Lepisosteus oculatus (spotted gar): 102687108
Help
Entry
102687108 CDS
T07349
Symbol
tfip11
Name
(RefSeq) tuftelin-interacting protein 11
KO
K13103
tuftelin-interacting protein 11
Organism
loc
Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
loc03041
]
102687108 (tfip11)
Spliceosome [BR:
loc03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
102687108 (tfip11)
Other components
Complex C specific factors
102687108 (tfip11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
102687108
NCBI-ProteinID:
XP_006640362
Ensembl:
ENSLOCG00000008684
LinkDB
All DBs
Position
LG20:14715437..14722007
Genome browser
AA seq
828 aa
AA seq
DB search
MSLSHLYGRGGEEEEEGVEVERFEVTDWDLENEFNPDRRRHRQTKEEATYGVWAERDSDD
ERPSFGGKRSRDYTAPVSFVSAGLRKSAAEEREQEGSDDSEPEADPPQAPPRESAPRRLQ
TGGNFKSSQRAFGSGTRGGQDLGTWEKHTRGIGQKLLQKMGYVPGKGLGKNAQGIVNPIE
AKVRKGKGAVGAYGTERTQQSLQDFPIVDSEEEEEKDFQRELGQWRRDPGAGKKKPKYSY
RTVDELKARGQAVGKSMTAPPAELAQVKVIDMTGREQKVYYSYSQMSQKHSVPEEPSLGA
APKDQRSPGFALPELEHNLQLLIDLTEQDILQSARRLQHERDMVVSLSHESAALEETLKQ
ERVALGRLEHVLELVEKSEEGQGQDGPLTLEECAHIFEKLQSDYYQEYKMLGLADLAAAV
VHPLLREELRGWDPLKDGTRGLEEVGRWRAVLESGQLPHSRADNQLMDPYHRLLWEVWVP
LVRSAVSQWQPRNVGPMVDFLDSWAPLLPIWILDNILETLIFPKLQREVESWNPLTDTVP
IHSWLHPWLPLLQGRLEPLYPPIRSKLASALQRWHPSDGSARLILQPWKDVFTPGAWEAF
MVKNIVPKLALCLSELVVNPHQQLMDPLYWVLDWEGMLSLSCLVSLLDKHFFPKWLQVLC
SWLSNSPNYEEITRWYLGWKSVFSDAVLAQPVIKEKFNEALDIMNRAVSSGIGVYQQPGA
RENIAYLTHTERRKDFQYEALQERREAESVAQRGIGAAAVPTNFKDLIQAKAEEHNIVFM
PLVGKRHEGKQLYTFGRIVIYIDRGVVFVQGEKTWVPTSLQSLIDMAR
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgtcccacctgtacgggagggggggcgaggaggaggaggagggtgtggaggtc
gagcgcttcgaggtgacggattgggacttagagaacgagttcaaccccgaccggcgccgg
caccgccagaccaaagaggaggcgacatacggcgtgtgggccgagcgcgactccgatgac
gagcgacccagctttggtgggaagaggtccagggactacactgcacctgtcagcttcgtg
agcgcggggctccggaagagcgcggccgaggagagagaacaggagggatctgacgactca
gaaccagaggcagaccctccccaggcgcccccccgggagtcagcgcccagaaggctgcag
acgggggggaactttaagagctcccagagggcatttggcagtggcactcgtggtgggcag
gacctgggcacctgggagaaacacacccgtggaattgggcagaaactgctgcagaagatg
ggctacgtgccaggcaaagggctgggcaagaatgcacagggtattgtgaaccccattgag
gctaaggtgcgcaagggcaagggggcagtgggagcttatggcacagagaggacccagcag
tccctgcaggacttccccatcgtggattctgaggaagaggaggaaaaggacttccagcgg
gagctgggccagtggcgcagagacccaggggctgggaagaagaagcccaaatactcgtac
cgaacggtggacgagctgaaggcccgggggcaggcggtgggcaagagcatgactgcgccc
cctgcggagctggcccaggtcaaggtgattgatatgacaggccgtgagcagaaggtctat
tacagctacagtcagatgagccagaagcacagtgttccagaggagccgtcccttggtgcc
gcccccaaggaccagcggagtcctggcttcgcacttcctgagctggagcacaacttgcag
ctgctgattgacctcacggagcaggatattctacagagcgcacgaaggcttcagcacgag
cgggacatggtggtgtctctgtctcatgagagcgccgccctagaggagacactgaagcag
gagcgtgttgccctggggcggctggagcacgtgctcgagctggttgagaaaagcgaggag
ggccagggccaggatgggccgctcacgctggaggagtgtgcgcatatcttcgagaagctg
cagtccgactactatcaggagtacaagatgctcggcctcgctgacctcgctgctgccgtg
gtccatcccctgctcagggaggaattacgtggctgggaccccctcaaggatgggacacgg
gggctggaggaggttggccgctggagggcagtgttggagtcaggacagctgccccacagc
cgagcagataaccagctcatggacccctaccacaggttgctgtgggaggtgtgggtgccc
ctggtgcgcagtgctgtgtcacagtggcagccccgtaacgtcggccccatggtggacttt
ttggatagctgggcacctctactgcccatctggatcctggacaacatcctggagacgctc
atcttccccaagctgcagagggaggtggagagctggaacccactgacagacacggtgccc
atccactcctggctgcacccctggctgcccctcctgcaggggcgcttggagcctctgtac
cccccaatccgaagcaagctggcgagcgccctgcagcgctggcaccccagcgacggatct
gcccgcctcatcctgcagccctggaaggacgtcttcacgccaggcgcctgggaggccttc
atggtgaagaacatcgtccccaaactggcactctgtctcagcgaactggtcgtgaacccc
caccagcagctcatggaccccctgtactgggtactggactgggagggaatgctgtcgctg
tcctgcctggtcagcctgctggacaagcacttcttccccaagtggctacaggtgctgtgc
tcctggctcagtaacagtccgaactacgaggagatcacacgctggtacctgggctggaag
tctgtcttttccgacgctgttcttgcacaaccagtcatcaaggagaagttcaacgaggcg
ctggacatcatgaaccgcgcagtttcctctggcattggtgtgtaccagcaacctggggcc
agggagaacatcgcgtacctgacacacactgagcgccgcaaggacttccagtacgaggcg
ctgcaggagcgccgggaggcggagagcgtggcgcagaggggcatcggggccgcggccgtg
ccaaccaacttcaaggacctaatccaggccaaagccgaggagcacaacatcgtctttatg
cccctggtggggaagcgccacgagggcaagcagctgtacactttcgggcgcattgtcatc
tacatcgaccgtggcgtggtgttcgtgcagggggagaagacctgggtgcccacctccctg
cagagcctcattgacatggccaggtga
DBGET
integrated database retrieval system