KEGG   Lepisosteus oculatus (spotted gar): 102686899
Entry
102686899         CDS       T07349                                 
Symbol
cul4a
Name
(RefSeq) cullin-4A isoform X1
  KO
K10609  cullin 4
Organism
loc  Lepisosteus oculatus (spotted gar)
Pathway
loc03420  Nucleotide excision repair
loc04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:loc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    102686899 (cul4a)
  09124 Replication and repair
   03420 Nucleotide excision repair
    102686899 (cul4a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:loc04121]
    102686899 (cul4a)
   03400 DNA repair and recombination proteins [BR:loc03400]
    102686899 (cul4a)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:loc04147]
    102686899 (cul4a)
Ubiquitin system [BR:loc04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     102686899 (cul4a)
DNA repair and recombination proteins [BR:loc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      102686899 (cul4a)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      102686899 (cul4a)
Exosome [BR:loc04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   102686899 (cul4a)
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 Enkurin
Other DBs
NCBI-GeneID: 102686899
NCBI-ProteinID: XP_006639256
Ensembl: ENSLOCG00000009814
UniProt: W5MUF3
LinkDB
Position
LG17:27296288..27322323
AA seq 755 aa
MAEDIRHSTKANFSALAEHTNGLTKTSTLASKPGASKKLVIKNFKDRPKLSETYTQETWL
KLQEAVGAIQNSTSIKYNLEELYQAVENLCSYKVSPTLYKQLRQVCEGHVKAQIHQFRED
SLDYVSFLKRMNKCWQDHCRQMIMIRSIFLFLDRTYVLQNSILPSIWDMGLELFRTHIVS
DRLVQSRTADGILELVERERGGEAVDRSLLRSLLGMLSDLQVYKDSFEQKFLKETNRLYA
AEGQRLMQEREVPEYLHHVKRRLEEENDRVITYLDQSTQKQLISTVEKQLLGEHLTAILQ
KGLDSLLNENRIGELTLLYQLYGKVKGGLPALLQHWKEFIKNFGVTIVATPEKDKDMVQD
LLDFKDKIDRITESCFQKNESFVNSMKESFETFINKRPNKPAELIAKYVDSKLRAGNKEA
TEEELERILDKIMIIFRFIHGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECG
AAFTSKLEGMFKDMELSKDIMIQFKQYMQNQSDPGNIELTVNILTMGYWPTYTPMEVHLP
AEMVKLQEVFKTFYLGKHSGRKLQWQPTLGHAVLKSEFKEGKKEVQVSLFQTLVLLMFNE
GDEFTLEDIRSATGIEDSELRRTLQSLACGKARVLLKDPKGKDVEDGDRFLFNGDFKHKL
FRIKINQIQMKETVEEQVSTTERVFQDRQYQIDAAIVRIMKMRKTLSHTLLVSELYNQLK
FPVKPGDLKKRIESLIDRDYMERDKDTPNQYHYVA
NT seq 2268 nt   +upstreamnt  +downstreamnt
atggcagaagacatccgccacagcacgaaggcaaacttctccgcgctggccgagcacacc
aacggcctcactaaaacttccacgctcgcctccaaaccgggggcctccaagaaactagtc
attaaaaacttcaaagatagaccaaagctctcagaaacctacactcaggaaacatggctg
aaacttcaggaagctgtcggagccatacagaacagcacttccattaagtacaacctcgag
gagctctatcaggcagtggagaacctgtgttcttataaagtgtctcctacgctctacaaa
cagctcaggcaggtgtgtgaaggtcatgtcaaagcacagatccatcagttcagagaagat
tctttggactatgtttcttttctaaaaaggatgaataaatgttggcaggatcactgtagg
caaatgatcatgataaggagcattttcttgtttttggatcgaacatatgtgctgcagaac
tccattttaccatccatttgggacatggggctggagctcttcaggacccacatcgtcagc
gaccggctggtccagagccggacggcggacggcatcctggagctggtggagcgggagcgc
ggcggcgaggccgtggacaggagcctgctgcgcagcctgctgggcatgctgtcggacctg
caggtgtacaaggattcgtttgagcagaaattcctgaaggaaacaaatcgtttgtacgca
gcagagggccaaagattaatgcaggagagagaggtgccggagtatctgcaccacgtcaag
aggcgcctggaggaagagaacgaccgagtgattacatacctggatcagagcacacagaag
cagctcatttctactgtggagaagcagctgcttggtgaacatttgacagccattttacag
aaaggtctggacagcctgctgaatgagaacaggatcggcgagctcaccctgctctatcag
ctctacggcaaggtgaaggggggcctccctgcgctgctgcagcactggaaggagttcatc
aagaactttggggttaccattgtggccaccccggagaaggacaaggacatggtgcaggac
ctgctggacttcaaagacaagatcgaccgcatcaccgagagctgcttccagaagaacgag
tccttcgtcaattccatgaaggagtcctttgagaccttcatcaacaagaggcccaacaag
cctgcggagctcatagccaagtatgtggattcgaagctgcgcgctgggaataaggaagcc
acggaggaggagctcgagagaatcctggataaaatcatgatcatcttcaggttcattcac
ggaaaagatgtgttcgaggcgttttacaagaaggaccttgcgaaacgcctgctggtggga
aagagcgcttcagtagatgctgagaaatccatgctgtccaagttgaaacatgaatgtggg
gcggccttcaccagcaagctggaggggatgttcaaggacatggagctgtccaaagacata
atgatccagttcaaacagtacatgcaaaaccagagtgacccgggcaacatcgagctcacc
gtgaacattctcacgatgggctactggccgacgtacacccccatggaggtgcatcttcct
gcggagatggtgaagctccaggaggtgttcaagacgttctacctggggaagcacagcggc
cgcaagctgcagtggcagcccaccctcggccacgccgtcctcaagtcggagtttaaggag
gggaagaaggaggtgcaggtttcactgttccagacactggtcctgctcatgttcaacgaa
ggggatgagttcactctggaagacatcagatctgccactggaatagaggacagcgagttg
cggaggacgctgcagtctctggcctgtgggaaagcccgggtgctcctcaaagaccccaag
ggcaaagacgtggaggacggagacaggttccttttcaacggcgacttcaagcacaagctg
ttcaggataaagatcaaccagatccagatgaaggagaccgtggaggagcaagtgagcacc
accgagcgcgtgttccaggacaggcagtaccagatcgacgccgccatcgtccgcatcatg
aagatgaggaagacgctgagccacaccctgctggtgtcggagctctacaaccagctcaag
ttcccggtcaagcctggagacctgaagaagaggatcgagtctctcatcgaccgggactac
atggagagggataaggacactcccaaccagtaccactacgtggcgtaa

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