Lepisosteus oculatus (spotted gar): 102686797 Help Entry 102686797         CDS       T07349                                  Symbol ighmbp2 Name (RefSeq) DNA-binding protein SMUBP-2   KO K19036   ATP-dependent RNA/DNA helicase IGHMBP2 [EC:5.6.2.5 5.6.2.3] Organism loc  Lepisosteus oculatus (spotted gar) Brite KEGG Orthology (KO) [BR:loc00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03009 Ribosome biogenesis [BR:loc03009]     102686797 (ighmbp2)    03012 Translation factors [BR:loc03012]     102686797 (ighmbp2) Enzymes [BR:loc01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      102686797 (ighmbp2)     5.6.2.5  RNA 5'-3' helicase      102686797 (ighmbp2) Ribosome biogenesis [BR:loc03009]  Eukaryotic type   Other ribosome biogenesis factors    102686797 (ighmbp2) Translation factors [BR:loc03012]  Eukaryotic type   Initiation factors    Initiation associated factors     102686797 (ighmbp2) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AAA_12 SMUBP-2_HCS1_1B AAA_11 R3H zf-AN1 UvrD_C_2 C6_DPF Motif Other DBs NCBI-GeneID:  102686797 NCBI-ProteinID:  XP_006642620 Ensembl:  ENSLOCG00000001512 LinkDB All DBs Position LG27:3508822..3525232 Genome browser AA seq 945 aa AA seqDB search MAVETFVTRTLELLQEERAVEIEETRAWQESISLKELQRKGVCLLKLQIGRQKTGLYGRR LVTFEPGKYVGTGTLPSNTFGPGDIVGLYDSAGVNPSSQLVTGVVTRVTQVSISVAFDES QDSQNLEAEGPYNVLKLANDVTYKRLKNALNALKQYSSGPASTLIGVLFGYSEPSPPLQL TKILCCAPSNVAVDNLVERLVGYKVKVLRLGHPARLLESIQKHSLDAMLAHSDNTNIIAD IRKDIDQTYAKMKKTHEKSSQSHLRGEMKELRRELKQREETAITQILKGADVVLATNTGA SDDGPLKFLAGDHFDLAVIDECAQALESSCWIPLLKVPRCILAGDYKQLPPTIKSQTAGP GGLSRSLMERLIQKYGDPVVRMLTVQYRMNSAIMQWASQEMYDGRLTAHSSVENHLLRDL PGVQPTEETSCPLLLIDTAGCGLFEVEDEDEQSKGNQGEADIVALHIQTLTEAGVKAKDI GIITPYNLQVDMLRQRLSQKFPDLEIKSVDGFQGREKEAVVLSLVRSNRKGDVGFLSEDR RVNVAVTRARRQLVVVCDSQTVCHHAFLKALVDYIGEHGEVRTAFEYLEDVVPQNYSHEL SQGAQRGEIQTKESSKTQTTKKHTGKRKETENRKVQGQKQTAMNSVSTGKPNHRAKQDGD SSTPVEEEQKRKSYENLREKILEFLRDTEKASLDFPPSLTSHDRLLVHQISEELGLKHES TGEGKERHITVTRAGTQHTHAEAAGAKECRFLSSETLVKPSSEQGLQKDVDVAQVDLKAL HLERMQREQAKREEKIRQNKGQKAAQTPSSKKPKQSTKGKDCSQGQASAIVATSDDFDAL IDAVVKADSVCGFSKCKASVLTLGQMCSFCNRRYCLSHHIPEVHGCGDKAKAHARMRISR EGILYGGSGHKDRSIDPAKKAYLQRKLDRKLEDLATERKSKKKEK NT seq 2838 nt NT seq  +upstreamnt  +downstreamnt atggctgtggagacctttgtgaccagaacactagagcttctgcaggaggagagagcagtg gagattgaggaaacaagggcttggcaggagagcatttctttgaaggagcttcaacgcaag ggagtctgtctactgaaacttcaaataggtcgtcagaaaacaggcctgtatggacgacgc cttgtcacgtttgaacccgggaaatatgttggaactggtacgctgccaagcaacactttt gggcctggtgacatagtgggtctgtatgattcagcgggtgtgaatccatcatctcagctg gtcactggtgttgtgacgcgtgtgacccaggtttccatctctgtggctttcgatgaatct caggacagccagaacctggaggcagagggtccttacaatgtgttgaagctggccaatgat gtcacctataaacgactgaagaatgctttgaatgccctgaaacagtacagttctggtcca gcttccactctgataggggtcctgtttggctattcagagcccagtcctccacttcagctg acaaagattctttgctgtgccccttccaacgttgctgtggacaacctggttgaacgcctg gtggggtataaagtaaaagttctgcgtctcggacaccctgctcggctcctggagtcgatc cagaagcattctctagatgctatgctggcgcacagtgacaacaccaatataattgcagac atcaggaaagatatcgaccagacttatgcgaaaatgaagaaaacgcacgagaagagcagt cagagccatttgagaggagagatgaaagagctgcgccgagagctgaaacagagggaagag acggcaatcacacagatcctcaagggtgctgacgtagttctggccactaatactggtgcc agtgacgatggtcccctgaagtttcttgcaggagatcattttgacctggctgtgatcgat gagtgtgcccaagccctggagagcagctgttggatccccctgctgaaggtgccccggtgc atcctggctggagactacaaacagcttcctcccaccattaaatcccagacagctggcccc ggaggcctctctcggagtctgatggagaggctgattcagaagtatggagacccggtagtg aggatgctgacagtgcagtaccgcatgaacagtgcaataatgcagtgggcctcccaggaa atgtatgatggaagactgactgctcactcctccgtggaaaatcaccttctgagggatctg ccaggggtgcaacccactgaagagaccagctgtcctctcctgctgattgacactgctggc tgtgggctgttcgaggtggaggatgaagatgaacaatctaaaggcaatcaaggggaagct gatattgtggcacttcatatacaaactctgactgaggctggtgtcaaagcaaaagacata ggcatcattaccccctacaatctgcaggtggacatgctcagacaacggctttctcagaag tttccagacctggaaatcaaatccgtggacggcttccaaggcagggaaaaggaggcggtg gtgctttcgttagtcaggtcaaacagaaagggggatgttgggtttttgtccgaggacaga agggtcaatgtagccgtaacccgtgctagacgccagctggtagtggtgtgtgactcacaa actgtttgccatcatgctttcctgaaggctcttgtggactacataggcgagcatggggag gtacggacagcttttgagtatctcgaggacgtagttcctcagaattactcccatgagctc tctcaaggtgcacaaagaggagaaatacagaccaaagagtcttctaagactcagactact aagaaacatacgggaaagagaaaggaaacagaaaacagaaaggtccaaggccaaaagcaa acagcgatgaacagtgtgagtaccggaaaaccaaatcatcgtgctaaacaggatggtgac tcgtccacacctgtggaagaagagcaaaagagaaagagctatgagaatctaagagagaaa atactagagtttttgagggacacagaaaaggcttcactagattttccaccatccttaacc tcacatgaccgcctgctggtacaccagatctctgaggagctgggcttaaagcatgagagt acaggagaagggaaggaaagacacatcactgtcaccagagcagggactcagcacacacac gcagaggctgctggggcaaaggagtgccgtttcctatcctccgagacccttgtcaagcca tcgagcgagcagggtttgcagaaggacgtagacgtggcacaagtagatctgaaggcattg cacttggaacgaatgcagcgagagcaggctaaaagggaagagaagattcggcagaacaaa ggtcagaaagctgcacaaactccgtcttcaaagaagcccaaacagtccaccaaaggaaag gactgctctcagggccaggcctcagccattgttgctaccagtgacgatttcgatgctctc atagatgctgttgtgaaagcagacagtgtctgtggattctccaagtgtaaggccagtgta ctgacattggggcagatgtgttctttctgtaacaggcgatactgtctgagtcaccacatc ccagaggttcatggatgtggtgacaaagcaaaggcacacgctcgtatgaggatcagccgt gagggcattctgtatgggggtagcgggcacaaagacaggtccatcgacccagccaagaaa gcctacctgcagaggaaactagacaggaaactagaagatctggccaccgagcggaaaagt aaaaagaaggaaaaatga

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