Lepisosteus oculatus (spotted gar): 102687195
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Entry
102687195 CDS
T07349
Symbol
itgb1
Name
(RefSeq) integrin beta-1 isoform X2
KO
K05719
integrin beta 1
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc03271
Virion - Rotavirus
loc04145
Phagosome
loc04510
Focal adhesion
loc04512
ECM-receptor interaction
loc04514
Cell adhesion molecules
loc04530
Tight junction
loc04810
Regulation of actin cytoskeleton
loc04820
Cytoskeleton in muscle cells
loc05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
102687195 (itgb1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102687195 (itgb1)
04514 Cell adhesion molecules
102687195 (itgb1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
102687195 (itgb1)
09144 Cellular community - eukaryotes
04510 Focal adhesion
102687195 (itgb1)
04530 Tight junction
102687195 (itgb1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
102687195 (itgb1)
04810 Regulation of actin cytoskeleton
102687195 (itgb1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
102687195 (itgb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
loc04131
]
102687195 (itgb1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
loc04147
]
102687195 (itgb1)
04515 Cell adhesion molecules [BR:
loc04515
]
102687195 (itgb1)
04090 CD molecules [BR:
loc04090
]
102687195 (itgb1)
Membrane trafficking [BR:
loc04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
102687195 (itgb1)
Exosome [BR:
loc04147
]
Exosomal proteins
Proteins found in most exosomes
102687195 (itgb1)
Cell adhesion molecules [BR:
loc04515
]
Integrins
Integrin beta subunits
102687195 (itgb1)
CD molecules [BR:
loc04090
]
Proteins
102687195 (itgb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
EGF_integrin
PSI_integrin
I-EGF_1
EGF_2
vWA_SIBA-E
RBP_receptor
Motif
Other DBs
NCBI-GeneID:
102687195
NCBI-ProteinID:
XP_006642942
Ensembl:
ENSLOCG00000000819
UniProt:
W5LXS4
LinkDB
All DBs
Position
Unknown
AA seq
803 aa
AA seq
DB search
MRFKMDLKLLFISTLIGCLCYSSAQQEGNECIKANAKSCGECIQVGEKCGWCTQPDFLKQ
GEPTSARCDELESLKKRCQATLIENPRGGQRVLQNKTVTDRSKPGSKKLKPEEITQIQPQ
KISLDLRSGEAQSFKLKFKRAEDYPIDLYYLMDLSFSMKDDLENVKNLGTSLMNEMSKIT
SDFRIGFGSFVEKTVMPYISTTPAKLLNPCTGENNCTSPFSYKNVLKLTSDGKQFNTLVG
QQQISGNLDSPEGGFDAIMQVAVCGEHIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPN
DGRCHLENNMYTMSHYYDYPSIAHLVQKLSDNNIQTIFAVTEEFQPVYRELKNLIPKSAV
GTLSANSSNVINLIIDAYNSLSSEVILENSKLPDGVSIKYVSHCKNGNVGEGENGRKCSN
ISIGDEVTFNISITAHKCPKNGQKNETIKIKPLGFTEEVEIVLNFICECQCHDAGVPNSP
LCNNGNGTFECGACRCNEGRIGRQCECSTEEVNSDDLDANCRKDNGTDICSTNGDCICGE
CVCKKRENPAEIYSGKYCECDNFNCDRSNNQICGGHGDCVCRVCVCHPNYTGSACDCSLD
NTTCLASNKQICNGRGICECGTCKCTDPKFQGPTCEICPTCPGVCTEHKDCVHCMAFKTG
EEKEKCEKDCNYFTLIKVQDRDKLPQPVQSFPLMHCKERDANDCWFYYTYAVNNNSEKIV
HVVEKLECPAGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKW
DTGENPIYKSAVTTVVNPKYEGK
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgcgttttaagatggatctaaagctactttttatatcaacactaataggatgcctgtgt
tacagcagtgcccagcaagagggaaatgaatgtataaaggccaacgccaaatcctgtggg
gaatgtattcaagttggagagaaatgtggatggtgcacccagcccgacttcttaaaacaa
ggagagccgacctctgccaggtgtgacgagctggagtccctgaagaagcgctgtcaagct
actctgattgagaacccccggggtggtcagagggtgttgcagaacaagaccgtcactgac
cggagtaagccgggctcaaagaagctgaagccagaggagatcactcagattcagcctcag
aagatatccttggacttacgatccggtgaagcccagtcctttaagctgaagttcaaaaga
gcagaagactatcctattgatctctattatcttatggacctgtctttctccatgaaagat
gatctggaaaatgtcaaaaacctgggaacaagtctgatgaatgaaatgtcaaaaattact
tctgattttagaattggttttgggtcctttgtggagaagactgttatgccatacataagt
acgactccagccaagctactgaatccttgtactggagaaaataattgcactagtcctttc
agctataagaacgtgctcaaactcaccagtgatgggaagcagttcaatactcttgtaggg
cagcagcaaatttctggaaacctggattctcctgaaggaggttttgatgccataatgcaa
gttgctgtctgtggtgagcacattggctggaggaatgtcacccgtctgctggtgttctcc
actgacgctgggttccacttcgccggagatggaaaactgggaggaattgttttgccaaat
gatggaaggtgtcacctggagaataacatgtacacgatgagtcactactatgactacccc
tcaattgctcacctggttcagaaattgagtgacaacaatattcaaacaatctttgcggtc
actgaagaattccaacctgtctacagggaactgaagaaccttattccaaagtctgcagta
ggaaccctgtctgccaactccagcaatgttatcaatctgatcattgatgcttataattct
ctgtcttcagaagtcatccttgagaacagcaagttgccagatggggtatcgattaagtat
gtgtcgcactgcaagaacgggaacgttggtgaaggggaaaacggacgaaaatgttcaaat
atttccattggagacgaggtgacgttcaacataagcatcaccgctcacaagtgtccaaaa
aatggccagaaaaacgaaaccatcaagatcaagcccctgggctttacggaggaggtggaa
attgttcttaattttatctgcgagtgccagtgtcacgatgctggagtgcccaacagcccc
ctgtgcaataatggcaatgggacctttgagtgtggggcatgcaggtgcaacgaaggccgc
atcggcaggcagtgcgagtgcagcacggaagaggtcaacagcgacgatctggacgccaac
tgccggaaggacaacggcacggacatctgcagcaccaacggcgactgcatctgcggggag
tgtgtgtgtaagaagagggagaacccggccgagatctactcgggcaaatactgcgagtgt
gacaacttcaactgcgacaggtccaacaaccagatctgtgggggacacggtgactgtgtc
tgtagggtgtgcgtatgccaccccaattacactggcagtgcctgcgactgctcactggac
aacaccacatgcctggcatccaataagcagatctgcaatggcagagggatatgtgaatgt
ggtacctgcaagtgcacagatcccaaattccaggggcccacctgcgagatatgcccgaca
tgccctggggtttgcacggagcacaaggactgtgtgcactgcatggctttcaagacgggc
gaggagaaggagaagtgcgagaaggactgcaactatttcaccctcatcaaggtgcaggac
cgcgataagctgccccagcctgtccagtctttccccctcatgcactgcaaagagagggac
gccaatgactgctggttctattacacctatgccgtcaacaacaactctgaaaaaatagtc
catgtggttgagaaactagagtgccccgcgggccccgacatcatccccatcgtggccggc
gtggtggcagggatcgtgctcataggcctcgccctcctgctcatctggaagctgctcatg
atcatccatgaccgcagggagttcgccaagttcgagaaggaaaagatgaacgccaagtgg
gatacgggtgaaaatcccatctataagagtgcggtaacaactgtggtcaatcctaaatac
gagggaaaatga
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integrated database retrieval system
