Lepisosteus oculatus (spotted gar): 102686923
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Entry
102686923 CDS
T07349
Symbol
ttc37
Name
(RefSeq) tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102686923 (ttc37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
loc03019
]
102686923 (ttc37)
Messenger RNA biogenesis [BR:
loc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
102686923 (ttc37)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_8
TPR_11
TPR_CcmH_CycH
TPR_14
TPR_16
TPR_17
TPR_12
ANAPC3
ARM_TT21_C
TPR_9
Fis1_TPR_C
TPR_30
COG4_N
Motif
Other DBs
NCBI-GeneID:
102686923
NCBI-ProteinID:
XP_015215712
Ensembl:
ENSLOCG00000001504
LinkDB
All DBs
Position
LG2:975943..1027586
Genome browser
AA seq
1521 aa
AA seq
DB search
MSNKEVKSALKSAREAIKNKEYKEALKHCKAVLKLEKNNYNAWVFIGVAAAELEQPEQAQ
TAYRKAAELEPEQLLAWQGLASLYEKSNQTDFKAELPKVYQKLLAHYESSDRQKWYEVCR
KLVEIYRLEKQHLEVARLWHKLVQLKQEEGVGGQELLQLWQQMTQLLAARLQEQDNETQQ
LLITAFENATSLAEKIQSEEHQKLLTEYIECLSKLPHEEAKMKGACESMMSLYPSSTFPL
EVLSTHFIQSGVCGEEAARCFARLAQRDSDSGPALVGLGLSALREQKYEEAVRNLAQGLK
QMRSSTSGWFHLAQAQLKMHRYSDSIVSCNQALSSSGGEEEWTLQLLRLKTEALVRSGGE
QSAQEALDTLAQISDADNDPVLLALKGRIYLQKGQVEQALQVAADLLASHPGQAEGHALN
GHIRLSQEDYAQAERSFQKAVELSPESGEYYLNLGLLYWRMGEDTRRDKSKAHTCLLKAA
KLDARLGPAFRCLGHFYRDVAQDRARARGCYRKAFDLDGGDAEAGAAAVDLLMELGDMES
ALAILKSVTERAGAGVAKWAWLRRGLYSLKMNQHAQAIADLQAALRAEPLDAVCWECLGD
AYLNRRSFTAALRAFSKAQELRPQSIYSLYQVAAIKQTLGKCKEATGEYMQIIQRREEYV
PALKGLGECYLSMARAAMETFLDARAVDYIELAVEYLFRAAQLRPDLSCLWKLLGDACSA
VHAVSPTRARIAVPGLLCGLAAGGQKHTLHKAAILSLGGRCYARALKLMAEAANLWCDLG
LNYFRQAQHLLPEEGSESPELLEKSVQCIKKAVMLDSKNHLYWNVLGVVVMSKGMLAHEA
FKVAQSLEPLYVSCWIGQALIAETVGSYETMDLFRHTTELSTHTEGVKGYGHWVCSTLLD
KTNRKSELYRYNIVQMNAISAAQLALCKYTERVQTDAAAFTMLGYLNEHLQLKQQAAQAY
QRAVELLQSSAQTEELSFAHRNLGRSLCTTGQYRRAVEAYESTPLTELQDIAGLALACFR
RGLLQESIRAYERALSAAGTEKEKAYILTALALLQHRLGNKDSAKTLLFKCSVLKEPCTE
SLLSLCALGLVSRDATLATAALGELLKHAGPAEAVQERGLLTCALLALQGNSAGVQRQAA
RAVHSNPGDAALWALLSRLVPQYNPRNAKGGAAAGGVACHFSMTQGKRALLYSGVNQLAS
GRHSGEDPSRNALKTIQRAALLCPDDPAVWAALLAACHTENVASCLRGTAPSRTGLEGAL
LTLVSEKVPSAQAAPRGLESWCLQQAVSGLKQVGRRADAEALCTKALGADPEQPAVFLLL
RQVQCEQLLLSRSQLPDRVLEELQKAVQANRSSVPAWHWLAEVYRTQGLLVQAVMSYRQG
LQVASQLGLFSGKLASLLHLALLALGPCMAEVSSSEWKDLVQEAIGEALKLASCPLALLL
QALLQFSRKMGARETRKLLERVVYTPGYPESITSVASWYLLRHLHAKNDQELMDTLMDHA
RALGDSRLEDLHRQLCSASAH
NT seq
4566 nt
NT seq
+upstream
nt +downstream
nt
atgtctaacaaagaggtgaaatcggccttgaaaagcgccagagaagccataaaaaataaa
gaatacaaagaggccttgaaacactgcaaggctgtcctgaagctggagaagaacaactac
aacgcctgggtgttcatcggggtggcagcagctgagctggagcagcccgagcaggcgcag
acggcctacaggaaggcggcggagctggagcccgagcagctgctggcctggcagggtttg
gcaagcctttatgagaaaagtaaccaaactgatttcaaagctgaactaccaaaggtctat
cagaagctcctcgcccactatgaaagctcggacagacagaagtggtacgaggtgtgcagg
aagctggtggagatctaccgcctggagaagcagcacttggaggtggccaggctgtggcac
aagctggtgcagctgaagcaggaggagggcgtgggcggccaggagctgctgcagctgtgg
cagcagatgacccagctgttggcagcccgtctgcaggaacaggacaacgagacccagcag
ctgttgataacagcttttgaaaatgccacgagtttggcagagaagattcagagcgaagaa
catcaaaagcttctgactgaatacattgagtgcttgtcaaagctgccacacgaagaggca
aaaatgaagggcgcctgcgagtcgatgatgtctctgtaccccagctcgacgttccctctg
gaggtgctcagcacgcacttcatccagtcaggcgtgtgcggcgaggaggcggcgcgctgc
ttcgcgaggctggcgcagcgggactccgacagcggcccggctctcgtcgggctggggctc
agcgctctgcgggagcagaagtacgaggaggcggtccggaacctggctcagggactcaag
cagatgcgctccagcaccagtggctggtttcaccttgcacaagcgcagctgaaaatgcac
cggtactcggacagcatcgtttcctgcaaccaagccctgagcagcagtggaggggaggag
gagtggacactgcagctgctgcggctcaagacggaagccctggtgcggagcggaggggag
cagtctgcgcaggaggccctcgacacgctggcacagatttcagatgcagacaatgatcct
gtccttctggctctaaagggaagaatttatttgcagaaagggcaagttgagcaagcactt
caggtggcggctgatctcctggcttcgcaccccgggcaggcagagggccatgcgctgaac
ggacacatccgcctctcccaggaggactacgcgcaggccgagcgcagctttcagaaggca
gtggagctcagcccggagtcgggggagtactacctcaacctggggctgctgtactggcgc
atgggagaggacacccggagagacaagagcaaggcgcacacgtgtctgctgaaggccgcg
aagctggacgctcgcctggggccggcgttccgctgcctggggcacttctaccgcgacgtg
gcgcaggacagggcccgcgcgcggggctgctacaggaaggccttcgacctggacggcggg
gacgcggaggccggggcggcggctgtggacctgctgatggagctgggggacatggagtcc
gccctcgccatcctgaagtccgtgacggagcgggccggcgccggcgtggccaagtgggcg
tggctcaggcgcggcctgtacagcctgaagatgaaccagcacgctcaggccatcgcagac
ctgcaggcggcgctgagagccgagcccctggacgcggtgtgctgggagtgcctgggcgac
gcctacctgaaccgcaggagcttcacggcggcgctcagggccttcagcaaggctcaggag
ctgcggccccagtccatctacagcctgtaccaggtggccgccatcaagcagacgctgggc
aagtgcaaggaggcgacgggcgagtacatgcagatcatccagaggcgggaggagtacgtc
ccagcgctgaagggcctgggcgagtgctacctgtcgatggcgcgagctgcgatggagacg
tttctcgatgccagagcggtggactacatcgagctggctgtagagtacctcttcagggcg
gcccagctgcgccccgacctgtcctgcctctggaagctgctgggagacgcgtgcagcgct
gtccatgccgtgtcccccaccagggcccgcatcgccgtgccgggcctgctctgtgggctc
gcagccggcggccagaagcacacgctccacaaggccgccatcctcagcctgggaggccgg
tgctacgcccgcgcgctgaagctgatggcagaggctgctaacctgtggtgtgacctcggc
ctgaactacttccgtcaggctcagcacctgctgcccgaggagggaagcgagagcccggag
ctgctggagaagtccgtacagtgcattaaaaaagcagtgatgctggacagcaagaatcac
ctgtactggaatgtgcttggagtggttgtcatgagcaaaggtatgctcgctcacgaagcc
ttcaaggtcgcccagtctctggagcccctgtatgtcagctgctggattggacaggccctc
attgcagagaccgtcgggagctacgaaaccatggatctcttccggcacacaacggagctc
agcacccataccgaaggggtgaaagggtacgggcactgggtgtgctccacgctgctggac
aaaaccaacaggaagtccgaactataccgctacaacatcgtgcagatgaacgccatttct
gcagctcagctcgcgctgtgcaaatacacagagcgagtgcagacagacgcagctgccttc
accatgctgggatatctgaatgaacacctgcagctcaagcagcaggctgcccaggcgtac
cagagggctgtggagctgctgcagtcctcagcgcagacagaagagctgagctttgctcac
aggaacctgggcaggagcctctgcaccacgggtcagtaccgccgggctgtggaggcctac
gagtccacgccgctgaccgagctgcaggacatcgccgggctggcactggcctgcttcagg
cgtggcctcctgcaggagagcatcagagcctacgagagagctctgtcggcggcgggcact
gagaaggagaaggcctacatcctgacagccctggccctgctgcagcaccggctgggcaac
aaggacagcgccaagaccctgctcttcaagtgctccgtgctgaaggagccctgcacagag
agcctgctctcgctctgcgccctgggcctggtcagccgcgacgccacgctggccaccgcg
gccctgggcgagctcctgaagcacgccggcccggcagaggcggtgcaggagcgcggcctg
ctcacctgcgccctcctcgctctgcaggggaacagcgcgggcgtgcagaggcaagcggcg
agggccgtccacagtaaccccggagacgccgccctgtgggcactgctgtcccggctggtt
cctcagtacaaccccaggaatgccaagggaggggcagcagctggaggagtggcctgccat
ttcagcatgacccaggggaagagggcgctgttgtacagtggcgtgaaccagctggcttct
ggcaggcactcgggagaagaccccagcaggaacgcgctgaagaccatccagagggcagcc
ctgctgtgcccagatgacccggctgtctgggctgctctgctggccgcgtgccacacggag
aacgtcgccagctgtctccgaggcacagcccctagccggaccggcctggagggggcgctc
ctgacgctggtgtctgaaaaagtgccgtccgcgcaggccgcgccccgaggcctggagagc
tggtgtctgcagcaggccgtgtcggggctcaagcaggtgggccgccgcgcggacgccgag
gccctgtgcactaaggccctgggcgcggaccccgagcagccggcagtcttcctcctgctg
cggcaggtccagtgtgagcagctgctgctgtcccgctcccagctgccggacagggtgctg
gaggagctccagaaggcagtgcaggccaaccgcagctcggtgcccgcctggcactggctg
gcggaggtgtacaggacgcagggcctcctggtgcaggctgtgatgagctaccggcaaggc
ctgcaggtggcgtcgcagctggggctcttcagcgggaagctggccagcctgctgcacctg
gcgctgctggccctcggcccctgcatggccgaagtgtcgagcagcgagtggaaggatttg
gtccaggaggccattggtgaagccctgaagctggcctcctgccccttggccctcctgctc
caggccctgctgcagttctccaggaagatgggggccagggagactcgcaagctgttggag
agagtggtttacacgcccgggtaccccgagtccatcacctccgtggccagctggtatctc
ctgaggcacctgcacgccaagaatgaccaggagctcatggacacgctgatggaccacgcc
agagctctgggggactccaggctggaggaccttcacaggcagctttgctctgcctctgcc
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