Lepisosteus oculatus (spotted gar): 102686876
Help
Entry
102686876 CDS
T07349
Symbol
mms19
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X2
KO
K15075
DNA repair/transcription protein MET18/MMS19
Organism
loc
Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
loc03036
]
102686876 (mms19)
03400 DNA repair and recombination proteins [BR:
loc03400
]
102686876 (mms19)
Chromosome and associated proteins [BR:
loc03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
102686876 (mms19)
DNA repair and recombination proteins [BR:
loc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
102686876 (mms19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMS19_C
MMS19_N
HEAT_EF3_N
Motif
Other DBs
NCBI-GeneID:
102686876
NCBI-ProteinID:
XP_006630368
Ensembl:
ENSLOCG00000003810
LinkDB
All DBs
Position
LG5:complement(4513616..4533329)
Genome browser
AA seq
1025 aa
AA seq
DB search
MMAANGAVLLGLVEEFVSGQQDSKAAETATGVKTGLFTILELVEALGWSLTSCEPRVRAR
GVQLLSWVLQECCGSLSEKEAEVLTVFYENRLKDHYVITPHVLQGIKALTQSPALPPGLA
VSILKSLFQDIHVQSLMQAERSCVYSILLNLMESREEELKKLGADFVFGFVQAIDGEKDP
RNLLLAFQIARNILHRGYELGLFAEELFEVTSCYFPIDFSPPPNDPHGVTREQLVLALRE
VLSGTPSFAEFLLPLLIEKLDSDVQSAKLDSLQTLTACTSVYGHRELKDFLPGLWSSLRR
EVFQTASEKVESAGLSALHSLTACLSHSILDSDSEDSLHGFLDLILKDCQHHLCEPDMKL
VWPSAKLLQAAASASYRASYKITAVVMPLLLEQYNSHTQNAQRRTLLEVLQGFTQRAQGS
SPEEGDESVLSGFRQPLCSLVFSALTESSPALQATASRVLTALGLQPGLLSESDIQLAAD
HLTRLILREEDQQSCSAAMESAGSLAALYPAAFAARMVPQLKEEIFSEPTEDRSAGRSQQ
AVRQRGMKALAAISSRHSLIQESVPVLLQVLCSAHAGSGSFCAEEVVSACQSLQQIVEQS
QDSEETSRFFHHTVIPQLLGLAVQAALRGGDSTTPRSCLTEERVLSAMAPVVSQACSRLH
SELAARTASMAVSFFLDGDLTFLPENNFPKHLQLLNKQPDGWLQSQLVCLLMACVCSLPR
SVEVPQIDRLLSQLEELSCTCTHPFSYTSAAKCFAGLVNKHPAGEHLDLLLQKLVKRIDS
ELDRASSPFRVQTFTLLLWVAKALLLRYHPLSTTLTDKLLSLLTDSELGPRAADGFSLLM
TDSVDVLSRACHAHVHIMYRQRFFTENSPKLVQGFNSSPKETKSCYLKALSHMVTSLPRQ
VQLSELPTLLPLLLEALSCPDRGVQLSTLSCLHPLLLDLPQALTLHLDTLVSRLRALTTS
SAMNVRISALRCLHALTRLPDHLVLPFRLGVLRALAVPLDDKKRLVRREAVLARGEWFLL
GSPGR
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgatggccgcgaatggagctgtgttgctgggtttggtagaggaattcgtatcgggccag
caggacagcaaggctgctgagactgcaacaggagtgaaaaccggactgtttaccatattg
gaactggtggaggccttgggctggagcctgacaagctgcgagccccgggttcgggcgcgg
ggggtgcagctgctctcgtgggtgctgcaggagtgctgcggcagcctctcggagaaggag
gctgaagtcctgacagtcttttacgaaaacagactgaaagatcattatgtcataacgccg
cacgtgttacaaggcattaaagcgctgactcagagccctgcactgccccctggtctggct
gtgtccatcctgaagtctctcttccaggacatccatgtacagtccctgatgcaggcggag
cgctcctgtgtctacagcatcctgttgaacctgatggagtcgcgagaggaagagctgaag
aagttaggtgcagactttgtcttcggttttgttcaagcaattgatggtgagaaagacccc
cgcaacctccttctggcctttcagatcgcaaggaacatcctgcacaggggctacgagctg
gggctgtttgcagaggagctgtttgaagtgacttcctgctattttccaatagacttcagc
ccaccccctaatgaccctcacggagtcacccgcgagcagctggtcctggcgctcagggag
gtgctgtccggcacgccgagctttgcagagtttctgctgccgctgctcatcgagaagctg
gactcggacgtgcagagtgccaagctggactccctgcagacactgactgcctgcacctcg
gtttatgggcaccgtgagttgaaggacttcctaccaggcctctggtcttccctgcgcaga
gaggtattccagaccgctagcgagaaagtggagagcgcggggctgtctgctcttcacagc
ctcacggcctgtctctcccactccatcctggactccgactcggaggactccctgcacggc
ttcctcgacctcattcttaaagactgccagcaccacctgtgcgagccagacatgaagctg
gtgtggcccagtgccaaactcttgcaagcggcagccagcgcctcttacagggcaagctac
aaaattacagcggtcgtcatgcctttattgctggagcagtacaacagtcacacgcagaat
gctcagcggcgcaccctgctggaggtattgcaaggattcacccaacgagcccagggcagc
tccccagaggagggggacgagagcgtgctgtcaggcttccgccagcccctgtgcagcctg
gtgttctccgccctgacggagtccagtccagccctccaggccactgcctcccgtgtgctg
acggccctgggcttgcagccaggcttgctttcggagtcggatatccagctggccgctgat
caccttaccaggctgatccttagggaagaggaccagcagagctgttcagctgcaatggag
tctgcgggctccctggctgctctgtaccctgctgccttcgccgccaggatggtccctcag
ctgaaggaggagatcttctcagagccaacggaggatcggtcagctgggagatcccagcag
gccgtgcgacagcgtgggatgaaggcgttggcagccatttcgtctcggcatagcctcatc
caggagagcgtgccggtattgctgcaggtcctctgctccgcccacgcaggcagcggctct
ttctgtgcggaggaggtcgtgtctgcttgtcagagcctgcagcagatcgttgagcagtcc
caggactcggaggagaccagccgcttcttccaccacactgtcatccctcagctgctgggg
ctggcggtccaggcagcgctgcgcggcggagattccacgaccccccgcagctgcctgacg
gaggagagggtgctctccgcgatggcgccggtggtcagccaagcctgcagccgcctgcac
tcagagctggctgcccgcactgcctcgatggccgtgtccttcttcctggacggagacttg
actttcctgcccgagaacaacttccccaagcacctgcagctgttgaataagcagcccgac
ggctggctgcagtcccagctggtctgcctgctgatggcctgtgtctgctctctgcccagg
agtgtggaggttccccagattgacagacttctgagccaactggaggagctgagctgtacc
tgtacccaccccttttcctacacctccgcagcaaagtgctttgctggactggttaacaag
catcctgcaggagagcatctggacctgttgctgcagaagctggtgaagaggattgattct
gagctggaccgcgcctcctctcccttccgagttcagaccttcactctgctgctctgggtg
gccaaggcccttctgctccgataccaccctctctcgacaactttgaccgacaagctgctg
tccctgctgacggactcggagctgggcccccgggcggctgatggcttctctctgctgatg
acggactccgtggacgtgctgagccgcgcctgtcacgcccacgtgcacatcatgtaccgc
cagagattcttcaccgagaactcgcccaagcttgtccagggattcaactcctcacccaaa
gagacgaagtcctgctacctgaaggccttgtcccacatggtgaccagcctgcccagacag
gtgcagctcagcgagcttcccacgctcttgcccctcctcctggaggctctctcttgcccc
gaccggggggtgcagctgtccacactgtcctgcctacacccgctgctcctagacctgccc
caggccctgaccctgcacctggacactctggtctcccgcctgcgggccctcaccaccagc
tccgccatgaacgtccggatctcagctctgcgctgcctgcacgccctgacccggctcccg
gaccacctggtgctgccgttccgactgggggttctgcgtgccctggccgtgcccctggat
gacaagaagaggctggtgaggagagaggcggtgctggcacgaggagagtggttcctgctg
ggaagcccggggaggtga
DBGET
integrated database retrieval system
