KEGG   Lepisosteus oculatus (spotted gar): 102687026
Entry
102687026         CDS       T07349                                 
Symbol
tceb1
Name
(RefSeq) transcription elongation factor B polypeptide 1
  KO
K03872  elongin-C
Organism
loc  Lepisosteus oculatus (spotted gar)
Pathway
loc04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:loc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    102687026 (tceb1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:loc04121]
    102687026 (tceb1)
   03400 DNA repair and recombination proteins [BR:loc03400]
    102687026 (tceb1)
Ubiquitin system [BR:loc04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul2 complex
    Adoptor protein
     102687026 (tceb1)
   Cul5 complex
     102687026 (tceb1)
DNA repair and recombination proteins [BR:loc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     102687026 (tceb1)
SSDB
Motif
Pfam: Skp1_POZ
Other DBs
NCBI-GeneID: 102687026
NCBI-ProteinID: XP_006634042
Ensembl: ENSLOCG00000003689
UniProt: W5M7M3
LinkDB
Position
LG9:<4669321..4672545
AA seq 90 aa
SSDGHEFIVKREHALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVR
YTNSSTEIPEFPIAPEIALELLMAANFLDC
NT seq 273 nt   +upstreamnt  +downstreamnt
tcctccgatggccacgagttcatcgtgaagagagagcacgccttgacctctggcaccatc
aaagccatgctgagcggcccaggtcagtttgctgaaaacgaaaccaatgaagtcaatttc
agggagatcccatctcatgttctttccaaagtgtgtatgtactttacctataaagtccgt
tacaccaacagctcaacagaaatcccagagtttcccattgcaccagagatagcactggag
ctcctgatggctgcaaacttcttagattgttga

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