Lepisosteus oculatus (spotted gar): 102686776
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Entry
102686776 CDS
T07349
Symbol
dhx36
Name
(RefSeq) ATP-dependent RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102686776 (dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
loc03019
]
102686776 (dhx36)
03012 Translation factors [BR:
loc03012
]
102686776 (dhx36)
Enzymes [BR:
loc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
102686776 (dhx36)
Messenger RNA biogenesis [BR:
loc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
102686776 (dhx36)
Translation factors [BR:
loc03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
102686776 (dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
HA2_N
AAA_22
nSTAND3
AAA_19
ATPase
NB-ARC
AAA_14
Sir1
NPHP3_N
AAA_16
PhoH
Motif
Other DBs
NCBI-GeneID:
102686776
NCBI-ProteinID:
XP_006637568
Ensembl:
ENSLOCG00000002125
UniProt:
W5M2A6
LinkDB
All DBs
Position
LG14:complement(3015615..3047826)
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AA seq
991 aa
AA seq
DB search
MSYGYGSWRGRRGGRGSGEDSGERWDRGAGSSRGGYQRNPGGDHREDEDSFRGRHPSHLK
GREIGLWYAKRGGVKRKEQERKSRAVVQMDESREHHITQLLNSVQTDSAPKEARSSASEA
PQPHRDSQRVFRSDSATQKDTKEVNDHDLEYLFQDIVRDSSLDQQLKRDLQRKKTDPKYL
EMLKFREKLPSYSMRKELVDLIRGNQVVVVSGETGCGKTTQVTQFILDDYIEREMGSLCR
VVCTQPRRISAISVAERVAAERAEKCGEGNSSGYQIRLDCQLPRKQGSILYCTTGIILQW
LRSDSHLSSISHVVLDEIHERNLQSDVLITIVKDLLELRDDLKIILMSATLNADKFSKYF
DKCPMIHIPGFTFPVKEYLLEDVVEMLRYRPQAQDRRPQWKKRFMQGQQFRPEKEEKEEE
YRETWPSYARSLRDRYSDSTIEVLEMLDDDDKIDLPLIVELIRYIVRNDEDGAILVFLPG
WDNISTLNDLLMAQQMFKSDNFIIIPLHSLMPTVNQTQVFKRPPLGVRKIVIATNIAETS
ITIDDIVHVIDGGKIKETNFDTQNNISTLTAEWVSLANAKQRKGRAGRVQPGKCYHLYNG
LRASLLDDYQLPEIMRTPLEELCLQIKILKLGRIASFLRKTLDPPSEQTVQLAITHLMDL
NALDKDEELTPLGVHLARMPVEPHIGKMILFGALLSCLDPVLTIAASLSFRDPFVIPLGK
EKIADTKRKQLAKNSKSDHLTIVNAFWGWEEAKRRSYKAERDYCWEYFLSSNTLQMLQNM
KGQFAEHLLAAGFVRSKNPKDPNSNINSDNEKLIKAVICAGLYPKVAKIRPSFSKKRKMV
KVYTKSDGKVNIHPKSVNAEETEFHYSWLIYHLKMKTSSIFLYDCTEVSPFSLLFFGGDI
SIQKDQDQDTIAVDEWIVFQSPAKTAHLVKDLKKELDALLQEKIKNPQPVDWNDTKSKDC
AVISAIIDLITTQESGASRNFAPRFGEGYYN
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atgagctatggatacggcagctggagaggccggcgagggggtcgcgggtccggcgaggac
agcggtgagcggtgggaccgcggagccgggtcaagcagagggggataccagagaaacccc
ggcggggaccaccgggaggacgaagactcgtttcggggacggcaccccagccacctgaaa
ggcagggagatcgggctgtggtacgccaagcgaggaggggtgaaaaggaaggaacaggag
agaaaatcgagagctgtggttcagatggatgaatcgcgagagcaccacatcacccaactc
ctcaactctgtccagactgacagcgccccaaaggaagcccgctcctctgcatctgaggcg
ccccagcctcacagagacagccagagggttttccgatctgatagtgctacacaaaaggat
actaaggaagtaaatgaccatgacttggaatacttattccaagacattgttcgagattct
agtcttgaccaacagctgaaaagagatctccagcgaaaaaaaacagatccaaagtacttg
gaaatgttgaaattcagggagaaacttccatcatattcaatgagaaaggagctggtggac
ctgataagagggaatcaggtggtggtggtcagcggagagacgggttgtggcaaaacgacg
caggtgactcagttcattctggacgactacatcgagagagagatgggatcgctgtgcagg
gtggtctgcactcagcccaggaggatcagtgctatttctgtggctgaaagagttgctgca
gaaagggcagaaaaatgtggagaaggaaactccagtggctatcagatcagactggattgc
cagttaccaaggaaacaaggctctatcttatattgtacaacaggcatcattttgcagtgg
ctgcggtcagattcacacctgtcgagcatcagtcacgtcgttctggacgaaattcacgag
agaaaccttcagtccgatgtgctgataaccatagtaaaagacctgctcgaactccgtgat
gatttgaagatcatcctgatgagtgccacattgaatgctgacaaattttccaaatatttc
gataaatgtcccatgattcacatccctggcttcacttttccagtgaaggagtacctgttg
gaagatgtagtggaaatgctgaggtaccgtccgcaggctcaggaccgccgtccgcagtgg
aagaagaggttcatgcagggccagcagttccggccggagaaggaggagaaggaggaggag
tacagggagacctggcccagttacgccagaagcctgcgagaccggtattcagacagcaca
atcgaggtcctagaaatgctggacgatgacgataaaattgacctgcccctcatcgtagaa
ttgatccggtacattgtcaggaacgatgaggacggagcaatactggtgttcttgcctggc
tgggacaacattagcacactaaacgatctcttgatggctcagcagatgtttaagtcagac
aactttatcatcattccactgcactccctgatgcccaccgtcaaccagacccaggttttt
aagagacctcctctgggcgttcgtaaaattgtgattgccactaacattgctgaaacaagc
atcaccatcgatgacattgttcacgtcatagacgggggcaaaataaaggagaccaacttt
gacactcagaacaacatcagcaccctgaccgctgagtgggtcagcctggccaatgctaaa
cagcgaaaaggccgtgctgggagggtacagcctggtaagtgttaccatctgtataatggg
ttgcgggccagccttctcgatgactatcagctgcctgaaattatgaggactcccctggag
gaactgtgcttgcagataaagatactaaagcttgggagaattgcatcattccttcggaaa
acactggatcctccttcggaacagacagtgcagttagcaattactcatttaatggatctg
aatgccttggataaggatgaggagttgactcctctcggtgttcacttggcgcggatgcca
gtggaacctcacatcgggaagatgatcctgttcggagcgctgttgagttgcctcgaccct
gtcctaactattgccgccagtctgagcttcagagatcccttcgtcattcctttgggcaag
gagaagattgcggatacgaagagaaagcagctggcgaagaattccaaaagtgaccacctg
acaattgtgaatgcattctggggctgggaagaagcaaagcgaaggagttacaaagctgag
agagactactgctgggagtactttctctcttcaaacacgctccagatgctgcaaaacatg
aagggccaatttgcagagcacttactggcagctggttttgtccgcagcaaaaaccctaag
gaccccaattccaatatcaactcggacaatgaaaagctgataaaagctgtcatttgcgct
ggattgtaccccaaggttgccaagatacgacctagtttcagcaagaaacgaaaaatggta
aaggtttatacgaaatccgatggcaaagtcaacatccatccgaagtctgtaaacgctgaa
gaaactgagttccactacagctggcttatctatcacctcaagatgaagacgagcagtatt
ttcctgtacgactgcacggaagtctccccgttttccttgctgttcttcggaggggacatc
tctatccagaaagaccaggaccaggacaccattgctgtggacgaatggatagtcttccag
tcccccgctaagacagcacatttagtaaaggatttaaagaaggaacttgatgctctcctg
caagagaagattaaaaatcctcagccagtagactggaatgacacaaaatccaaggactgt
gcagtcatatcagcgatcatagatctcatcacgacacaggagagtggggcgtctaggaac
tttgctcctagatttggtgaaggctactacaattaa
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