Lepisosteus oculatus (spotted gar): 102687053
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Entry
102687053 CDS
T07349
Symbol
ddx55
Name
(RefSeq) ATP-dependent RNA helicase DDX55
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
loc
Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
loc03009
]
102687053 (ddx55)
Enzymes [BR:
loc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102687053 (ddx55)
Ribosome biogenesis [BR:
loc03009
]
Eukaryotic type
Pre-60S particles
Helicases
102687053 (ddx55)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Helicase_C_2
SBF_like
CTT_SPB4
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
102687053
NCBI-ProteinID:
XP_006640446
Ensembl:
ENSLOCG00000005828
UniProt:
W5MF80
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All DBs
Position
LG20:7706485..7714421
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AA seq
600 aa
AA seq
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MENVTEGGWDTLPVKLHQSILQTLSELRFTHMTPVQAACIPLFMNNKDVAAEAVTGSGKT
LAFVIPILQILLKREEKLKKMQVGALIVTPTRELATQISEVMGHFIQHFPQFRQILLIGG
SNPIEDVEKFKAQGGNIVIGTPGRLEDMFRRKADGLDLASCVKTLDVLVLDEADRLLDMG
FEASLNAILGYLPKQRRTGLFSATQTQELEKLVRAGLRNPVRITVKEKGAAASSVQKTPA
RLHNYYTVCRTEEKFNMLVAFLRQHKHGKHLVFFSTCACVEYYGRALEALVKNVKVLCIH
GKMKDKRHKIFKEFRDLKSGILVCTDVMARGIDIPEVNWVLQYDPPSSASAFVHRCGRTA
RIGHQGSALVFLLPMEESYVTFLSINQKCPLQEMAPVKDVVDVLPKLKAMARADRAVFER
GMRAFVSCIQAYAKHECSLIFRVKDLDFSALARGFALLRLPKMPELRGKAFPDFTPDPID
TDSIPYKDKNRQRQRRKMLAEQKEREQAQPVRKIFVKNKAWSKQKSKNDRRKKVAAKRKR
EEGSDIEDEDMDELLSDTRLLKKLKKGKISEEDFEKQVTAARVSQSKTAGKQQEEDSETD
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggagaatgtgacggaaggtggatgggacactttacctgttaaattgcaccaaagtatt
ttacagactcttagtgaactgagatttactcacatgacgccagtccaggctgcttgcatc
ccactgtttatgaacaacaaagatgttgctgcagaggcggtcaccgggagcggaaagact
ttagcctttgtcattcccatcctgcagatactgctaaaaagagaggagaaactcaagaaa
atgcaggttggcgcactgattgtcacgcccacgcgtgagttggccacgcagatcagtgag
gtgatgggacatttcatccagcacttccctcagttcagacaaatacttctaatcggagga
agtaatcctatagaagatgtggagaaatttaaagcgcaggggggcaacatcgtgatcggc
acgccagggaggctggaggacatgttccggaggaaggcggacggcctggacctggccagc
tgcgtcaagactctggacgtcctggtgctggacgaggccgacaggctgctggacatgggc
ttcgaagcgagcctgaacgccatcctggggtacctgcccaagcagcggcgtacggggctg
ttctccgccacgcagacccaggagctggagaagctggtgagggccgggctgcgcaaccct
gtgcgcatcaccgtcaaggagaagggcgcggcggccagcagcgtgcagaagacccccgcc
aggctgcacaactactacactgtctgcaggacagaggagaagttcaacatgctggtggct
ttcctccgtcagcacaagcacgggaagcacctggtgttcttcagcacctgcgcctgtgta
gagtattatggaagagccctggaagctttggttaaaaatgtcaaggtgctctgtatccac
ggaaagatgaaggataagcgtcataaaatttttaaagagtttcgggacctgaaaagtggg
atcctggtgtgcacagacgtcatggccagagggattgacattcccgaggtcaactgggtc
ttacagtacgacccccccagcagtgccagtgcctttgtgcatcgctgtgggcgtaccgcc
cgcatcggccaccagggcagcgctctcgtcttcctcctccccatggaagagtcttacgtc
actttcctgtccatcaaccagaaatgccccctccaggagatggccccggtgaaggatgtg
gtcgatgtcctgcccaagctgaaggccatggcgcgggcggacagggcggtgttcgagagg
gggatgagggcgttcgtctcctgcattcaggcgtacgccaagcacgagtgcagcctcatc
ttcagggtcaaagatctggacttctctgctctggcgcgggggtttgctttgctgaggctg
cccaagatgcccgagctgaggggcaaggctttcccggacttcacccccgaccccatcgac
acggactccatcccgtacaaggacaagaaccggcagaggcagaggaggaagatgctggcg
gagcagaaggaaagggagcaagctcagcccgtcaggaagatcttcgtcaagaacaaagcc
tggtccaaacagaaaagcaagaatgacaggaggaaaaaggtggcggccaaaagaaagaga
gaggagggctcagacattgaagacgaagacatggatgagctgctcagcgacaccagactg
ctgaagaagctcaagaagggcaagatcagcgaggaggactttgagaagcaagtgacagct
gcgcgtgtttcacagtccaaaacggcaggcaagcaacaagaggaagattcagagacagac
taa
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