Lepisosteus oculatus (spotted gar): 102686793
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Entry
102686793 CDS
T07349
Name
(RefSeq) vimentin-like
KO
K07606
vimentin
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
102686793
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
loc03019
]
102686793
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
loc04812
]
102686793
04147 Exosome [BR:
loc04147
]
102686793
Messenger RNA biogenesis [BR:
loc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
102686793
Cytoskeleton proteins [BR:
loc04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
102686793
Exosome [BR:
loc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
102686793
Exosomal proteins of other cancer cells
102686793
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
TolA_bind_tri
DUF1664
YwqH-like
MdcG
Motif
Other DBs
NCBI-GeneID:
102686793
NCBI-ProteinID:
XP_015192237
Ensembl:
ENSLOCG00000001192
UniProt:
W5LZ24
LinkDB
All DBs
Position
LG25:2191385..2196296
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AA seq
430 aa
AA seq
DB search
MSSVTTRQSSYKRMFGGERSIAPSTSFSSRRYSSPIRSRVSYSMSAPPAIYATNTSRLRS
SATMPRLSTETSDFSLSDAVITDFKASKSNEMAEMQHLNDRFVSYIEKVCFLEQQNKILL
AELEQLQGKGISRVGDLYKEEMRELRGQVDQLTTDKARVEVMRDNLDDDLQRLREKIQDE
MRLREEAENNLQSFRQDVDHASLARLDLERKVESLQEEIAFLKKLHDEEVAELQAQIRHQ
HVQIDMDVVKPDLTVALRDVRTQYESLASKNIAEVEEWYKSKFADLTEAAARNNEALLQA
KQESTEYRRQVQALTCEVHALKGTNESLEHQMHEVEENFALESSRSQDTIAHLEVDIRNM
KDEMARHLRDYQDLLNIKMALDMEIATYRKLLEGEETRIATPGPMFSSLNLRGQAFVFVI
NVCGGGFVHW
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtgtaactacaaggcaatcttcctacaaaaggatgtttggtggggagagatct
atcgctcctagtacttctttctcaagccgccggtattccagtccgattcgatccagggta
tcctacagcatgtctgctccccccgccatctatgcgaccaacaccagtaggctccggtcc
agtgctacgatgcccaggctgtccacggaaacctcagacttttccttgtccgatgccgtt
ataaccgattttaaagctagtaagtccaacgagatggcggagatgcagcaccttaacgac
aggttcgtcagttatatcgagaaggtgtgctttctggagcagcagaacaagatcctgcta
gcggagctggagcagttgcagggcaagggcatctctcgcgttggagacctctataaagag
gagatgagagagcttcgtgggcaagtggaccagctcaccaccgacaaagccagggttgag
gtcatgcgtgataacctagatgatgatctccagaggctcagggagaaaatccaggatgaa
atgcgtcttcgagaggaagccgagaacaacctgcagagtttcagacaagatgttgaccat
gcgtctctggcccgtctggatctggagcgtaaggtggagtccctgcaggaggaaattgcc
tttttgaagaaactccatgatgaagaagtggctgagctgcaagcccagattcggcatcag
catgtccagattgacatggatgtggtcaaaccagacctcacagtagctctccgtgatgta
cgcacacagtatgaatctctagcatcgaagaacattgctgaagtggaagaatggtacaag
tccaagtttgcggaccttacggaggctgctgcccgtaataatgaagcccttctccaggcc
aaacaggagtccactgagtatcgccgacaggtgcaagctctcacctgtgaagtgcatgca
ctcaagggaactaatgagtctctggaacaccagatgcatgaggtggaggaaaactttgcc
ttggaatcctccagatcccaggacaccattgcccacttggaggttgacatccgcaacatg
aaagatgagatggcccgtcacctgcgcgactaccaggacctgcttaatataaagatggct
ctggacatggagatagctacctacagaaagcttctggagggagaggagacccggattgcc
accccaggtcccatgttttcctcactaaatctaagaggtcaggcatttgtttttgtaata
aatgtttgtgggggggggtttgttcactggtga
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