactcatgggcatgtgggcgccgacgtagctgcactctgctctgaggctgct
ctgcaggccattcgtaagaaaatgattctgattgacctggaagatgagacaatcgatgct
gatgtccttaactcactagctgtcacgatggatgacttcaggtgggcacttggccaaagt
aacccttctgctctgcgggagacagtggtggaggtgccccaggtgaactgggaggatatc
ggaggattggatgaagtaaaaagagagcttcaggagttggtgcagtaccctgtggagtac
ccggacaagttcctgaagtttgggatgactccatctcgtggagttctgttctatgggccc
ccaggctgtggcaagacccttctagcaaaggccattgccaatgagtgccaggccaatttt
gtgtccattaagggccctgagctgctcactatgtggtttggggagtctgaggccaatgtc
cgcgatgtgtttgacaaggcacggcaggcagctccttgtatcttgttcttcgatgagctg
gactccatcgccaaggcccgaggaggtggtgtgggggatgggggaggcgcagcagaccgt
gttatcaaccagatcttgaccgagatggatggaatgaccaacaagaaaaacgttttcatc
attggggccacgaacaggccagacatcattgacccagctatcctgaggcctggaaggctg
gaccagctaatttatattcccctgcctgatgaggggtcccgagtagccatcctcagagcc
aacctgcgcaagtctcctgtggcccgggatgttgatctgaactacttggccaagatcaca
gagggcttctctggagctgacctcacagagatctgccagcgtgcctgcaaactggcaatt
agagaagccatagaggcagagatacgcactgagcgtgaaaggcagaaccacccagatgtg
gctatggatgaggactctgaccctgttcctgagatccggcgtgatcactttgaggaggcg
atgaagtttgcccgccgctccgtcagcgacaatgatatccggaagtatgagatgttcgca
cagactctccagcagagccgcggctttggaaatttcagatttccttctggatccaagtct
ggtggaggacgaggctcgggacaggcagacaatgacccaggaaacctctacagagatgaa
ggggaggatgacctctatcagtga
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integrated database retrieval system
