KEGG   Lepisosteus oculatus (spotted gar): 102686954
Entry
102686954         CDS       T07349                                 
Symbol
vps18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
  KO
K20181  vacuolar protein sorting-associated protein 18
Organism
loc  Lepisosteus oculatus (spotted gar)
Pathway
loc04140  Autophagy - animal
loc04142  Lysosome biogenesis
loc04145  Phagocytosis
loc04148  Efferocytosis
loc05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:loc00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    102686954 (vps18)
   04142 Lysosome biogenesis
    102686954 (vps18)
   04140 Autophagy - animal
    102686954 (vps18)
   04148 Efferocytosis
    102686954 (vps18)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    102686954 (vps18)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:loc04131]
    102686954 (vps18)
Membrane trafficking [BR:loc04131]
 Endosome - Lysosome transport
  Tethering complex
   CORVET complex
    102686954 (vps18)
   Hops complex
    102686954 (vps18)
SSDB
Motif
Pfam: Pep3_Vps18 VPS18_solenoid_2nd VPS18_solenoid_1st VPS18_RING_C zf-RING_11 aq_1631 zf-ANAPC11 zf-RING_16 zf-RING_Vps41 zf-RING_2 DUF5600 LETM1_C zf-rbx1 DUF1664 KNOX2 DUF4446 RBSN_mid STX17_N zf_RING_Vps8_fungal zf-RING_5 zf-C3HC4_2
Other DBs
NCBI-GeneID: 102686954
NCBI-ProteinID: XP_006632494
Ensembl: ENSLOCG00000012325
UniProt: W5N3F6
LinkDB
Position
LG7:complement(14114901..14123939)
AA seq 979 aa
MASILDEYEDSQSIRHSMQKTTRLSASNIGITHSGFVNARLEEEKPIFNKQRIDFSPPEK
INHFAVCNNQLCMSLGKDTLLRIDLGKPDQPNQVELGRKDEAKVHKLFLDPTGAHLVISL
TSSECLYLNRNTQKVRSLSRWKGHLIESIAWNKLLGTETNTGPILAGTTQGLIFEAEISA
SEGASLFNTNPDQYFRQVHMLEEDGKPAPVCCLEIDRGFESKYFIIATTRKRLFQFVGKV
AEGAEQQGFSSIFSQNQDHFPSFQEFPVSMGYSEIAFYTPKLRTSPKSFAWMMGNGVLYG
NLDYGRPDSLLSDVEVWEYTPDIDFKFNKPISIVLTQFHFLLLLPDRVKAVCTLNGQVVY
EDVFPDKFGPLKRMIKDPVGSLVWIYTEKAVFRYHIQREARDVWQMYMSMNKFDRAKEYC
RDRPECMDIVLAKEAEHCFQNKKYLESAKCYALTQNYFEEIALKFIEAKQEEALKEFLIK
KLSILKSSEKTQITLLVTWLTELYLNRLGILEGDELKRVTFLEAREEFRKFLSSPKNKEC
LYNNRTTIYDLLASHGNVDDMVYFSVIMQDYERVVSHYCQHDDYEAALDVLSKHADEKLF
YKFSPVLMQHIPKKVVDAWIKMGKKLDAKQLIPALVNYSQIGSTEQINETIRYMEFCVYE
VTVTEEAIHNYLLSLYAKYKPECLLWYLEQAGTHSSEIHYDLKYALRLFAEHGHRQACVH
VYKIMELYEEAVDLALQVDVDLAKSCADLPEDDEELRKKLWLKIARHVVQEEKDVKKAMN
CLSSCNLLKIEDILPFFPDFVTIDHFKEAICNSLEEYNKHIEELKQEMEEATESAKRIRE
DIQEMRNKYGVVESQEKCAACDFPLLNRPFYLFLCSHMFHYDCLLQEVNPHLSTYKLTKL
EELQKKLLATSQPTKARHRQKEEDTISLGKGQPSREQIKSDIDDIIAAECVYCGELMIKS
IDKPFIDPQKYEDEKSSWL
NT seq 2940 nt   +upstreamnt  +downstreamnt
atggcttcaatacttgatgagtatgaggattcgcagagcatccgacactccatgcagaaa
actacccgcctctctgcctccaacatcggaattactcattcaggatttgtgaatgccagg
ttggaagaagagaagccaatatttaacaagcaaagaattgatttctctcctcctgagaag
attaaccattttgcagtctgtaataaccaactgtgtatgagtcttgggaaggacactttg
ctgaggattgatcttgggaagcctgatcaacctaatcaagttgaacttggacgtaaagat
gaagctaaagtacacaaactcttccttgatcctacaggtgcccatctggtgatcagtctg
acgtcaagcgagtgcctctacctaaacagaaatacccagaaagtgcgaagtttgtctcga
tggaaggggcacctaatagagagcattgcttggaacaagctactgggtacagagaccaac
acgggccccatcctagctggcactacccaggggctgatctttgaggccgaaatttcagct
tcggaaggagcaagccttttcaacacgaacccggaccagtatttccgacaggtgcacatg
ttggaagaagacggcaagccggcccctgtttgctgcttggagattgaccgcgggtttgaa
tcaaagtactttatcattgccaccacccgcaagcgcctgtttcagtttgtagggaaggta
gcggaaggtgccgagcagcagggcttcagctctattttcagtcaaaatcaggaccacttt
cccagctttcaggagttcccagtaagcatgggctacagcgagattgcattttacaccccc
aagctacgcacctccccaaaatcctttgcctggatgatggggaatggagtgttgtatggg
aatctggactatggacgccccgattctctgctgagtgatgtggaggtttgggaatatacc
cctgatattgatttcaaattcaacaagcccatatcaattgtcctgacacagttccatttt
ctccttctcctgccggatcgtgtgaaggctgtctgcactttgaatgggcaggttgtttac
gaagatgtctttccggacaaatttgggccattgaaaaggatgattaaagatcccgtgggc
agtctggtgtggatatacactgaaaaggcggtttttcgctatcacattcaaagagaggcg
cgagatgtctggcaaatgtacatgagcatgaacaagtttgacagggctaaagagtactgc
agggataggcctgaatgtatggacattgtcttggccaaagaagcagagcattgtttccag
aataagaaatacctggagagtgcaaagtgctatgcccttacacagaactattttgaagag
attgcactgaaattcattgaagccaaacaggaggaagccctcaaggagttccttataaag
aaactcagtatccttaagtccagtgagaagacccaaatcaccctgctggttacatggctg
actgaactgtacctcaacaggctggggattcttgaaggagatgaattgaaacgtgtcact
ttcttggaagcaagagaagagttccgcaagttcctaagcagtcccaaaaacaaagaatgc
ctgtacaacaatagaaccaccatatatgatctgttggccagccatggtaatgtagacgac
atggtgtacttctccgtcatcatgcaggactacgaacgagtcgtctcccactactgccag
catgatgactatgaggcagcactggatgtgttgtcgaagcacgcagacgagaaactgttc
tataagttctctcccgttctcatgcagcacatcccgaaaaaagttgtggatgcttggatc
aagatggggaaaaaactagatgccaagcagctcatccctgctctggttaattacagccag
attggcagcacggagcaaattaacgagaccatacgctacatggagttttgtgtgtatgaa
gtgactgtgacagaggaggcaatccacaactacctcctgtccctttatgctaaatacaaa
cctgaatgtttgctctggtatttggagcaggctggaactcactctagtgaaatccactat
gatctgaagtatgctctgcgtctgtttgcggagcacggccatcgccaggcctgtgttcac
gtttataagataatggaactttatgaagaagctgtggatctggcactgcaagtggatgta
gacctggccaagtcatgtgcagatctgccagaagacgatgaggagctgaggaagaaactt
tggttgaagatcgcccgtcatgtggttcaagaggaaaaagatgtcaagaaagccatgaac
tgcctgtccagctgcaatttgctgaagattgaggacattttgcctttcttccctgacttc
gtcaccatcgaccacttcaaggaggccatctgcaactccctggaggagtacaacaagcac
attgaggagctgaaacaagagatggaggaagccacagagagcgccaagcggatccgagag
gacatccaggagatgaggaacaagtatggtgtggtggagtcccaggagaaatgtgccgcc
tgcgatttccccctgctcaaccgcccattctacctcttcctctgcagccacatgtttcac
tatgactgcctcttgcaagaggtgaaccctcatctgtccacttacaagctaaccaaacta
gaggagctccagaaaaagctgttggctacgagccagcccaccaaagcccggcatcggcag
aaggaggaggacaccattagccttggaaaagggcagccgagtcgagagcagatcaagtcg
gacattgacgatataatagctgctgagtgcgtgtactgtggggagctgatgatcaaatcc
attgacaagccgttcattgacccacaaaagtatgaagacgaaaaatcaagctggctgtaa

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