Lepisosteus oculatus (spotted gar): 102686938
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Entry
102686938 CDS
T07349
Symbol
dhx15
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102686938 (dhx15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
loc03041
]
102686938 (dhx15)
03009 Ribosome biogenesis [BR:
loc03009
]
102686938 (dhx15)
Enzymes [BR:
loc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
102686938 (dhx15)
Spliceosome [BR:
loc03041
]
Complex A
U2 snRNP components
U2 related factors
102686938 (dhx15)
Complex B
102686938 (dhx15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
102686938 (dhx15)
Ribosome biogenesis [BR:
loc03009
]
Eukaryotic type
90S particles
Helicases
102686938 (dhx15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
SRP54
nSTAND3
Flavi_DEAD
AAA_25
AAA_29
DUF3915
AAA_7
Atrophin-1
Apis_Csd
Motif
Other DBs
NCBI-GeneID:
102686938
NCBI-ProteinID:
XP_006629881
Ensembl:
ENSLOCG00000012339
UniProt:
W5N3I5
LinkDB
All DBs
Position
LG4:53748233..53787945
Genome browser
AA seq
764 aa
AA seq
DB search
MSKRHRLDLGDDYSSNKKRSSSDLKDRDRDRDRDDRSKDRERDRDRDRDRDREKDIKMPG
ISLNPVMAVGSMPALRQSVVHQQINPFTNLPHTPRYYEILKKRLQLPVWEYKERFNDILT
RNQSFVLVGETGSGKTTQIPQWCVDMVRALPGPKRGVACTQPRRVAAMSVAQRVADEMDV
MLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDI
LMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDY
LEAAIRTVIQIHMCEEEEGDVLLFLTGQEEIDEACKRIKREIDDLGPEVGDIKIIPLYST
LPPQQQQRIFEPPPPKKPSGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRI
RVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVV
LQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQL
AKMVIASCEFNCSNEILSITAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVY
HAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTEFTSRDYYINIRR
ALVTGFFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCT
DIKPEWLVKIAPQYYDMGNFPQCEAKRQLERIIAKLQTKEYSQY
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaaggcatcggttggatttaggcgacgactattcttctaacaaaaaaagatcg
tcctctgacttgaaagatcgagaccgcgacagagatcgtgacgaccgatcgaaggacagg
gaacgcgacagagaccgagatcgagaccgggacagagaaaaggacattaagatgcctggc
atctctctcaatcctgtgatggcagttggtagtatgcctgctctaaggcagtccgtagtt
catcaacagattaaccccttcaccaatctccctcacactcctcgatactatgagatcctg
aagaagaggctccagcttcctgtgtgggagtataaggaacggtttaatgacattctcaca
agaaatcaaagctttgtattggttggtgaaacaggttctggaaaaacaacacagattccc
cagtggtgtgtcgatatggtccgtgcccttcctggaccgaaacgaggagttgcctgtacc
cagcccagaagagtggctgcaatgagcgtggcccagagagtcgcagatgaaatggatgtg
atgctgggccaggaagttggatactccattcgatttgaagactgcagcagtgcaaagact
atattaaaatacatgaccgatggtatgttactccgagaagcaatgaatgacccacttctg
gaacgttacggcgttatcatccttgatgaagcccatgagcgtactcttgctacagacatt
ttaatgggagtcttaaaagaagttgtaagacaaagatcagatttgaaggttattgttatg
agcgccacattggatgctgggaaatttcagatttattttgacaactgtcccttgctcacc
attcccggtcgtacacaccctgtggaaatcttctacacaccagaaccggagcgagactat
ttagaagcagctatccgtactgtaatacaaatccacatgtgtgaggaggaagaaggagat
gtcctgctgtttcttacaggacaagaggaaattgatgaagcttgtaaaaggataaaacga
gaaatagatgacttgggacccgaagttggggacattaaaatcattccactgtattccacc
ctaccaccacaacagcagcaacgaatctttgaacctccgcctccaaaaaagccaagcgga
gcaataggaaggaaggttgtagtgtcaacaaatattgctgaaacttccctgacaattgat
ggtgttgtgtttgtaattgatcctggatttgctaagcaaaaggtatacaatcctcggatc
agagtggagtccttgctggtgacggcgattagcaaagcatctgcccagcagagagctggc
cgtgctggcaggacgcgcccagggaagtgtttccgcttgtacaccgagaaagcctacaag
actgagatgcaggataacacataccctgaaattttaaggtctaacttgggctctgttgtg
ctacaactaaagaaacttgggattgatgacttggttcattttgacttcatggacccacca
gcacccgaaactttgatgagagccttggaactcttgaattatctagccgccttgaatgat
gatggtgatctgacagagttgggatcaatgatggcagaatttcctctggatccacagctg
gccaagatggtcattgcgagttgtgaatttaattgttccaatgagatcctctctattaca
gcaatgctgtcagtcccacagtgttttgttcgtccgacggaggctaagaaagctgctgat
gaggccaagatgaggtttgcgcacatagatggagatcatttgacactactgaacgtctac
catgctttcaaacaaaaccatgagtctgttcagtggtgttacgacaacttcataaactac
agatcactgatgtcggctgacaatgtacgtcagcagctgtccagaataatggacagattc
aacctgcctcgcagaagcacagaattcacaagtcgagattactatatcaacatacgacgg
gcattggtgactggcttcttcatgcaggtggcacacctggagaggacagggcattaccta
acagtgaaggacaaccaggtggtacagcttcacccctctactgtcttggatcacaaacca
gagtgggtgctctacaatgagtttgtactcaccacgaagaactacatccgtacatgcact
gatataaaaccagaatggttagtaaaaatagccccccagtactatgacatgggcaacttc
ccacagtgtgaagcaaaacgacagttggagcgcatcattgccaaacttcaaaccaaggaa
tattcccagtactga
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